FC931650

Overview
NameFC931650
Unique NameFC931650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.151e-18
Identity = 52/106 (49.06%), Postives = 69/106 (65.09%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE+ +N SLHD L  RK V   QP   L+W +R KI +G A+G+ YLHE+++  IIHRDIK SN+L+ DD   +IADF L+   P+    + ST + GT GY APE
Sbjct:  396 YEYIANQSLHDYLFVRKDV---QP---LNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHI-STAIAGTLGYMAPE 494          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.503e-18
Identity = 51/106 (48.11%), Postives = 68/106 (64.15%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE+ S GSL D L+G +  + +     L+W  R+K+AV AAKGL+YLH  ++P IIHRD+KSSN+L+  D  AK++DF LS Q     A   +T V GT GY  PE
Sbjct:  679 YEYLSGGSLADHLYGPRSKRHS-----LNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPE 779          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.503e-18
Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE*AI 330
            YE+   GSL D LH      G +P   L W  R+KIA GAA+GLEYLH++  P +I+RD+K SN+L+ +D   K++DF L+   P       STRV+GT+GY AP+ A+
Sbjct:  177 YEYMPQGSLEDHLHVLPS--GKKP---LDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAM 280          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.503e-18
Identity = 53/107 (49.53%), Postives = 67/107 (62.62%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGR-KGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            Y++  NGSL D+LHG  K VK       L W+ R+KIAVGAA+GL YLH    P IIHRDIKSSN+L+  +  A+++DF ++   P       ST VLGT GY  PE
Sbjct:  724 YDYMENGSLWDLLHGPGKKVK-------LDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDGNFEARLSDFGIAKSIP-ATKTYASTYVLGTIGYIDPE 822          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18
Identity = 53/109 (48.62%), Postives = 68/109 (62.39%), Query Frame = 1
Query:    7 EFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE*AIY 333
            +  SNGSLHD L G    +       L+W  R +IA+G A+GL YLH  A P IIHRDIK+SN+L+ +   AK+ADF L+   P+    + STRV GT GY APE A+Y
Sbjct:  362 DLVSNGSLHDHLFGDLEAQ-------LAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHM-STRVAGTMGYVAPEYALY 462          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.348e-18
Identity = 50/107 (46.73%), Postives = 70/107 (65.42%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH-STRVLGTFGYHAPE 321
            YE+  +G+L D L  R         P LSW++R++I +GAA+GL+YLH  A   IIHRDIK++N+L+ ++ V K++DF LS   P  A++ H ST V GTFGY  PE
Sbjct:  592 YEYMPHGTLKDHLFRRDKTSD----PPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPE 694          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.348e-18
Identity = 48/106 (45.28%), Postives = 66/106 (62.26%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE+   GSL D+LH RK +     G  L+W  R KIA+GAA+GL +LH    PHIIHRD+KSSNVL+ ++  A+++DF ++     M   L  + + GT GY  PE
Sbjct:  961 YEYMKYGSLEDVLHDRKKI-----GIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPE 1061          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 48/106 (45.28%), Postives = 66/106 (62.26%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE+   GSL D+LH RK     + G  L+W  R KIA+GAA+GL +LH    PHIIHRD+KSSNVL+ ++  A+++DF ++     M   L  + + GT GY  PE
Sbjct:  961 YEYMKYGSLEDVLHDRK-----KTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPE 1061          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.711e-18
Identity = 47/106 (44.34%), Postives = 68/106 (64.15%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE+ ++G+L   LHG     G      L+W+ R+KI  G A+ L YLHE  +P ++HRDIK+SN+LI D+  AK++DF L+       + + +TRV+GTFGY APE
Sbjct:  256 YEYVNSGNLEQWLHGAMRQHGN-----LTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHI-TTRVMGTFGYVAPE 355          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.711e-18
Identity = 50/107 (46.73%), Postives = 66/107 (61.68%), Query Frame = 1
Query:    4 YEFASNGSLHDILHG-RKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YEF   GSL ++LHG R G K      +L W++R KIA GAAKGL +LH    PHIIHRD+KSSNVL+  D  A+++DF ++     +   L  + + GT GY  PE
Sbjct:  911 YEFMQYGSLEEVLHGPRTGEKRR----ILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPE 1013          
The following BLAST results are available for this feature:
BLAST of FC931650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
CRK3_ARATH1.151e-1849.06Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
Y5487_ARATH1.503e-1848.11Probable LRR receptor-like serine/threonine-protei... [more]
RLCK7_ARATH1.503e-1845.87Probable serine/threonine-protein kinase RLCKVII O... [more]
ERL2_ARATH1.503e-1849.53LRR receptor-like serine/threonine-protein kinase ... [more]
RKF3_ARATH2.564e-1848.62Probable LRR receptor-like serine/threonine-protei... [more]
Y5900_ARATH3.348e-1846.73Putative receptor-like protein kinase At5g39000 OS... [more]
BRI1_SOLLC3.348e-1845.28Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
BRI1_SOLPE4.373e-1845.28Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
Y2296_ARATH5.711e-1844.34Probable receptor-like protein kinase At2g42960 OS... [more]
BRL2_ARATH5.711e-1846.73Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC34107E05EF PostHarvP1 Citrus clementina cDNA clone C34107E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931650 ID=FC931650; Name=FC931650; organism=Citrus clementina; type=EST; length=721bp
GCCTACGAGTTTGCATCTAATGGATCTCTTCATGATATTCTTCATGGGAG
GAAAGGTGTAAAAGGAGCTCAGCCTGGTCCTGTTTTGTCATGGCAACAGC
GAGTGAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGAATACTTGCATGAG
AAGGCAGATCCTCATATTATCCATCGCGATATTAAGTCCAGCAATGTACT
AATTTTTGATGATGATGTAGCAAAGATTGCCGACTTTGATTTATCTAATC
AAGCTCCTGATATGGCAGCTCGCCTTCATTCTACTCGTGTTCTTGGAACT
TTTGGTTATCATGCTCCTGAGTAAGCTATATATAACTGTTGTATGGCTTT
CATATTATGTTTGTGCTATATCACAGATCCGTTTGTTTACACTAAAAATT
ATGGCAACTAGAGAATATCATGGGATTGGCTCTCTGAGTTTTCATTCAAT
AACTATATTCTATGAATGAACCTAATATATACTAATGCTCCATTTAATTG
TCAGGATATTTCAGTGAAGAAATACAGAACTTGAATTTACCTTTGTGCAC
CCAGATTAAATGTTATTTTTCAGTGTATCGTTCCCTGTACCCTCCAATCT
GAGCCGCCGTAATATTCTAAAGGATTCTTAATTTAATAGCATCTATGTGA
GCATGTGTACCTTGATACTTGATCTCAATAATATAACATCTGGTTCTTGT
GGTTTGCAGGTATGCATGACT
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