FC931650

Overview
NameFC931650
Unique NameFC931650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15
Identity = 44/106 (41.51%), Postives = 64/106 (60.38%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            Y +  NGS+ D L    G K     P L W +R+ IA+GAA+GL YLHE+ +P IIHRD+K++N+L+ +   A + DF L+       + + +T V GT G+ APE
Sbjct:  373 YPYMPNGSVADRLRDNYGEK-----PSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHV-TTAVRGTIGHIAPE 472          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15
Identity = 46/106 (43.40%), Postives = 63/106 (59.43%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            +E+  NG+LHD+LH    +K       LSW  RV+IA+ AAK LEYLHE  DP  IHR+ KS+N+L+ DD    ++D  L+      A    S ++L  +GY APE
Sbjct:  553 HEYCRNGTLHDLLHIDDRLKIE-----LSWNVRVRIALEAAKALEYLHEICDPPSIHRNFKSANILLDDDIRVHVSDCGLAPLISSGAVSQLSGQLLAAYGYGAPE 653          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15
Identity = 43/106 (40.57%), Postives = 61/106 (57.55%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YEF  NG L   L G+ G        +++W  R++IA+ AA GLEYLH    P ++HRD+K++N+L+ ++  AK+ADF LS           ST + GT GY  PE
Sbjct:  637 YEFLPNGDLKQHLSGKGG------NSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGYLDPE 736          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15
Identity = 52/107 (48.60%), Postives = 70/107 (65.42%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH-STRVLGTFGYHAPE 321
            YEF + GSL + L  R+G    QP   LSW  RV++A+GAA+GL +LH  A P +I+RD K+SN+L+  +  AK++DF L+   P M    H STRV+GT GY APE
Sbjct:  151 YEFMTRGSLENHLF-RRGTF-YQP---LSWNTRVRMALGAARGLAFLHN-AQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGP-MGDNSHVSTRVMGTQGYAAPE 250          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: IRAK4_MOUSE (Interleukin-1 receptor-associated kinase 4 OS=Mus musculus GN=Irak4 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15
Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            Y +  NGSL D L    G       P LSW  R K+A G A G+ +LHE    H IHRDIKS+N+L+  D  AKI+DF L+  +  +A  + ++R++GT  Y APE
Sbjct:  262 YAYMPNGSLLDRLSCLDGT------PPLSWHTRCKVAQGTANGIRFLHEN---HHIHRDIKSANILLDKDFTAKISDFGLARASARLAQTVMTSRIVGTTAYMAPE 358          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.525e-15
Identity = 45/106 (42.45%), Postives = 61/106 (57.55%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YEF  NG L   L G+ G       P+++W  R++IA  AA GLEYLH    P ++HRD+K++N+L+ +   AK+ADF LS   P       ST + GT GY  PE
Sbjct:  653 YEFVPNGDLRQHLSGKGGK------PIVNWGTRLRIAAEAALGLEYLHIGCTPPMVHRDVKTTNILLDEHYKAKLADFGLSRSFPVGGESHVSTVIAGTPGYLDPE 752          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.525e-15
Identity = 45/106 (42.45%), Postives = 61/106 (57.55%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE+   G L + + G+  V       VLSW+ R++IAV AA+GLEYLH    P ++HRD+K +N+L+ +   AK+ADF LS   P        T V GT GY  PE
Sbjct:  642 YEYMEKGDLRENMSGKHSVN------VLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPE 741          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.525e-15
Identity = 47/106 (44.34%), Postives = 62/106 (58.49%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE    G+L + L G+ G        VLSW  R+KIA+ +A G+EYLH    P I+HRD+KS+N+L+ ++  AKIADF LS     +      T V GTFGY  PE
Sbjct:  632 YELMGKGNLKEHLSGKPGCS------VLSWPIRLKIALESAIGIEYLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSRSFL-IGNEAQPTVVAGTFGYLDPE 730          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: IRAK4_HUMAN (Interleukin-1 receptor-associated kinase 4 OS=Homo sapiens GN=IRAK4 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.525e-15
Identity = 47/106 (44.34%), Postives = 62/106 (58.49%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            Y +  NGSL D L    G       P LSW  R KIA GAA G+ +LHE    H IHRDIKS+N+L+ +   AKI+DF L+  +   A  + ++R++GT  Y APE
Sbjct:  262 YVYMPNGSLLDRLSCLDGT------PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPE 358          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.525e-15
Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDM--AARLHSTRVLGTFGYHAPE 321
            YE+ +NGS+ D LH  +  K  +   VL W+ R+KIA+G A+G+EYLH    P I+HRDIKSSNVL+  +  A + DF L+             +T   G++GY APE
Sbjct: 1024 YEYMANGSVWDWLHANENTKKKE---VLGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPE 1128          
The following BLAST results are available for this feature:
BLAST of FC931650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
Y5457_ARATH3.465e-1541.51Probable LRR receptor-like serine/threonine-protei... [more]
SRF1_ARATH3.465e-1543.40Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
RLK7_ARATH3.465e-1540.57Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
NAK_ARATH3.465e-1548.60Probable serine/threonine-protein kinase NAK OS=Ar... [more]
IRAK4_MOUSE3.465e-1543.40Interleukin-1 receptor-associated kinase 4 OS=Mus ... [more]
Y5596_ARATH4.525e-1542.45Probable LRR receptor-like serine/threonine-protei... [more]
Y5189_ARATH4.525e-1542.45Probable LRR receptor-like protein kinase At1g5189... [more]
Y1755_ARATH4.525e-1544.34Probable LRR receptor-like serine/threonine-protei... [more]
IRAK4_HUMAN4.525e-1544.34Interleukin-1 receptor-associated kinase 4 OS=Homo... [more]
GSO2_ARATH4.525e-1542.59LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionC34107E05EF PostHarvP1 Citrus clementina cDNA clone C34107E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931650 ID=FC931650; Name=FC931650; organism=Citrus clementina; type=EST; length=721bp
GCCTACGAGTTTGCATCTAATGGATCTCTTCATGATATTCTTCATGGGAG
GAAAGGTGTAAAAGGAGCTCAGCCTGGTCCTGTTTTGTCATGGCAACAGC
GAGTGAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGAATACTTGCATGAG
AAGGCAGATCCTCATATTATCCATCGCGATATTAAGTCCAGCAATGTACT
AATTTTTGATGATGATGTAGCAAAGATTGCCGACTTTGATTTATCTAATC
AAGCTCCTGATATGGCAGCTCGCCTTCATTCTACTCGTGTTCTTGGAACT
TTTGGTTATCATGCTCCTGAGTAAGCTATATATAACTGTTGTATGGCTTT
CATATTATGTTTGTGCTATATCACAGATCCGTTTGTTTACACTAAAAATT
ATGGCAACTAGAGAATATCATGGGATTGGCTCTCTGAGTTTTCATTCAAT
AACTATATTCTATGAATGAACCTAATATATACTAATGCTCCATTTAATTG
TCAGGATATTTCAGTGAAGAAATACAGAACTTGAATTTACCTTTGTGCAC
CCAGATTAAATGTTATTTTTCAGTGTATCGTTCCCTGTACCCTCCAATCT
GAGCCGCCGTAATATTCTAAAGGATTCTTAATTTAATAGCATCTATGTGA
GCATGTGTACCTTGATACTTGATCTCAATAATATAACATCTGGTTCTTGT
GGTTTGCAGGTATGCATGACT
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