FC931653

Overview
NameFC931653
Unique NameFC931653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSY_EQUAR (Chalcone synthase OS=Equisetum arvense GN=CHS PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 2.982e-67
Identity = 117/192 (60.94%), Postives = 142/192 (73.96%), Query Frame = 2
Query:   44 TVLEAI*RSEMVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            TVLE     E       R AQRA G AT+LAI TA P N   Q+ YPD+YF ITNS+HMT            S I+KR+M L  EILKANP++C +   SLD RQDI++VEVPKLGKEA+ KAIKEWGQPKS ITHL+FCT++GVDMPGAD+ LT+L+GL P VKR+M+YQQGC+AG T+LR+AKD+AENN+
Sbjct:    2 TVLE-----ESADASSRRLAQRANGPATVLAIGTANPANVFEQSSYPDFYFDITNSQHMTELKLKFSRMCQKSGIKKRYMHLNSEILKANPSLCAYWEKSLDVRQDIAVVEVPKLGKEASLKAIKEWGQPKSKITHLVFCTTSGVDMPGADWALTKLLGLRPSVKRLMMYQQGCFAGGTVLRVAKDVAENNK 188          

HSP 2 Score: 42.3578 bits (98), Expect = 2.982e-67
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  188 KGARVLVVCSEITCVTFRGPSETHLD 213          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: 2PS_GERHY (2-pyrone synthase OS=Gerbera hybrida GN=2PS PE=1 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 1.125e-66
Identity = 117/179 (65.36%), Postives = 137/179 (76.54%), Query Frame = 2
Query:   83 MEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            +E IR+A RA+GLATILAI TATPPNCV QADY DYYF +T SEHM             + I+KR++ LTE+ L+ NP MC  M  SL+ARQD+ +  VP LGKEAA KAI EWG PKS ITHLIFCT+AGVDMPGADYQL +L+GL+P VKR M+YQQGC AG T+LRLAKDLAENN+
Sbjct:    9 VEVIREAGRAQGLATILAIGTATPPNCVAQADYADYYFRVTKSEHMVDLKEKFKRICEKTAIKKRYLALTEDYLQENPTMCEFMAPSLNARQDLVVTGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQLVKLLGLSPSVKRYMLYQQGCAAGGTVLRLAKDLAENNK 187          

HSP 2 Score: 35.4242 bits (80), Expect = 1.125e-66
Identity = 15/26 (57.69%), Postives = 19/26 (73.08%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +GSRVL+VCSE T   F GP+  H+D
Sbjct:  187 KGSRVLIVCSEITAILFHGPNENHLD 212          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: THS2_VITVI (Stilbene synthase 2 OS=Vitis vinifera GN=GSVIVT00004047001 PE=2 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 1.125e-66
Identity = 114/181 (62.98%), Postives = 141/181 (77.90%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENN 616
            M ++EEIR AQRA+G ATILAI TATP +CV Q+DY DYYF +T SEHMT            SMI+KR++ LTEE+L+ +PN+  +M  SL+ RQ+I   EVPKLGKEAA KA+KEWGQPKS ITHL+FCT++GV+MPGADY+L  L+GL P V+R+M+Y QGCYAG T+LR AKDLAENN
Sbjct:    1 MASVEEIRNAQRAKGPATILAIGTATPDHCVYQSDYADYYFRVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENN 181          

HSP 2 Score: 37.3502 bits (85), Expect = 1.125e-66
Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = 1
Query:  619 GSRVLVVCSENTIPTFRGPSYTHID 693
            G+RVLVVCSE T+ TFRGPS   +D
Sbjct:  183 GARVLVVCSEITVVTFRGPSEDALD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS1_MEDSA (Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.378e-66
Identity = 126/198 (63.64%), Postives = 154/198 (77.78%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNRALVFLLFVLRTQSPLS 667
            MV++ EIR+AQRAEG ATI+AI TA P NCV Q+ YPD+YF ITNSEH              SMI++R+M LTEEILK NP +C +M  SL ARQD+++V VP+LGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN+    +L V   ++P++
Sbjct:    1 MVSVAEIRQAQRAEGPATIMAIGTANPANCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYMYLTEEILKDNPRVCEYMAPSLAARQDMAVVVVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKG-ARVLVVCSEETPVT 197          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: THS4_VITVI (Stilbene synthase 4 OS=Vitis vinifera GN=GSVIVT00005194001 PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 2.494e-66
Identity = 112/181 (61.88%), Postives = 141/181 (77.90%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENN 616
            M ++EEIR AQRA+G AT+LAI TATP NC+ Q+D+ DYYF +T SEHMT            SMI+KR++ LTEE+L+ +PN+  +M  SL+ RQ+I   EVPKLGKEAA KA+KEWGQPKS ITHL+FCT++GV+MPGADY+L  L+GL P V+R+M+Y QGCYAG T+LR AKDLAENN
Sbjct:    1 MASVEEIRNAQRAKGPATVLAIGTATPDNCLYQSDFADYYFRVTKSEHMTELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENN 181          

