FC931644

Overview
NameFC931644
Unique NameFC931644
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15105 contig Ccv1_Contig15105:214..901. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_NEUCR (S-adenosylmethionine synthetase OS=Neurospora crassa GN=eth-1 PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 6.296e-72
Identity = 127/217 (58.53%), Postives = 166/217 (76.50%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET TKT ++MVFGEITTKA ++Y+K+VR+  ++IG+     G D   C +LV IE+QSPDIAQG+H  L  R E +GAGDQG MFGYATDETPE  PL+ + A +L A ++  R++G+ PWLRPD KTQVT+EY ++NGA+VP+RV TV++S QH   +T +E+  ++ E +IK  IP KYLDEKT++H+ PSG FVIGGP GDAGLTGRKII+DTY
Sbjct:   56 ETATKTGMIMVFGEITTKAKLDYQKVVRNAIKDIGYDDSSKGFDYKTCNLLVAIEEQSPDIAQGLH--LDDRLENLGAGDQGIMFGYATDETPELFPLTLLFAHKLNAAMSAARRDGSLPWLRPDTKTQVTIEYKHDNGAVVPLRVDTVVVSAQHAPEITTEELRKEILEKIIKTTIPAKYLDEKTVYHIQPSGLFVIGGPQGDAGLTGRKIIVDTY 270          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK1_RAT (S-adenosylmethionine synthetase isoform type-1 OS=Rattus norvegicus GN=Mat1a PE=1 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 6.296e-72
Identity = 129/217 (59.45%), Postives = 167/217 (76.96%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET  KT +V++ GEIT+ A ++Y+++VRDT ++IG+     G D   C VLV +EQQSPDIAQ VH  L +  E++GAGDQG MFGYATDET E MPL+ VLA +L  ++ ++R++G  PWLRPD KTQVTV+Y  +NGA++PVRVHT++IS QH+E +T + +   LKE VIK V+P KYLDE TI+HL PSGRFVIGGP GDAG+TGRKII+DTY
Sbjct:   58 ETVCKTGMVLLCGEITSMAMIDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVH--LDRNEEDVGAGDQGLMFGYATDETEECMPLTIVLAHKLNTRMADLRRSGVLPWLRPDSKTQVTVQYVQDNGAVIPVRVHTIVISVQHNEDITLEAMREALKEQVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGVTGRKIIVDTY 272          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK1_MOUSE (S-adenosylmethionine synthetase isoform type-1 OS=Mus musculus GN=Mat1a PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.074e-71
Identity = 128/217 (58.99%), Postives = 167/217 (76.96%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET  KT +V++ GEIT+ A V+Y+++VRDT ++IG+     G D   C VLV +EQQSPDIAQ VH  L +  E++GAGDQG MFGYATDET E MPL+ VLA +L  ++ ++R++G  PWLRPD KTQVTV+Y  +NGA++PVR+HT++IS QH+E +T + +   LKE VIK V+P KYLDE T++HL PSGRFVIGGP GDAG+TGRKII+DTY
Sbjct:   58 ETVCKTGMVLLCGEITSVAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVH--LDRNEEDVGAGDQGLMFGYATDETEECMPLTIVLAHKLNTRIADLRRSGVLPWLRPDSKTQVTVQYMQDNGAVIPVRIHTIVISVQHNEDITLEAMQEALKEQVIKAVVPAKYLDEDTVYHLQPSGRFVIGGPQGDAGVTGRKIIVDTY 272          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK1_BOVIN (S-adenosylmethionine synthetase isoform type-1 OS=Bos taurus GN=MAT1A PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.187e-70
Identity = 127/217 (58.53%), Postives = 169/217 (77.88%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET  KT +V++ GEIT+ A V+Y+++VR+T ++IG+     G D   C VLV +EQQSPDIAQ VH  L +  E++GAGDQG MFGYATDET E MPL+ +LA +L A++ E+R++G  PWL+PD KTQVTV+Y  +NGA++P+RVHTV+IS QH+E +T +++   LKE VI+ V+P +YLDE TI+HL PSGRFVIGGP GDAG+TGRKII+DTY
Sbjct:   58 ETVCKTGMVLLCGEITSMAMVDYQRVVRETIQHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVH--LDRNEEDVGAGDQGLMFGYATDETEECMPLTIMLAHRLNARMAELRRSGQLPWLQPDSKTQVTVQYTQDNGAVIPMRVHTVVISVQHNEDITLEDMRRALKEQVIRAVVPARYLDEDTIYHLQPSGRFVIGGPQGDAGVTGRKIIVDTY 272          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_LEIIN (S-adenosylmethionine synthetase OS=Leishmania infantum GN=METK PE=2 SV=2)

