FC931650

Overview
NameFC931650
Unique NameFC931650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.093e-16
Identity = 47/106 (44.34%), Postives = 60/106 (56.60%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE+A NG L   L G +G      G  L W  R+KI V  A+GLEYLH    P ++HRD+K++N+L+ +   AK+ADF LS   P       ST V GT GY  PE
Sbjct:  646 YEYAPNGDLKQHLSGERG------GSPLKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPE 745          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.093e-16
Identity = 49/106 (46.23%), Postives = 64/106 (60.38%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE+ SNG   D L+G    K   P   L+W+QR++I +GAA+GL YLH      IIHRD+KS+N+L+ +  VAK+ADF LS           ST V G+FGY  PE
Sbjct:  598 YEYMSNGPFRDHLYG----KNLSP---LTWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVA-FGQNHVSTAVKGSFGYLDPE 695          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.093e-16
Identity = 51/106 (48.11%), Postives = 67/106 (63.21%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YEF   GSL + L  R    GAQP   L+W  R+K+AVGAAKGL +LHE A   +I+RD K++N+L+  D  AK++DF L+   P       ST+V+GT GY APE
Sbjct:  169 YEFMPKGSLENHLFRR----GAQP---LTWAIRMKVAVGAAKGLTFLHE-AKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPE 266          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.346e-16
Identity = 49/106 (46.23%), Postives = 64/106 (60.38%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YEF SNG   D L+G    K   P   L+W+QR++I +G+A+GL YLH      IIHRD+KS+N+L+ +  VAK+ADF LS           ST V G+FGY  PE
Sbjct:  599 YEFMSNGPFRDHLYG----KNLAP---LTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVA-FGQNHVSTAVKGSFGYLDPE 696          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.346e-16
Identity = 47/106 (44.34%), Postives = 63/106 (59.43%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE+ S GSL ++LHG K          + W  R  IA+GAA+GL YLH    P IIHRDIKS+N+LI ++  A + DF L+ +  DM      + V G++GY APE
Sbjct:  901 YEYMSRGSLGELLHGGKSHS-------MDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLA-KVIDMPLSKSVSAVAGSYGYIAPE 998          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.346e-16
Identity = 48/109 (44.04%), Postives = 64/109 (58.72%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE*AI 330
            YE+  NGSL   L G K +        L W  R +I +G A+GL YLHE+A   I+HRD+K+SN+L+    V +I+DF L+    D    + STRV GT GY APE A+
Sbjct:  767 YEYLPNGSLDQALFGDKTLH-------LDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHI-STRVAGTIGYLAPEYAM 867          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.981e-16
Identity = 47/106 (44.34%), Postives = 59/106 (55.66%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            Y++  NGSLHD+LH     +G Q   VL W  R  IA+G + GL YLH    P IIHRDIK  N+L+  D    I DF L+    D  + + +  V GT GY APE
Sbjct:  868 YQYMPNGSLHDVLH-----RGNQGEAVLDWSARFNIALGISHGLAYLHHDCHPPIIHRDIKPENILMDSDMEPHIGDFGLARILDD--STVSTATVTGTTGYIAPE 966          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.118e-16
Identity = 49/106 (46.23%), Postives = 62/106 (58.49%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE+  NG L   L G+ G      G VLSW+ R+KI + AA GLEYLH    P ++HRDIK++N+L+     AK+ADF LS   P    +  ST V GT GY  PE
Sbjct:  650 YEYMPNGDLKQHLSGKHG------GFVLSWESRLKIVLDAALGLEYLHTGCVPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNEKNVSTVVAGTPGYLDPE 749          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.118e-16
Identity = 43/106 (40.57%), Postives = 67/106 (63.21%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            Y++ ++G++ + L+  +        P L W+QR++I +GAA+GL YLH  A   IIHRD+K++N+L+ +  VAK++DF LS   P +     ST V G+FGY  PE
Sbjct:  610 YDYMAHGTMREHLYKTQN-------PSLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPE 708          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.191e-15
Identity = 46/109 (42.20%), Postives = 66/109 (60.55%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE*AI 330
            YE+  NG+L D LH             L+W  RVK+A+G AK LEYLHE   P I+HR+ KS+N+L+ ++    ++D  L+   P+   R  ST+V+G+FGY APE A+
Sbjct:  470 YEYVGNGNLDDTLHTND-----DRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPN-TERQVSTQVVGSFGYSAPEFAL 572          
The following BLAST results are available for this feature:
BLAST of FC931650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
Y2289_ARATH4.093e-1644.34Probable LRR receptor-like serine/threonine-protei... [more]
Y2214_ARATH4.093e-1646.23Probable receptor-like protein kinase At2g21480 OS... [more]
APK2A_ARATH4.093e-1648.11Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
Y4391_ARATH5.346e-1646.23Probable receptor-like protein kinase At4g39110 OS... [more]
Y2317_ARATH5.346e-1644.34Probable leucine-rich repeat receptor-like protein... [more]
Y1561_ARATH5.346e-1644.04Probable LRR receptor-like serine/threonine-protei... [more]
PEPR2_ARATH6.981e-1644.34Leucine-rich repeat receptor-like protein kinase P... [more]
Y2899_ARATH9.118e-1646.23Probable leucine-rich repeat receptor-like protein... [more]
FERON_ARATH9.118e-1640.57Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
SRF8_ARATH1.191e-1542.20Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionC34107E05EF PostHarvP1 Citrus clementina cDNA clone C34107E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931650 ID=FC931650; Name=FC931650; organism=Citrus clementina; type=EST; length=721bp
GCCTACGAGTTTGCATCTAATGGATCTCTTCATGATATTCTTCATGGGAG
GAAAGGTGTAAAAGGAGCTCAGCCTGGTCCTGTTTTGTCATGGCAACAGC
GAGTGAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGAATACTTGCATGAG
AAGGCAGATCCTCATATTATCCATCGCGATATTAAGTCCAGCAATGTACT
AATTTTTGATGATGATGTAGCAAAGATTGCCGACTTTGATTTATCTAATC
AAGCTCCTGATATGGCAGCTCGCCTTCATTCTACTCGTGTTCTTGGAACT
TTTGGTTATCATGCTCCTGAGTAAGCTATATATAACTGTTGTATGGCTTT
CATATTATGTTTGTGCTATATCACAGATCCGTTTGTTTACACTAAAAATT
ATGGCAACTAGAGAATATCATGGGATTGGCTCTCTGAGTTTTCATTCAAT
AACTATATTCTATGAATGAACCTAATATATACTAATGCTCCATTTAATTG
TCAGGATATTTCAGTGAAGAAATACAGAACTTGAATTTACCTTTGTGCAC
CCAGATTAAATGTTATTTTTCAGTGTATCGTTCCCTGTACCCTCCAATCT
GAGCCGCCGTAATATTCTAAAGGATTCTTAATTTAATAGCATCTATGTGA
GCATGTGTACCTTGATACTTGATCTCAATAATATAACATCTGGTTCTTGT
GGTTTGCAGGTATGCATGACT
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