FC931644

Overview
NameFC931644
Unique NameFC931644
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15105 contig Ccv1_Contig15105:214..901. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_DICDI (S-adenosylmethionine synthetase OS=Dictyostelium discoideum GN=metK PE=1 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 2.159e-80
Identity = 147/218 (67.43%), Postives = 173/218 (79.36%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSK-RPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET TKT +VM+ GEITTKANV+Y+K+VR+  + IG+     G D   C VLV IEQQSPDIAQGVH  + K  PE+IGAGDQGHMFGYAT+ETP  MPL+H LA++L  KLTE+R NGT  W RPD KTQVTVEY  E   + PVRVHT++ISTQHDE VTN++I ADLKE VIK V+P +YLD+ TI+HLNPSGRFVIGGP GD+GLTGRKIIID+Y
Sbjct:   43 ETATKTGMVMILGEITTKANVDYQKVVREAVKKIGYDDSSKGFDYKTCNVLVAIEQQSPDIAQGVH--IGKVNPEDIGAGDQGHMFGYATNETPTLMPLTHFLASELVNKLTELRHNGTLAWARPDAKTQVTVEYKKEGHKITPVRVHTIVISTQHDEKVTNEQIRADLKELVIKAVVPAQYLDDNTIYHLNPSGRFVIGGPMGDSGLTGRKIIIDSY 258          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_ACACA (S-adenosylmethionine synthetase OS=Acanthamoeba castellanii GN=metK PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.185e-78
Identity = 139/217 (64.06%), Postives = 171/217 (78.80%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET +KT +VMVFGEITTK++ +Y+K++R+T + IGF    +G D   C +LV IEQQSPDIAQGVH  + +  +++GAGDQGHMFG+AT+ETPEFMP++HVLAT+L  ++TEVR N    W+RPD KTQVTVEY NENG ++P+R HTV+IS QH E VTN+EI   L E VIKP IP   LD +TIFHLNPSGRFVIGGP G+AGLTG KIIIDTY
Sbjct:   46 ETASKTGMVMVFGEITTKSSFDYQKVIRETVKRIGFTDSSIGFDYKTCNILVAIEQQSPDIAQGVH--VGRSDDDLGAGDQGHMFGHATNETPEFMPMTHVLATRLCQRMTEVRNNSILSWMRPDAKTQVTVEYRNENGTLIPLRRHTVVISVQHSEDVTNEEIRKRLMEEVIKPSIPAHLLDGETIFHLNPSGRFVIGGPQGEAGLTGGKIIIDTY 260          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK2_PONAB (S-adenosylmethionine synthetase isoform type-2 OS=Pongo abelii GN=MAT2A PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 7.187e-76
Identity = 138/217 (63.59%), Postives = 169/217 (77.88%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET  KT ++++ GEIT++A V+Y+K+VR+  ++IG+     G D   C VLV +EQQSPDIAQGVH  L +  E+IGAGDQG MFGYATDET E MPL+ VLA +L AKL E+R+NGT PWLRPD KTQVTV+Y  + GA++P+RVHT++IS QHDE V  DE+   LKE VIK V+P KYLDE TI+HL PSGRFVIGGP GDAGLTGRKII+DTY
Sbjct:   57 ETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH--LDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTY 271          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK2_MACFA (S-adenosylmethionine synthetase isoform type-2 OS=Macaca fascicularis GN=MAT2A PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 7.187e-76
Identity = 138/217 (63.59%), Postives = 169/217 (77.88%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET  KT ++++ GEIT++A V+Y+K+VR+  ++IG+     G D   C VLV +EQQSPDIAQGVH  L +  E+IGAGDQG MFGYATDET E MPL+ VLA +L AKL E+R+NGT PWLRPD KTQVTV+Y  + GA++P+RVHT++IS QHDE V  DE+   LKE VIK V+P KYLDE TI+HL PSGRFVIGGP GDAGLTGRKII+DTY
Sbjct:   57 ETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH--LDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTY 271          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK2_HUMAN (S-adenosylmethionine synthetase isoform type-2 OS=Homo sapiens GN=MAT2A PE=1 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 7.187e-76
Identity = 138/217 (63.59%), Postives = 169/217 (77.88%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET  KT ++++ GEIT++A V+Y+K+VR+  ++IG+     G D   C VLV +EQQSPDIAQGVH  L +  E+IGAGDQG MFGYATDET E MPL+ VLA +L AKL E+R+NGT PWLRPD KTQVTV+Y  + GA++P+RVHT++IS QHDE V  DE+   LKE VIK V+P KYLDE TI+HL PSGRFVIGGP GDAGLTGRKII+DTY
Sbjct:   57 ETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH--LDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTY 271          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK2_MOUSE (S-adenosylmethionine synthetase isoform type-2 OS=Mus musculus GN=Mat2a PE=2 SV=2)

