FC931650

Overview
NameFC931650
Unique NameFC931650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.314e-17
Identity = 48/106 (45.28%), Postives = 56/106 (52.83%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            Y +  NGSLHDILH         P   L W  R  IAVG A GL YLH   DP I+HRDIK  N+L+  D    I+DF ++      A  + S  V GT GY APE
Sbjct:  890 YTYMENGSLHDILHE------TNPPKPLDWSTRHNIAVGTAHGLAYLHFDCDPAIVHRDIKPMNILLDSDLEPHISDFGIAKLLDQSATSIPSNTVQGTIGYMAPE 989          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.314e-17
Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN--QAPDMAARLHSTRVLGTFGYHAPE 321
            YE+ SNG LH  L G+ G      G VL+W  R++IA+ AA GLEYLH    P ++HRD+KS+N+L+ ++  AKIADF LS   Q     +++ ST V GT GY  PE
Sbjct:  639 YEYMSNGDLHQHLSGKHG------GSVLNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQV-STVVAGTLGYLDPE 739          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.247e-17
Identity = 47/106 (44.34%), Postives = 67/106 (63.21%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE+ +NG L + + G++G      G VL+W+ R++IAV AA+GLEYLH    P ++HRD+K++N+L+ +   AK+ADF LS   P       ST V GT GY  PE
Sbjct:  656 YEYMANGDLRENMSGKRG------GNVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPE 755          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.247e-17
Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE+ +NG L + + G++G      G +L+W+ R+KI V +A+GLEYLH    P ++HRD+K++N+L+ +   AK+ADF LS   P       ST V GT GY  PE
Sbjct:  665 YEYMANGDLREHMSGKRG------GSILNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGTPGYLDPE 764          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 87.4261 bits (215), Expect = 8.247e-17
Identity = 50/107 (46.73%), Postives = 66/107 (61.68%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGP-VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            Y +  NGSL   LH R        GP +L W+ R++IA GAAKGL YLHE  DPHI+HRDIKSSN+L+ ++  + +ADF L+         + ST ++GT GY  PE
Sbjct:  807 YSYMENGSLDYWLHERND------GPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHV-STDLVGTLGYIPPE 906          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.247e-17
Identity = 45/106 (42.45%), Postives = 70/106 (66.04%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            Y++ + G+L + L+  K        P L+W++R++IA+GAA+GL YLH  A   IIHRD+K++N+L+ ++ VAK++DF LS   P+M     +T V G+FGY  PE
Sbjct:  590 YDYMAFGTLREHLYNTKK-------PQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILVDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPE 688          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.077e-16
Identity = 45/106 (42.45%), Postives = 67/106 (63.21%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE+  NG+L   L+G   +        LSW+QR++I +G+A+GL YLH      +IHRD+KS+N+L+ ++ +AK+ADF LS   P++     ST V G+FGY  PE
Sbjct:  555 YEYMENGTLKSHLYGSGLLS-------LSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPE 653          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.077e-16
Identity = 45/106 (42.45%), Postives = 65/106 (61.32%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE+ +NG L + + G++G      G +L+W  R+KIA+ AA+GLEYLH    P ++HRD+K++N+L+ +    K+ADF LS   P       ST V GT GY  PE
Sbjct:  650 YEYMANGDLDEHMSGKRG------GSILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPE 749          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.077e-16
Identity = 50/106 (47.17%), Postives = 63/106 (59.43%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            Y +  NGSL D L    G       P LSW  R KIA GAA GL YLHE    H IHRDIKS+N+L+ +D  AKI+DF L+  +   A  + ++R++GT  Y APE
Sbjct:  263 YVYMPNGSLLDRLSCLDGT------PPLSWNMRCKIAQGAANGLSYLHEN---HHIHRDIKSANILLDEDFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPE 359          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.407e-16
Identity = 47/106 (44.34%), Postives = 61/106 (57.55%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            Y++ SNGSL  +LH R GV        L W+ R KI +GAA+GL YLH    P I+HRDIK++N+LI  D    I DF L+    D      S  + G++GY APE
Sbjct:  868 YDYMSNGSLGSLLHERSGVCS------LGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGSYGYIAPE 967          
The following BLAST results are available for this feature:
BLAST of FC931650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
RPK1_IPONI6.314e-1745.28Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
MEE39_ARATH6.314e-1747.22Probable LRR receptor-like serine/threonine-protei... [more]
Y1518_ARATH8.247e-1744.34Probable LRR receptor-like serine/threonine-protei... [more]
RLK6_ARATH8.247e-1742.45Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
PSKR1_ARATH8.247e-1746.73Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
ANX1_ARATH8.247e-1742.45Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
Y5597_ARATH1.077e-1642.45Probable receptor-like protein kinase At5g59700 OS... [more]
Y5181_ARATH1.077e-1642.45Probable LRR receptor-like serine/threonine-protei... [more]
IRAK4_BOVIN1.077e-1647.17Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]
RCH1_ARATH1.407e-1644.34LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionC34107E05EF PostHarvP1 Citrus clementina cDNA clone C34107E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931650 ID=FC931650; Name=FC931650; organism=Citrus clementina; type=EST; length=721bp
GCCTACGAGTTTGCATCTAATGGATCTCTTCATGATATTCTTCATGGGAG
GAAAGGTGTAAAAGGAGCTCAGCCTGGTCCTGTTTTGTCATGGCAACAGC
GAGTGAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGAATACTTGCATGAG
AAGGCAGATCCTCATATTATCCATCGCGATATTAAGTCCAGCAATGTACT
AATTTTTGATGATGATGTAGCAAAGATTGCCGACTTTGATTTATCTAATC
AAGCTCCTGATATGGCAGCTCGCCTTCATTCTACTCGTGTTCTTGGAACT
TTTGGTTATCATGCTCCTGAGTAAGCTATATATAACTGTTGTATGGCTTT
CATATTATGTTTGTGCTATATCACAGATCCGTTTGTTTACACTAAAAATT
ATGGCAACTAGAGAATATCATGGGATTGGCTCTCTGAGTTTTCATTCAAT
AACTATATTCTATGAATGAACCTAATATATACTAATGCTCCATTTAATTG
TCAGGATATTTCAGTGAAGAAATACAGAACTTGAATTTACCTTTGTGCAC
CCAGATTAAATGTTATTTTTCAGTGTATCGTTCCCTGTACCCTCCAATCT
GAGCCGCCGTAATATTCTAAAGGATTCTTAATTTAATAGCATCTATGTGA
GCATGTGTACCTTGATACTTGATCTCAATAATATAACATCTGGTTCTTGT
GGTTTGCAGGTATGCATGACT
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