FC931653

Overview
NameFC931653
Unique NameFC931653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9408 contig Ccv1_Contig9408:5..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSY_VIGUN (Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 3.295e-78
Identity = 133/182 (73.08%), Postives = 152/182 (83.52%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MV++ EIR+AQRAEG ATILAI TATPPNCV Q+ YPDYYF ITNSEHMT            SMI+KR+M +TEEILK NP+MC +M  SLDARQDI +VEVP+LGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHVTEEILKENPSMCAYMAPSLDARQDIVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 41.9726 bits (97), Expect = 3.295e-78
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  182 KGARVLVVCSEITAVTFRGPSDTHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 4.298e-78
Identity = 130/182 (71.43%), Postives = 149/182 (81.87%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MVT+EE+RKAQRAEG AT++AI TA PPNCV QA YPDYYF ITNSEH              S I+KR+M L EE+LK NPNMC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVTVEEVRKAQRAEGPATVMAIGTAVPPNCVDQATYPDYYFRITNSEHKAELKEKFQRMCDKSQIKKRYMYLNEEVLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 40.817 bits (94), Expect = 4.298e-78
Identity = 18/26 (69.23%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGP+ TH+D
Sbjct:  182 KGARVLVVCSEITAVTFRGPTDTHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS5_SOYBN (Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 4.298e-78
Identity = 131/182 (71.98%), Postives = 153/182 (84.07%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MV++EEIR+AQRAEG AT++AI TATPPNCV Q+ YPDYYF ITNSEHMT            SMI+KR+M L EEILK NP++C +M  SLDARQD+ ++EVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVSVEEIRQAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVMEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 40.817 bits (94), Expect = 4.298e-78
Identity = 18/26 (69.23%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGP+ TH+D
Sbjct:  182 KGARVLVVCSEITAVTFRGPTDTHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS2_RUTGR (Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 5.605e-78
Identity = 134/181 (74.03%), Postives = 148/181 (81.77%), Query Frame = 2
Query:   77 VTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            VT+EEIRKAQRA+G A +LAI TATP N V QADYPDYYF IT SEHMT            SMIRKR+M LTE+ILK NPNMC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPG DYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENNR
Sbjct:    4 VTVEEIRKAQRADGPAAVLAIGTATPANYVTQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIRKRYMYLTEDILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGCDYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 184          

HSP 2 Score: 40.817 bits (94), Expect = 5.605e-78
Identity = 18/26 (69.23%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGP+ TH+D
Sbjct:  184 RGARVLVVCSEITAVTFRGPADTHLD 209          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS6_IPOBA (Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DII PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 5.605e-78
Identity = 132/188 (70.21%), Postives = 152/188 (80.85%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNRALVFLL 637
            MVT+EE+RKAQRAEG ATILAI TATP NCV Q+ YPDYYF ITNSEH T            SMI KR+M LTEEILK NP+ C +M  SLDARQDI++VEVPKLGKEAA  AIKEWGQPKS ITH++FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAENN+    L+
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLI 188          

HSP 2 Score: 43.5134 bits (101), Expect = 5.605e-78
Identity = 18/26 (69.23%), Postives = 23/26 (88.46%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVL+VCSE T+ TFRGPS TH+D
Sbjct:  182 KGARVLIVCSEITVVTFRGPSETHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS2_CITSI (Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 5.606e-78
Identity = 134/182 (73.63%), Postives = 150/182 (82.42%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            M T++EIR AQRA+G AT+LAI TATP + V QADYPDYYF IT SEHMT            SMI+KR+M LTEEILK NPNMC +M  SLDARQDI +VEVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+LIGL P VKR M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 40.817 bits (94), Expect = 5.606e-78
Identity = 18/26 (69.23%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGP+ TH+D
Sbjct:  182 KGARVLVVCSEITAVTFRGPADTHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSY_PHAVU (Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS17 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 5.606e-78
Identity = 134/182 (73.63%), Postives = 150/182 (82.42%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MV++ EIR+AQRAEG ATILAI TATP NCV Q+ YPDYYF ITNSEHMT            SMI+KR+M L EEILK NPNMC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHLNEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 41.9726 bits (97), Expect = 5.606e-78
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  182 KGARVLVVCSEITAVTFRGPSDTHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS2_SOLLC (Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS2 PE=2 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 7.311e-78
Identity = 130/182 (71.43%), Postives = 152/182 (83.52%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MVT+EE+R+AQRA+G ATI+AI TATP NCV Q+ YPDYYF ITNSEHMT            SMI KR+M LTEEILK NPN+C +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITH++FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T++RLAKDLAENN+
Sbjct:    1 MVTVEEVRRAQRAKGPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMINKRYMHLTEEILKENPNICEYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVIRLAKDLAENNK 182          