HSP 1 Score: 258.84 bits (660), Expect = 1.896e-68
Identity = 136/221 (61.54%), Postives = 163/221 (73.76%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENG----AMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            E+C KT +VMVFGEITTKA ++Y+KIVR+T ++IGF S D GLD ++C VLV IEQQSPDI QG+    S   E++GAGDQG MFGYATDET   MPL++ LA  L  K +E+R++G+  W RPD KTQVTVEY  +       + P RV  VLIS QHDE VTND+I+ DL E VIK VIP   LD +T + LNPSGRFV GGPHGDAGLTGRKII+DTY
Sbjct:   45 ESCAKTGMVMVFGEITTKAVLDYQKIVRNTIKDIGFDSADKGLDYESCNVLVAIEQQSPDICQGLGNFDS---EDLGAGDQGMMFGYATDETETLMPLTYELARGLAKKYSELRRSGSLEWARPDAKTQVTVEYDYDTREGKQVLTPKRVAVVLISAQHDEHVTNDKISVDLMEKVIKAVIPANMLDAETKYWLNPSGRFVRGGPHGDAGLTGRKIIVDTY 262          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK1_YEAST (S-adenosylmethionine synthetase 1 OS=Saccharomyces cerevisiae GN=SAM1 PE=1 SV=2)

HSP 1 Score: 256.144 bits (653), Expect = 1.229e-67
Identity = 126/217 (58.06%), Postives = 159/217 (73.27%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET  KT ++MVFGEITTKA ++Y+KIVRDT + IG+     G D   C VLV IEQQSPDIAQGVH    K  E+IGAGDQG MFGYATDETPE +PL+ +LA +L   + + R++G+  WLRPD KTQVTVEY +++G  VP R+ TV++S QH + +T +++ A LK  +I+ VIP   LDE T + + PSGRFVIGGP GDAGLTGRKII+D Y
Sbjct:   44 ETAAKTGMIMVFGEITTKAQLDYQKIVRDTIKKIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGVHEE--KDLEDIGAGDQGIMFGYATDETPEGLPLTILLAHKLNMAMADARRDGSLAWLRPDTKTQVTVEYKDDHGRWVPQRIDTVVVSAQHADEITTEDLRAQLKSEIIEKVIPRDMLDENTKYFIQPSGRFVIGGPQGDAGLTGRKIIVDAY 258          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK1_CAEEL (Probable S-adenosylmethionine synthetase 1 OS=Caenorhabditis elegans GN=sams-1 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 2.737e-67
Identity = 121/217 (55.76%), Postives = 162/217 (74.65%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET TKT +VM+ GEIT+KA V+Y+ +VR     IGF    +G D   C VLV +EQQSP+IA GVH  ++K  E++GAGDQG MFGYATDET E MPL+ +L+ ++ A+L ++R+NGT PW+RPD K+QVT+EY + +GA +P+RVHTV++STQH   VT +++   +   VIK VIP   LDE T+FH+NP G F++GGP GDAG+TGRKII+DTY
Sbjct:   44 ETVTKTGMVMLCGEITSKAVVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVH--VNKDGEDVGAGDQGIMFGYATDETEETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQVTIEYESRHGATIPLRVHTVVVSTQHSPDVTLEKLRETILADVIKKVIPASLLDESTVFHINPCGTFIVGGPMGDAGVTGRKIIVDTY 258          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK4_CAEEL (Probable S-adenosylmethionine synthetase 4 OS=Caenorhabditis elegans GN=sams-4 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 4.669e-67
Identity = 124/217 (57.14%), Postives = 162/217 (74.65%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET TKT ++M+ GEIT+KA V+Y+ +VR+  + IG+     G D   C VLV +EQQSP+IA GVH  + K  +++GAGDQG MFGYATDET E MPL+ +L+ +L  KL E+R++G   W+RPD KTQVT+EY +E GA VP+RVHTV+ISTQH   ++ D++  +L E VIK VIP   +D+KTI+HLNP G F+IGGP GDAGLTGRKII+DTY
Sbjct:   45 ETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVH--VDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIPANLIDDKTIYHLNPCGSFIIGGPMGDAGLTGRKIIVDTY 259          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK3_CAEEL (Probable S-adenosylmethionine synthetase 3 OS=Caenorhabditis elegans GN=sams-3 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 4.669e-67
