FC931644

Overview
NameFC931644
Unique NameFC931644
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15105 contig Ccv1_Contig15105:214..901. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK2_SOLLC (S-adenosylmethionine synthetase 2 OS=Solanum lycopersicum GN=SAM2 PE=2 SV=1)

HSP 1 Score: 419.468 bits (1077), Expect = 8.391e-117
Identity = 201/217 (92.63%), Postives = 210/217 (96.77%), Query Frame = 3 
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ETCTKTNLVMVFGEITTKAN++YEKIVRDTCR IGFVS DVGLDADNC+VLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEY+N+NGAMVP+RVHTVLISTQHDETVTNDEIA DLKEHVIKPVIPEKYLDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY
Sbjct:   43 ETCTKTNLVMVFGEITTKANIDYEKIVRDTCREIGFVSPDVGLDADNCRVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCSWLRPDGKTQVTVEYHNDNGAMVPLRVHTVLISTQHDETVTNDEIARDLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 259
[Close]
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_BRARP (S-adenosylmethionine synthetase OS=Brassica rapa subsp. pekinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 419.083 bits (1076), Expect = 1.096e-116
Identity = 199/217 (91.71%), Postives = 210/217 (96.77%), Query Frame = 3 
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ETCTKTN+VMVFGEITTKA V+YEKIVRDTCR+IGF+SDDVGLDAD CKVLV IEQQSPDIAQGVHGH +KRPE+IGAGDQGHMFGYATDETPE MPLSHVLAT++GAKLTEVRKNGTC WLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETVTNDEIA DLKEHVIKP+IPEKYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY
Sbjct:   43 ETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIARDLKEHVIKPIIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 259
[Close]
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK5_BRAJU (S-adenosylmethionine synthetase 5 OS=Brassica juncea GN=MSAMS5 PE=2 SV=1)

HSP 1 Score: 419.083 bits (1076), Expect = 1.096e-116
Identity = 199/217 (91.71%), Postives = 210/217 (96.77%), Query Frame = 3 
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ETCTKTN+VMVFGEITTKA V+YEKIVRDTCR+IGF+SDDVGLDAD CKVLV IEQQSPDIAQGVHGH +KRPE+IGAGDQGHMFGYATDETPE MPLSHVLAT++GAKLTEVRKNGTC WLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETVTNDEIA DLKEHVIKP+IPEKYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY
Sbjct:   43 ETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIARDLKEHVIKPIIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 259
[Close]
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 417.542 bits (1072), Expect = 3.189e-116
Identity = 198/217 (91.24%), Postives = 211/217 (97.24%), Query Frame = 3 
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ETCTKTN+VMVFGEITTK N++YEKIVRDTCR+IGF S+DVGLDAD+CKVLV IEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVTVEY N++GAM+PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE+YLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY
Sbjct:   44 ETCTKTNMVMVFGEITTKGNIDYEKIVRDTCRDIGFTSEDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYRNDHGAMIPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 260
[Close]
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 417.542 bits (1072), Expect = 3.189e-116
Identity = 198/217 (91.24%), Postives = 212/217 (97.70%), Query Frame = 3 
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ETCTKTN+VMVFGEITTKAN++YEKIVRDTCR+IGFVS DVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPE++GAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEY N+NGAMVP+RVHTVLISTQHDETVTN++IAADLKEHVIKPVIPEKYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY
Sbjct:   43 ETCTKTNMVMVFGEITTKANIDYEKIVRDTCRSIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEDVGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYNNDNGAMVPIRVHTVLISTQHDETVTNEQIAADLKEHVIKPVIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 259
[Close]
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK2_ARATH (S-adenosylmethionine synthetase 2 OS=Arabidopsis thaliana GN=SAM2 PE=1 SV=1)

HSP 1 Score: 417.542 bits (1072), Expect = 3.189e-116
Identity = 197/217 (90.78%), Postives = 210/217 (96.77%), Query Frame = 3 
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ETCTKTN+VMVFGEITTKA ++YEKIVRDTCR+IGF+SDDVGLDAD CKVLV IEQQSPDIAQGVHGH +KRPE+IGAGDQGHMFGYATDETPE MPLSHVLAT++GA+LTEVRKNGTC WLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETVTNDEIA DLKEHVIKP+IPEKYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY
Sbjct:   43 ETCTKTNMVMVFGEITTKATIDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGARLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIARDLKEHVIKPIIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 259
[Close]
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK2_ORYSJ (S-adenosylmethionine synthetase 2 OS=Oryza sativa subsp. japonica GN=SAM2 PE=2 SV=1)

