FC931653

Overview
NameFC931653
Unique NameFC931653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9408 contig Ccv1_Contig9408:5..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS2_IPOBA (Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF2 PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 1.244e-77
Identity = 131/188 (69.68%), Postives = 152/188 (80.85%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNRALVFLL 637
            MVT+EE+RKAQRAEG ATILAI T TP NCV Q+ YPDYYF ITNSEH T            SMI KR+M LTEEILK NP+ C +M  SLDARQDI++VEVPKLGKEAA  AIKEWGQPKS ITH++FCT++GVDMPGADYQLT+L+GL+P VKR+M+YQQGC+AG T+LRLAKDLAENN+    L+
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLSPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLI 188          

HSP 2 Score: 43.5134 bits (101), Expect = 1.244e-77
Identity = 18/26 (69.23%), Postives = 23/26 (88.46%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVL+VCSE T+ TFRGPS TH+D
Sbjct:  182 KGARVLIVCSEITVVTFRGPSETHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS4_IPOBA (Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF4 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.622e-77
Identity = 131/188 (69.68%), Postives = 151/188 (80.32%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNRALVFLL 637
            MVT+EE+RKAQRAEG ATILAI T TP NCV Q+ YPDYYF ITNSEH T            SMI KR+M LTEEILK NP+ C +M  SLDARQDI++VEVPKLGKEAA  AIKEWGQPKS ITH++FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAENN+    L+
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKERFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLI 188          

HSP 2 Score: 43.5134 bits (101), Expect = 1.622e-77
Identity = 18/26 (69.23%), Postives = 23/26 (88.46%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVL+VCSE T+ TFRGPS TH+D
Sbjct:  182 KGARVLIVCSEITVVTFRGPSETHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS2_SOLTU (Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 1.622e-77
Identity = 131/182 (71.98%), Postives = 152/182 (83.52%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MVT+EE+RKAQRA+G ATI+AI TATP NCV Q+ YPDYYF ITNSEHMT            SMI KR+M LTEEILK NPN+C +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITH++FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T++RLAKDLAENN+
Sbjct:    1 MVTVEEVRKAQRAKGPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMINKRYMHLTEEILKENPNICEYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVIRLAKDLAENNK 182          

HSP 2 Score: 39.6614 bits (91), Expect = 1.622e-77
Identity = 18/26 (69.23%), Postives = 21/26 (80.77%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TF GPS TH+D
Sbjct:  182 KGARVLVVCSEITAVTFSGPSDTHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSB_SOLTU (Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 1.622e-77
Identity = 132/182 (72.53%), Postives = 149/182 (81.87%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MVT+EE RKAQRAEG ATILAI T+TP NCV Q+ YPDYYF ITNSEH T            SMI+KR+M LTEEILK NPNMC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPG DYQL +L+GL P VKR+M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGCDYQLAKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 40.817 bits (94), Expect = 1.622e-77
Identity = 18/26 (69.23%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS +H+D
Sbjct:  182 KGARVLVVCSEITAVTFRGPSESHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS1_IPOBA (Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF1 PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 2.116e-77
Identity = 130/188 (69.15%), Postives = 151/188 (80.32%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNRALVFLL 637
            MVT+EE+RKAQRAEG ATILAI T TP NCV Q+ YPDYYF ITNSEH T            SMI KR+M LTEEILK NP+ C +M  SLDARQDI++VEVPKLGKEAA  AIKEWGQPKS ITH++FCT++G+DMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAENN+    L+
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGIDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLI 188          

HSP 2 Score: 43.5134 bits (101), Expect = 2.116e-77
Identity = 18/26 (69.23%), Postives = 23/26 (88.46%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVL+VCSE T+ TFRGPS TH+D
Sbjct:  182 KGARVLIVCSEITVVTFRGPSETHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS8_IPOBA (Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DIV PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 2.116e-77
Identity = 130/188 (69.15%), Postives = 151/188 (80.32%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNRALVFLL 637
            MVT+EE+RKAQRAEG ATILAI T TP NCV Q+ YPDYYF ITNSEH T            SMI KR+M LTEEILK NP+ C +M  SLDARQDI++VEVPKLGKEAA  AIKEWGQPKS ITH++FCT++G+DMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAENN+    L+
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGIDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLI 188          

HSP 2 Score: 43.5134 bits (101), Expect = 2.116e-77
Identity = 18/26 (69.23%), Postives = 23/26 (88.46%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVL+VCSE T+ TFRGPS TH+D
Sbjct:  182 KGARVLIVCSEITVVTFRGPSETHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSY_CARAN (Chalcone synthase OS=Cardamine amara GN=CHS PE=3 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.759e-77
Identity = 131/180 (72.78%), Postives = 148/180 (82.22%), Query Frame = 2
Query:   80 TMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            +++EIRKAQRA+G A ILAI TA P N VIQA+YPDYYF ITNSEHMT            S IRKRHM +TEE LK NPNMC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAENNR
Sbjct:    8 SLDEIRKAQRADGPAGILAIGTANPANYVIQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHVTEEFLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNR 187          

