FC931650

Overview
NameFC931650
Unique NameFC931650
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.910e-15
Identity = 47/106 (44.34%), Postives = 60/106 (56.60%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE+  N SL   +           G  L WQ+R  I VG A+GL YLHE++   IIHRDIK+SN+L+     AKIADF L+    D  + + ST + GT GY APE
Sbjct:  398 YEYLQNKSLDRFIFD------VNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHI-STAIAGTLGYMAPE 496          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.910e-15
Identity = 49/106 (46.23%), Postives = 69/106 (65.09%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YEF   GSL + L  R+G+   QP   LSW+ R+K+A+GAAKGL +LH  ++  +I+RD K+SN+L+  +  AK++DF L+   P       STRV+GT GY APE
Sbjct:  151 YEFMPRGSLENHLF-RRGLY-FQP---LSWKLRLKVALGAAKGLAFLH-SSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPE 250          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.719e-15
Identity = 46/106 (43.40%), Postives = 65/106 (61.32%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            Y++  NGSL  +L+     K  + G VLSW  R +IA G A GL YLHE+ +  +IHRD+K SNVLI  D   ++ DF L+ +  +  ++  +T V+GT GY APE
Sbjct:  437 YDYIPNGSLDSLLYS----KPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLA-RLYERGSQSCTTVVVGTIGYMAPE 537          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.719e-15
Identity = 47/106 (44.34%), Postives = 67/106 (63.21%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YEF   GSL + L  R    GAQP   L+W  R+K+A+GAAKGL +LH+ A   +I+RD K++N+L+  +  +K++DF L+   P       ST+V+GT GY APE
Sbjct:  166 YEFMPKGSLENHLFRR----GAQP---LTWAIRMKVAIGAAKGLTFLHD-AKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPE 263          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.008e-14
Identity = 47/102 (46.08%), Postives = 59/102 (57.84%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGY 309
            Y++  NG L      +K   G+    ++SW  R+ IAV AA GLEYLH    P I+HRD+KSSN+L+ D   AK+ADF LS   P       ST V GTFGY
Sbjct:  643 YQYMVNGDL------KKHFSGSS---IISWVDRLNIAVDAASGLEYLHIGCKPLIVHRDVKSSNILLDDQLQAKLADFGLSRSFPIGDESHVSTLVAGTFGY 735          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.317e-14
Identity = 45/106 (42.45%), Postives = 60/106 (56.60%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            Y++  NGSL  +LH R+G         L W  R +I +GAA+GL YLH    P I+HRDIK++N+LI  D    IADF L+    +      S  V G++GY APE
Sbjct:  868 YDYMPNGSLGSLLHERRGSS-------LDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPE 966          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.246e-14
Identity = 45/106 (42.45%), Postives = 62/106 (58.49%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            YE+ SNG+L      ++ + G      LSW+ R++IA   A+GLEYLH    P +IHRDIKS N+L+ ++  AK+ DF LS   P  +    ST V G+ GY  PE
Sbjct:  664 YEYMSNGNL------KQHLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPE 763          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.246e-14
Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE*AI 330
            YE+  N  L   L G+      +    L W  R KI +G AKGL +LHE++   I+HRDIK+SNVL+  D  AKI+DF L+    D    + STR+ GT GY APE A+
Sbjct:  751 YEYLENNCLSRALFGKDESSRLK----LDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHI-STRIAGTIGYMAPEYAM 854          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.246e-14
Identity = 47/109 (43.12%), Postives = 64/109 (58.72%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE*AI 330
            YEF  N SL   L G +  +       L W  R KI +G A+GL YLHE++   I+HRDIK++NVL+      KI+DF L+    + +  + STR+ GTFGY APE A+
Sbjct:  697 YEFVENNSLARALFGPQETQLR-----LDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHI-STRIAGTFGYMAPEYAM 799          
BLAST of FC931650 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.246e-14
Identity = 45/106 (42.45%), Postives = 61/106 (57.55%), Query Frame = 1
Query:    4 YEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPE 321
            Y F  NGSL   LH R           L W  R+KIA GAA+GL YLH+  +P++IHRD+KSSN+L+ +   A +ADF L+         + +T ++GT GY  PE
Sbjct:  827 YSFMENGSLDYWLHER-----VDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHV-TTDLVGTLGYIPPE 926          
The following BLAST results are available for this feature:
BLAST of FC931650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
CRK2_ARATH5.910e-1544.34Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
APK1A_ARATH5.910e-1546.23Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
LRKA3_ARATH7.719e-1543.40Lectin-domain containing receptor kinase A4.3 OS=A... [more]
APK2B_ARATH7.719e-1544.34Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y1756_ARATH1.008e-1446.08Probable LRR receptor-like serine/threonine-protei... [more]
RCH2_ARATH1.317e-1442.45Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
Y4245_ARATH2.246e-1442.45Probable LRR receptor-like serine/threonine-protei... [more]
Y1765_ARATH2.246e-1444.04Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH2.246e-1443.12Probable LRR receptor-like serine/threonine-protei... [more]
PSKR2_ARATH2.246e-1442.45Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionC34107E05EF PostHarvP1 Citrus clementina cDNA clone C34107E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931650 ID=FC931650; Name=FC931650; organism=Citrus clementina; type=EST; length=721bp
GCCTACGAGTTTGCATCTAATGGATCTCTTCATGATATTCTTCATGGGAG
GAAAGGTGTAAAAGGAGCTCAGCCTGGTCCTGTTTTGTCATGGCAACAGC
GAGTGAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGAATACTTGCATGAG
AAGGCAGATCCTCATATTATCCATCGCGATATTAAGTCCAGCAATGTACT
AATTTTTGATGATGATGTAGCAAAGATTGCCGACTTTGATTTATCTAATC
AAGCTCCTGATATGGCAGCTCGCCTTCATTCTACTCGTGTTCTTGGAACT
TTTGGTTATCATGCTCCTGAGTAAGCTATATATAACTGTTGTATGGCTTT
CATATTATGTTTGTGCTATATCACAGATCCGTTTGTTTACACTAAAAATT
ATGGCAACTAGAGAATATCATGGGATTGGCTCTCTGAGTTTTCATTCAAT
AACTATATTCTATGAATGAACCTAATATATACTAATGCTCCATTTAATTG
TCAGGATATTTCAGTGAAGAAATACAGAACTTGAATTTACCTTTGTGCAC
CCAGATTAAATGTTATTTTTCAGTGTATCGTTCCCTGTACCCTCCAATCT
GAGCCGCCGTAATATTCTAAAGGATTCTTAATTTAATAGCATCTATGTGA
GCATGTGTACCTTGATACTTGATCTCAATAATATAACATCTGGTTCTTGT
GGTTTGCAGGTATGCATGACT
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