HSP 1 Score: 416.387 bits (1069), Expect = 7.104e-116
Identity = 201/217 (92.63%), Postives = 208/217 (95.85%), Query Frame = 3 
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ETCTKTN+VMVFGEITTKA V+YEKIVRDTCR IGFVSDDVGLDAD CKVLV IEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEY N+ GAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP+KYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY
Sbjct:   45 ETCTKTNMVMVFGEITTKATVDYEKIVRDTCRGIGFVSDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYLNDAGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPDKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 261
[Close]
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK1_TRIMO (S-adenosylmethionine synthetase 1 OS=Triticum monococcum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 416.001 bits (1068), Expect = 9.278e-116
Identity = 201/217 (92.63%), Postives = 208/217 (95.85%), Query Frame = 3 
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ETCTKTN+VMVFGEITTKA V+YEKIVRDTCRNIGF+SDDVGLDAD CKVLV IEQQSPDIAQGVHGH +KRPE+IGAGDQG MFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEY NE GAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY
Sbjct:   45 ETCTKTNMVMVFGEITTKATVDYEKIVRDTCRNIGFISDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGIMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYLNEGGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 261
[Close]
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK1_ORYSJ (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. japonica GN=SAM1 PE=2 SV=1)

HSP 1 Score: 416.001 bits (1068), Expect = 9.278e-116
Identity = 201/217 (92.63%), Postives = 210/217 (96.77%), Query Frame = 3 
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ETCTKTN+VMVFGEITTKANV+YEKIVR+TCRNIGFVS DVGLDAD+CKVLV IEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEY NE+GA VPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE+YLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY
Sbjct:   46 ETCTKTNMVMVFGEITTKANVDYEKIVRETCRNIGFVSADVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYRNESGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 262
[Close]
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK1_ORYSI (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. indica GN=SAM1 PE=2 SV=2)

HSP 1 Score: 416.001 bits (1068), Expect = 9.278e-116
Identity = 201/217 (92.63%), Postives = 210/217 (96.77%), Query Frame = 3 
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ETCTKTN+VMVFGEITTKANV+YEKIVR+TCRNIGFVS DVGLDAD+CKVLV IEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEY NE+GA VPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE+YLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY
Sbjct:   46 ETCTKTNMVMVFGEITTKANVDYEKIVRETCRNIGFVSADVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYRNESGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 262
The following BLAST results are available for this feature:
BLAST of FC931644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_SOLLC8.391e-11792.63S-adenosylmethionine synthetase 2 OS=Solanum lycop... [more]
METK_BRARP1.096e-11691.71S-adenosylmethionine synthetase OS=Brassica rapa s... [more]
METK5_BRAJU1.096e-11691.71S-adenosylmethionine synthetase 5 OS=Brassica junc... [more]
METK_MUSAC3.189e-11691.24S-adenosylmethionine synthetase OS=Musa acuminata ... [more]
METK2_SUASA3.189e-11691.24S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK2_ARATH3.189e-11690.78S-adenosylmethionine synthetase 2 OS=Arabidopsis t... [more]
METK2_ORYSJ7.104e-11692.63S-adenosylmethionine synthetase 2 OS=Oryza sativa ... [more]
METK1_TRIMO9.278e-11692.63S-adenosylmethionine synthetase 1 OS=Triticum mono... [more]
METK1_ORYSJ9.278e-11692.63S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]
METK1_ORYSI9.278e-11692.63S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionC34107D11EF PostHarvP1 Citrus clementina cDNA clone C34107D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931644 ID=FC931644; Name=FC931644; organism=Citrus clementina; type=EST; length=688bp
GTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCACA
ACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCAA
CATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAGG
TTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCAT
GGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGCA
TATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGTC
ATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAAT
GGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTGA
GTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTTT
TGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGCT
GATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTGA
TGAGAAGACTATCTTCCATCTTAACCCATCCGGTCGTTTTGTGATTGGTG
GGCCTCATGGTGACGCTGGTTTGACCGGCCGCAAGATCATTATCGATACT
TATGGTGGTTGGGGAGCTCACGGTGGTGGTGCATTCTC
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