HSP 2 Score: 37.3502 bits (85), Expect = 2.494e-66
Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = 1
Query:  619 GSRVLVVCSENTIPTFRGPSYTHID 693
            G+RVLVVCSE T+ TFRGPS   +D
Sbjct:  183 GARVLVVCSEITVVTFRGPSEDALD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: THS5_VITVI (Stilbene synthase 5 OS=Vitis vinifera GN=GSVIVT00007357001 PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 9.405e-66
Identity = 113/181 (62.43%), Postives = 140/181 (77.35%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENN 616
            M ++EEIR AQRA+G ATILAI TATP +CV Q+DY DYYF +T SEHMT            SMI+KR++ LTEE+L+ +PN+  +M  SL+ RQ+I   EVPKLGKEAA KA+KEWGQPKS ITHL+FCT++GV+MPGADY+L  L+GL   V+R+M+Y QGCYAG T+LR AKDLAENN
Sbjct:    1 MASVEEIRNAQRAKGPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLETSVRRVMLYHQGCYAGGTVLRTAKDLAENN 181          

HSP 2 Score: 37.3502 bits (85), Expect = 9.405e-66
Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = 1
Query:  619 GSRVLVVCSENTIPTFRGPSYTHID 693
            G+RVLVVCSE T+ TFRGPS   +D
Sbjct:  183 GARVLVVCSEITVVTFRGPSEDALD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSG_PETHY (Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=2 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 1.025e-64
Identity = 116/182 (63.74%), Postives = 139/182 (76.37%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            M T+EEIRKAQRAEG AT+LAI TA P NCV Q+ YPD+ F IT S+H T            SMI+KR++ LTEEILK NPN+C H   SL+ARQ+I++ E PKLGK AA KAI+EW Q KS ITHL+FCT+  V++PGADYQLT+L+GL+P VKR M+YQQGCY G T LRLAKDLAENN+
Sbjct:    1 MATVEEIRKAQRAEGPATVLAIGTANPSNCVDQSAYPDFLFRITTSDHKTELKEKFKHMCEGSMIKKRYLHLTEEILKNNPNICEHKAPSLNARQEIAVAEAPKLGKRAAQKAIEEWSQSKSKITHLVFCTTTSVELPGADYQLTKLLGLSPSVKRSMMYQQGCYGGGTALRLAKDLAENNK 182          

HSP 2 Score: 29.6462 bits (65), Expect = 1.025e-64
Identity = 13/26 (50.00%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVC E T+ +F+ PS    D
Sbjct:  182 KGARVLVVCVEITVMSFQAPSRNDTD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: THS7_VITVI (Stilbene synthase 6 OS=Vitis vinifera GN=STS PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 2.964e-64
Identity = 109/181 (60.22%), Postives = 139/181 (76.80%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENN 616
            M ++EE R AQRA+G ATILAI TATP +CV Q+DY DYYF +T SEHMT            SMI+KR++ LTEE+L+ +PN+  +M  SL+ RQ+I   EVP+LG++AA KA+KEWGQPKS ITHL+FCT++GV+MPGADY+L  L+GL   V+R+M+Y QGCYAG T+LR AKDLAENN
Sbjct:    1 MASVEEFRNAQRAKGPATILAIGTATPDHCVYQSDYADYYFRVTKSEHMTELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPRLGRDAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLETSVRRVMLYHQGCYAGGTVLRTAKDLAENN 181          

HSP 2 Score: 37.3502 bits (85), Expect = 2.964e-64
Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = 1
Query:  619 GSRVLVVCSENTIPTFRGPSYTHID 693
            G+RVLVVCSE T+ TFRGPS   +D
Sbjct:  183 GARVLVVCSEITVVTFRGPSEDALD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: THS1_VITVI (Stilbene synthase 1 OS=Vitis vinifera GN=VINST1 PE=1 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 2.964e-64
Identity = 109/181 (60.22%), Postives = 139/181 (76.80%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENN 616
            M ++EE R AQRA+G ATILAI TATP +CV Q+DY DYYF +T SEHMT            SMI+KR++ LTEE+L+ +PN+  +M  SL+ RQ+I   EVP+LG++AA KA+KEWGQPKS ITHL+FCT++GV+MPGADY+L  L+GL   V+R+M+Y QGCYAG T+LR AKDLAENN
Sbjct:    1 MASVEEFRNAQRAKGPATILAIGTATPDHCVYQSDYADYYFRVTKSEHMTELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPRLGRDAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLETSVRRVMLYHQGCYAGGTVLRTAKDLAENN 181          