HSP 2 Score: 41.9726 bits (97), Expect = 7.311e-78
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  182 KGARVLVVCSEITAVTFRGPSDTHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS6_SOYBN (Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 9.536e-78
Identity = 131/181 (72.38%), Postives = 151/181 (83.43%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENN 616
            MV++EEIRKAQRAEG AT++AI TATPPNCV Q+ YPDYYF ITNS+HM             SMI+KR+M L EEILK NP++C +M  SLDARQD+ +VEVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSDHMNELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMEPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENN 181          

HSP 2 Score: 41.5874 bits (96), Expect = 9.536e-78
Identity = 19/25 (76.00%), Postives = 21/25 (84.00%), Query Frame = 1
Query:  619 GSRVLVVCSENTIPTFRGPSYTHID 693
            G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  183 GARVLVVCSEITAVTFRGPSDTHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSY_BETVE (Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 SV=2)

HSP 1 Score: 270.781 bits (691), Expect = 1.244e-77
Identity = 130/182 (71.43%), Postives = 149/182 (81.87%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            M ++EEIRKAQRA G AT+LAI TATP NC+ QADYPDYYF IT S+HMT            SMI+KR+M L EEIL  NPNMC +M  SLDARQ I +VEVPKLGKEAATKAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MASVEEIRKAQRAHGPATVLAIGTATPSNCITQADYPDYYFRITKSDHMTELKEKFKRMCDKSMIKKRYMYLNEEILNENPNMCAYMAPSLDARQTIVVVEVPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 40.817 bits (94), Expect = 1.244e-77
Identity = 18/26 (69.23%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGP+ TH+D
Sbjct:  182 KGARVLVVCSEITAVTFRGPTDTHLD 207          
The following BLAST results are available for this feature:
BLAST of FC931653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSY_VIGUN3.295e-7873.08Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2... [more]
CHSY_HYPAN4.298e-7871.43Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]
CHS5_SOYBN4.298e-7871.98Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV... [more]
CHS2_RUTGR5.605e-7874.03Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=... [more]
CHS6_IPOBA5.605e-7870.21Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DI... [more]
CHS2_CITSI5.606e-7873.63Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=... [more]
CHSY_PHAVU5.606e-7873.63Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS1... [more]
CHS2_SOLLC7.311e-7871.43Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS... [more]
CHS6_SOYBN9.536e-7872.38Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV... [more]
CHSY_BETVE1.244e-7771.43Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionC34107E08EF PostHarvP1 Citrus clementina cDNA clone C34107E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931653 ID=FC931653; Name=FC931653; organism=Citrus clementina; type=EST; length=695bp
ACAATCGCGAAAGCGCAAACTTATTAATTAACTAAGTTTAAGTACTGTTT
TGGAAGCAATCTGACGATCAGAGATGGTAACAATGGAGGAGATTAGAAAG
GCTCAGCGAGCCGAGGGCCTGGCGACCATCCTCGCCATCAGCACGGCAAC
GCCGCCCAATTGTGTCATCCAAGCTGATTATCCTGACTATTACTTCGGGA
TCACCAACAGCGAGCACATGACTGAGCTCAAAGAGAAGTTCAAGCTCTTG
TGTGAGAAGTCGATGATAAGAAAGCGTCACATGTGCTTAACAGAAGAGAT
TTTAAAAGCAAACCCTAATATGTGCTTACACATGGGGACATCACTCGATG
CGCGCCAGGACATTTCTCTTGTTGAAGTACCAAAGCTTGGCAAAGAGGCG
GCAACCAAAGCTATCAAAGAATGGGGACAGCCCAAATCCAATATCACCCA
TCTCATTTTCTGCACATCTGCAGGCGTCGACATGCCTGGCGCTGACTATC
AGCTCACAAGACTCATCGGCCTCAACCCGGATGTTAAGCGTATGATGATA
TATCAACAAGGGTGTTATGCTGGCGCCACCATCCTTCGTCTTGCTAAAGA
TTTGGCTGAAAACAACAGGGCTCTCGTGTTCTTGTTGTTTGTTCTGAGAA
CACAATCCCCACTTTCCGTGGGCCGTCTTATACCCATATTGATTC
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