HSP 1 Score: 283.108 bits (723), Expect = 9.386e-76
Identity = 137/217 (63.13%), Postives = 169/217 (77.88%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET  KT ++++ GEIT++A ++Y+K+VR+  ++IG+     G D   C VLV +EQQSPDIAQGVH  L +  E+IGAGDQG MFGYATDET E MPL+ VLA +L AKL E+R+NGT PWLRPD KTQVTV+Y  + GA++P+RVHT++IS QHDE V  DE+   LKE VIK V+P KYLDE TI+HL PSGRFVIGGP GDAGLTGRKII+DTY
Sbjct:   57 ETVAKTGMILLAGEITSRAAIDYQKVVREAIKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH--LDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEVCLDEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTY 271          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK2_RAT (S-adenosylmethionine synthetase isoform type-2 OS=Rattus norvegicus GN=Mat2a PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.226e-75
Identity = 136/217 (62.67%), Postives = 169/217 (77.88%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET  KT ++++ GEIT++A ++Y+K+VR+  ++IG+     G D   C VLV +EQQSPDIAQGVH  L +  E+IGAGDQG MFGYATDET E MPL+ VLA +L AKL E+R+NGT PWLRPD KTQVTV+Y  + GA++P+RVHT++IS QHDE V  DE+   LKE +IK V+P KYLDE TI+HL PSGRFVIGGP GDAGLTGRKII+DTY
Sbjct:   57 ETVAKTGMILLAGEITSRAAIDYQKVVREAIKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH--LDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVIPIRVHTIVISVQHDEEVCLDEMRDALKEKLIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTY 271          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_ASCIM (S-adenosylmethionine synthetase OS=Ascobolus immersus PE=3 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 5.694e-73
Identity = 129/217 (59.45%), Postives = 167/217 (76.96%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET TKT ++MVFGEITTKA+++Y+KI+R+  ++IG+     G D   C VLV IEQQSPDIAQG+H    K  EE+GAGDQG MFGYATDETPE +PL+ +LA QL A + + R++G+ PWLRPD KTQVT+EY ++ GA+VP +V TV++S QH E +T +E+  ++ E +IK  IP KYLDE T+FH+ PSG F+IGGP GDAGLTGRKII+DTY
Sbjct:   53 ETATKTGMIMVFGEITTKAHLDYQKIIRNAVKDIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGLH--YEKALEELGAGDQGIMFGYATDETPELLPLTLLLAHQLNANMAKARRDGSLPWLRPDTKTQVTIEYEHDGGAVVPKKVKTVVVSAQHSEDITTEELRKEILEKIIKTTIPAKYLDEDTVFHIQPSGLFIIGGPQGDAGLTGRKIIVDTY 267          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK1_HUMAN (S-adenosylmethionine synthetase isoform type-1 OS=Homo sapiens GN=MAT1A PE=1 SV=2)

HSP 1 Score: 271.937 bits (694), Expect = 2.164e-72
Identity = 128/217 (58.99%), Postives = 169/217 (77.88%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET  KT +V++ GEIT+ A V+Y+++VRDT ++IG+     G D   C VLV +EQQSPDIAQ VH  L +  E++GAGDQG MFGYATDET E MPL+ +LA +L A++ ++R++G  PWLRPD KTQVTV+Y  +NGA++PVR+HT++IS QH+E +T +E+   LKE VI+ V+P KYLDE T++HL PSGRFVIGGP GDAG+TGRKII+DTY
Sbjct:   57 ETVCKTGMVLLCGEITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVH--LDRNEEDVGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYMQDNGAVIPVRIHTIVISVQHNEDITLEEMRRALKEQVIRAVVPAKYLDEDTVYHLQPSGRFVIGGPQGDAGVTGRKIIVDTY 271          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_SCHPO (S-adenosylmethionine synthetase OS=Schizosaccharomyces pombe GN=sam1 PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 3.691e-72
Identity = 123/217 (56.68%), Postives = 171/217 (78.80%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET +KT +VMVFGEITT++ ++Y+K++R+T ++IG+   + G D   C VLV IEQQSPDIAQG+H    K  EE+GAGDQG MFGYATDETPE +PL+ +LA +L A ++  R++G+ PWLRPD KTQVT+EY  ENGA++P RV T+++S QH ++++ +++ +++ E +IKP +P   LDEKT++H+ PSGRFV+GGP GDAGLTGRKII+DTY
Sbjct:   44 ETASKTGMVMVFGEITTRSQIDYQKVIRNTIKSIGYDDSEKGFDYKTCNVLVAIEQQSPDIAQGLH--YEKALEELGAGDQGIMFGYATDETPEKLPLTILLAHKLNAAMSVARRDGSLPWLRPDTKTQVTIEYEEENGAVIPRRVDTIVVSAQHADSISTEDLRSEILEKIIKPTVPAHLLDEKTVYHIQPSGRFVVGGPQGDAGLTGRKIIVDTY 258          
The following BLAST results are available for this feature:
BLAST of FC931644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_DICDI2.159e-8067.43S-adenosylmethionine synthetase OS=Dictyostelium d... [more]
METK_ACACA1.185e-7864.06S-adenosylmethionine synthetase OS=Acanthamoeba ca... [more]
METK2_PONAB7.187e-7663.59S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MACFA7.187e-7663.59S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_HUMAN7.187e-7663.59S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MOUSE9.386e-7663.13S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_RAT1.226e-7562.67S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK_ASCIM5.694e-7359.45S-adenosylmethionine synthetase OS=Ascobolus immer... [more]
METK1_HUMAN2.164e-7258.99S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_SCHPO3.691e-7256.68S-adenosylmethionine synthetase OS=Schizosaccharom... [more]

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Properties
Property NameValue
Genbank descriptionC34107D11EF PostHarvP1 Citrus clementina cDNA clone C34107D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931644 ID=FC931644; Name=FC931644; organism=Citrus clementina; type=EST; length=688bp
GTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCACA
ACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCAA
CATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAGG
TTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCAT
GGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGCA
TATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGTC
ATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAAT
GGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTGA
GTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTTT
TGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGCT
GATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTGA
TGAGAAGACTATCTTCCATCTTAACCCATCCGGTCGTTTTGTGATTGGTG
GGCCTCATGGTGACGCTGGTTTGACCGGCCGCAAGATCATTATCGATACT
TATGGTGGTTGGGGAGCTCACGGTGGTGGTGCATTCTC
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