HSP 2 Score: 37.3502 bits (85), Expect = 2.964e-64
Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = 1
Query:  619 GSRVLVVCSENTIPTFRGPSYTHID 693
            G+RVLVVCSE T+ TFRGPS   +D
Sbjct:  183 GARVLVVCSEITVVTFRGPSEDALD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: DPS1_PINST (Pinosylvin synthase 1 OS=Pinus strobus GN=STS1 PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 6.571e-64
Identity = 107/182 (58.79%), Postives = 134/182 (73.63%), Query Frame = 2
Query:   77 VTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGT-SLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            + +E  RK+QRA+G A+ILAI TA PPN V Q+ YPDYYF +TN+E  T            S I+KRHM LTEEILK NP +C  +   SLD RQ +   EVP+LGKEAA KAI+EWGQPKS ITHLIFCT+   D+PGAD+++ +L+GL+P VKR+ ++Q GC+AG T+LRLAKDLAENNR
Sbjct:    7 IDLEAFRKSQRADGFASILAIGTANPPNVVDQSTYPDYYFRVTNNEDNTDLKDKFKRICERSAIKKRHMYLTEEILKKNPELCAFLEVPSLDTRQAMLAAEVPRLGKEAAEKAIEEWGQPKSRITHLIFCTTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRLAKDLAENNR 188          

HSP 2 Score: 45.8246 bits (107), Expect = 6.571e-64
Identity = 20/26 (76.92%), Postives = 23/26 (88.46%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSENT  TFRGPS TH+D
Sbjct:  188 RGARVLVVCSENTAVTFRGPSETHLD 213          
The following BLAST results are available for this feature:
BLAST of FC931653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSY_EQUAR2.982e-6760.94Chalcone synthase OS=Equisetum arvense GN=CHS PE=2... [more]
2PS_GERHY1.125e-6665.362-pyrone synthase OS=Gerbera hybrida GN=2PS PE=1 S... [more]
THS2_VITVI1.125e-6662.98Stilbene synthase 2 OS=Vitis vinifera GN=GSVIVT000... [more]
CHS1_MEDSA2.378e-6663.64Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=... [more]
THS4_VITVI2.494e-6661.88Stilbene synthase 4 OS=Vitis vinifera GN=GSVIVT000... [more]
THS5_VITVI9.405e-6662.43Stilbene synthase 5 OS=Vitis vinifera GN=GSVIVT000... [more]
CHSG_PETHY1.025e-6463.74Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=... [more]
THS7_VITVI2.964e-6460.22Stilbene synthase 6 OS=Vitis vinifera GN=STS PE=2 ... [more]
THS1_VITVI2.964e-6460.22Stilbene synthase 1 OS=Vitis vinifera GN=VINST1 PE... [more]
DPS1_PINST6.571e-6458.79Pinosylvin synthase 1 OS=Pinus strobus GN=STS1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34107E08EF PostHarvP1 Citrus clementina cDNA clone C34107E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931653 ID=FC931653; Name=FC931653; organism=Citrus clementina; type=EST; length=695bp
ACAATCGCGAAAGCGCAAACTTATTAATTAACTAAGTTTAAGTACTGTTT
TGGAAGCAATCTGACGATCAGAGATGGTAACAATGGAGGAGATTAGAAAG
GCTCAGCGAGCCGAGGGCCTGGCGACCATCCTCGCCATCAGCACGGCAAC
GCCGCCCAATTGTGTCATCCAAGCTGATTATCCTGACTATTACTTCGGGA
TCACCAACAGCGAGCACATGACTGAGCTCAAAGAGAAGTTCAAGCTCTTG
TGTGAGAAGTCGATGATAAGAAAGCGTCACATGTGCTTAACAGAAGAGAT
TTTAAAAGCAAACCCTAATATGTGCTTACACATGGGGACATCACTCGATG
CGCGCCAGGACATTTCTCTTGTTGAAGTACCAAAGCTTGGCAAAGAGGCG
GCAACCAAAGCTATCAAAGAATGGGGACAGCCCAAATCCAATATCACCCA
TCTCATTTTCTGCACATCTGCAGGCGTCGACATGCCTGGCGCTGACTATC
AGCTCACAAGACTCATCGGCCTCAACCCGGATGTTAAGCGTATGATGATA
TATCAACAAGGGTGTTATGCTGGCGCCACCATCCTTCGTCTTGCTAAAGA
TTTGGCTGAAAACAACAGGGCTCTCGTGTTCTTGTTGTTTGTTCTGAGAA
CACAATCCCCACTTTCCGTGGGCCGTCTTATACCCATATTGATTC
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