HSP 2 Score: 41.9726 bits (97), Expect = 2.759e-77
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  187 RGARVLVVCSEITAVTFRGPSDTHLD 212          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSJ_PETHY (Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=2 SV=2)

HSP 1 Score: 269.626 bits (688), Expect = 2.760e-77
Identity = 132/182 (72.53%), Postives = 151/182 (82.97%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MVT+EEIR+AQRAEG ATI+AI TATP NCV Q+ YPDYYF ITNSEH T            SMI+KR+M LTEEILK NPN+C +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL   VKR+M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVTVEEIRRAQRAEGPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYMHLTEEILKENPNICEYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRLMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 40.817 bits (94), Expect = 2.760e-77
Identity = 18/26 (69.23%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGP+ TH+D
Sbjct:  182 KGARVLVVCSEITAVTFRGPNDTHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSA_PETHY (Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 2.760e-77
Identity = 131/182 (71.98%), Postives = 150/182 (82.42%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MVT+EE RKAQRAEG AT++AI TATP NCV Q+ YPDYYF ITNSEH T            SMI+KR+M LTEEILK NP+MC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPG DYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVTVEEYRKAQRAEGPATVMAIGTATPTNCVDQSTYPDYYFRITNSEHKTDLKEKFKRMCEKSMIKKRYMHLTEEILKENPSMCEYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGCDYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 40.817 bits (94), Expect = 2.760e-77
Identity = 18/26 (69.23%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGP+ TH+D
Sbjct:  182 KGARVLVVCSEITAVTFRGPNDTHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS1_RUTGR (Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 3.599e-77
Identity = 133/181 (73.48%), Postives = 147/181 (81.22%), Query Frame = 2
Query:   77 VTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            VT+E IRKAQRA+G A +LAI TATP N V QADYPDYYF IT SEHMT            SMIRKR+M LTE+ILK NPNMC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPG DYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENNR
Sbjct:    4 VTVEAIRKAQRADGPAAVLAIGTATPANYVTQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIRKRYMHLTEDILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGCDYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNR 184          

HSP 2 Score: 40.817 bits (94), Expect = 3.599e-77
Identity = 18/26 (69.23%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGP+ TH+D
Sbjct:  184 RGARVLVVCSEITAVTFRGPADTHLD 209          
The following BLAST results are available for this feature:
BLAST of FC931653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS2_IPOBA1.244e-7769.68Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS4_IPOBA1.622e-7769.68Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS2_SOLTU1.622e-7771.98Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 P... [more]
CHSB_SOLTU1.622e-7772.53Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B... [more]
CHS1_IPOBA2.116e-7769.15Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS8_IPOBA2.116e-7769.15Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DI... [more]
CHSY_CARAN2.759e-7772.78Chalcone synthase OS=Cardamine amara GN=CHS PE=3 S... [more]
CHSJ_PETHY2.760e-7772.53Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=... [more]
CHSA_PETHY2.760e-7771.98Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=... [more]
CHS1_RUTGR3.599e-7773.48Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34107E08EF PostHarvP1 Citrus clementina cDNA clone C34107E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931653 ID=FC931653; Name=FC931653; organism=Citrus clementina; type=EST; length=695bp
ACAATCGCGAAAGCGCAAACTTATTAATTAACTAAGTTTAAGTACTGTTT
TGGAAGCAATCTGACGATCAGAGATGGTAACAATGGAGGAGATTAGAAAG
GCTCAGCGAGCCGAGGGCCTGGCGACCATCCTCGCCATCAGCACGGCAAC
GCCGCCCAATTGTGTCATCCAAGCTGATTATCCTGACTATTACTTCGGGA
TCACCAACAGCGAGCACATGACTGAGCTCAAAGAGAAGTTCAAGCTCTTG
TGTGAGAAGTCGATGATAAGAAAGCGTCACATGTGCTTAACAGAAGAGAT
TTTAAAAGCAAACCCTAATATGTGCTTACACATGGGGACATCACTCGATG
CGCGCCAGGACATTTCTCTTGTTGAAGTACCAAAGCTTGGCAAAGAGGCG
GCAACCAAAGCTATCAAAGAATGGGGACAGCCCAAATCCAATATCACCCA
TCTCATTTTCTGCACATCTGCAGGCGTCGACATGCCTGGCGCTGACTATC
AGCTCACAAGACTCATCGGCCTCAACCCGGATGTTAAGCGTATGATGATA
TATCAACAAGGGTGTTATGCTGGCGCCACCATCCTTCGTCTTGCTAAAGA
TTTGGCTGAAAACAACAGGGCTCTCGTGTTCTTGTTGTTTGTTCTGAGAA
CACAATCCCCACTTTCCGTGGGCCGTCTTATACCCATATTGATTC
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