Identity = 124/217 (57.14%), Postives = 162/217 (74.65%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET TKT ++M+ GEIT+KA V+Y+ +VR+  + IG+     G D   C VLV +EQQSP+IA GVH  + K  +++GAGDQG MFGYATDET E MPL+ +L+ +L  KL E+R++G   W+RPD KTQVT+EY +E GA VP+RVHTV+ISTQH   ++ D++  +L E VIK VIP   +D+KTI+HLNP G F+IGGP GDAGLTGRKII+DTY
Sbjct:   45 ETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVH--VDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIPANLIDDKTIYHLNPCGSFIIGGPMGDAGLTGRKIIVDTY 259          
BLAST of FC931644 vs. ExPASy Swiss-Prot
Match: METK_LACRJ (S-adenosylmethionine synthetase OS=Lactobacillus reuteri (strain JCM 1112) GN=metK PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 7.964e-67
Identity = 131/223 (58.74%), Postives = 165/223 (73.99%), Query Frame = 3
Query:    3 ETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY 653
            ET   T LV+VFGE++TKA VN ++IVRDT R IG+     G DADNC V+  I++QSPDIAQGV   L  R  E      IGAGDQG MFGYATDETPE+MPL+ VL+ +L  K+ ++RK+G   +LRPD K +VTVEY +EN    P+RV TV++STQHD  V+ D+I  D+KE VI+ VIP +YLD++T + +NP+GRFVIGGP GDAGLTGRKII+DTY
Sbjct:   44 ETSVTTGLVLVFGEVSTKAYVNIQQIVRDTIRKIGYTDGKYGFDADNCAVITAIDEQSPDIAQGVDDSLETREGEADPLDKIGAGDQGLMFGYATDETPEYMPLTLVLSHKLMRKIAQLRKDGVISYLRPDAKAEVTVEY-DENDK--PLRVDTVVLSTQHDPEVSLDQIKKDIKEQVIEAVIPAEYLDDQTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTY 263          
The following BLAST results are available for this feature:
BLAST of FC931644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_NEUCR6.296e-7258.53S-adenosylmethionine synthetase OS=Neurospora cras... [more]
METK1_RAT6.296e-7259.45S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_MOUSE1.074e-7158.99S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_BOVIN1.187e-7058.53S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_LEIIN1.896e-6861.54S-adenosylmethionine synthetase OS=Leishmania infa... [more]
METK1_YEAST1.229e-6758.06S-adenosylmethionine synthetase 1 OS=Saccharomyces... [more]
METK1_CAEEL2.737e-6755.76Probable S-adenosylmethionine synthetase 1 OS=Caen... [more]
METK4_CAEEL4.669e-6757.14Probable S-adenosylmethionine synthetase 4 OS=Caen... [more]
METK3_CAEEL4.669e-6757.14Probable S-adenosylmethionine synthetase 3 OS=Caen... [more]
METK_LACRJ7.964e-6758.74S-adenosylmethionine synthetase OS=Lactobacillus r... [more]

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Properties
Property NameValue
Genbank descriptionC34107D11EF PostHarvP1 Citrus clementina cDNA clone C34107D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931644 ID=FC931644; Name=FC931644; organism=Citrus clementina; type=EST; length=688bp
GTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCACA
ACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCAA
CATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAGG
TTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCAT
GGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGCA
TATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGTC
ATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAAT
GGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTGA
GTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTTT
TGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGCT
GATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCTGAGAAGTACCTTGA
TGAGAAGACTATCTTCCATCTTAACCCATCCGGTCGTTTTGTGATTGGTG
GGCCTCATGGTGACGCTGGTTTGACCGGCCGCAAGATCATTATCGATACT
TATGGTGGTTGGGGAGCTCACGGTGGTGGTGCATTCTC
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