FC931653

Overview
NameFC931653
Unique NameFC931653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9408 contig Ccv1_Contig9408:5..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS3_GERHY (Chalcone synthase 3 OS=Gerbera hybrida GN=CHS3 PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.137e-75
Identity = 129/182 (70.88%), Postives = 148/182 (81.32%), Query Frame = 2 
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            ++ +E IRKAQRAEG ATILAI TATP NCV QADYPDYYF +T SEHM             SMIRKR+M +TEE LK NP+MC  M  SLDARQD+ +VEVPKLGKEAATKAIKEWG PKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    7 VIDVETIRKAQRAEGPATILAIGTATPANCVYQADYPDYYFRVTESEHMVDLKEKFQRMCDKSMIRKRYMHITEEFLKENPSMCKFMAPSLDARQDLVVVEVPKLGKEAATKAIKEWGFPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNK 188

HSP 2 Score: 38.5058 bits (88), Expect = 1.137e-75
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 1 
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGP+  H+D
Sbjct:  188 KGARVLVVCSEITAVTFRGPNEGHLD 213
[Close]
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSJ (Chalcone synthase OS=Oryza sativa subsp. japonica GN=CHS PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.137e-75
Identity = 127/181 (70.17%), Postives = 148/181 (81.77%), Query Frame = 2 
Query:   77 VTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            VT+EE+R+AQRAEG AT+LAI TATP NCV QADYPDYYF IT SEHM             S IRKR+M LTEEIL+ NPNMC +M  SLDARQDI +VEVPKLGK AA KAIKEWGQP+S ITHL+FCT++GVDMPGADYQL +++GL P+V R+M+YQQGC+AG T+LR+AKDLAENNR
Sbjct:    5 VTVEEVRRAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIRKRYMHLTEEILQENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSRITHLVFCTTSGVDMPGADYQLAKMLGLRPNVNRLMMYQQGCFAGGTVLRVAKDLAENNR 185

HSP 2 Score: 39.2762 bits (90), Expect = 1.137e-75
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 1 
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVL VCSE T  TFRGPS +H+D
Sbjct:  185 RGARVLAVCSEITAVTFRGPSESHLD 210
[Close]
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSI (Chalcone synthase OS=Oryza sativa subsp. indica GN=CHS PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.137e-75
Identity = 127/181 (70.17%), Postives = 148/181 (81.77%), Query Frame = 2 
Query:   77 VTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            VT+EE+R+AQRAEG AT+LAI TATP NCV QADYPDYYF IT SEHM             S IRKR+M LTEEIL+ NPNMC +M  SLDARQDI +VEVPKLGK AA KAIKEWGQP+S ITHL+FCT++GVDMPGADYQL +++GL P+V R+M+YQQGC+AG T+LR+AKDLAENNR
Sbjct:    5 VTVEEVRRAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIRKRYMHLTEEILQENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSRITHLVFCTTSGVDMPGADYQLAKMLGLRPNVSRLMMYQQGCFAGGTVLRVAKDLAENNR 185

HSP 2 Score: 39.2762 bits (90), Expect = 1.137e-75
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 1 
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVL VCSE T  TFRGPS +H+D
Sbjct:  185 RGARVLAVCSEITAVTFRGPSESHLD 210
[Close]
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS2_MAIZE (Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 1.137e-75
Identity = 127/181 (70.17%), Postives = 146/181 (80.66%), Query Frame = 2 
Query:   77 VTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            VT+EE+RKAQRA G AT+LAI TATP NCV QADYPDYYF IT SEH+T            SMIRKR+M LTEE L  NP+MC +M  SLDARQD+ +VEVPKLGK AA KAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+ +GL P V R+M+YQQGC+AG T+LR+AKDLAENNR
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVYQADYPDYYFRITKSEHLTDLKEKFKRMCDKSMIRKRYMHLTEEFLAENPSMCAYMAPSLDARQDVVVVEVPKLGKAAAQKAIKEWGQPKSRITHLVFCTTSGVDMPGADYQLTKALGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNR 186

HSP 2 Score: 40.817 bits (94), Expect = 1.137e-75
Identity = 18/26 (69.23%), Postives = 22/26 (84.62%), Query Frame = 1 
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS +H+D
Sbjct:  186 RGARVLVVCSEITAVTFRGPSESHLD 211
[Close]
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSY_PETCR (Chalcone synthase OS=Petroselinum crispum GN=CHS PE=3 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 3.291e-75
Identity = 128/178 (71.91%), Postives = 145/178 (81.46%), Query Frame = 2 
Query:   83 MEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENN 616
            +EEIR  QRA+G A ILAI TATP NCV QADYPDYYF ITNSEHMT            SMIRKR+M +TEE LK NPN+C +   SLDARQD+ +VEVP+LGKEAA+KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN
Sbjct:    9 IEEIRNRQRAQGPANILAIGTATPSNCVYQADYPDYYFRITNSEHMTDLKLKFKRMCEKSMIRKRYMHITEEYLKENPNVCAYEAPSLDARQDLVVVEVPRLGKEAASKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENN 186

HSP 2 Score: 40.0466 bits (92), Expect = 3.291e-75
Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 1 
Query:  619 GSRVLVVCSENTIPTFRGPSYTHID 693
            G+RVLVVCSE T  TFRGPS +H+D
Sbjct:  188 GARVLVVCSEITAVTFRGPSDSHLD 212
[Close]
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSY_CALCH (Chalcone synthase OS=Callistephus chinensis GN=CHS PE=2 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 3.291e-75
Identity = 128/181 (70.72%), Postives = 146/181 (80.66%), Query Frame = 2 
Query:   77 VTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            + +  IR+AQR +G ATILAI TATP NCV QADYPDYYF IT SEHM             SMIRKR+M LTEE LK NP++C +M  SLDARQD+ +VEVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    5 IDIAAIREAQRRQGPATILAIGTATPSNCVYQADYPDYYFRITKSEHMVDLKEKFKRMCDKSMIRKRYMHLTEEYLKENPSLCEYMAPSLDARQDVVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNK 185

HSP 2 Score: 40.817 bits (94), Expect = 3.291e-75
Identity = 18/26 (69.23%), Postives = 22/26 (84.62%), Query Frame = 1 
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGP+ TH+D
Sbjct:  185 KGARVLVVCSEITAVTFRGPNDTHLD 210
[Close]
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSY_ARATH (Chalcone synthase OS=Arabidopsis thaliana GN=CHS PE=1 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.291e-75
Identity = 126/180 (70.00%), Postives = 147/180 (81.67%), Query Frame = 2 
Query:   80 TMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            +++EIR+AQRA+G A ILAI TA P N V+QA+YPDYYF ITNSEHMT            S IRKRHM LTEE LK NP+MC +M  SLD RQDI +VEVPKLGKEAA KAIKEWGQPKS ITH++FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LR+AKDLAENNR
Sbjct:    8 SLDEIRQAQRADGPAGILAIGTANPENHVLQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHLTEEFLKENPHMCAYMAPSLDTRQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRIAKDLAENNR 187

HSP 2 Score: 41.9726 bits (97), Expect = 3.291e-75
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1 
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  187 RGARVLVVCSEITAVTFRGPSDTHLD 212
[Close]
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSY_PINSY (Chalcone synthase OS=Pinus sylvestris GN=CHS PE=3 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 7.301e-75
Identity = 127/182 (69.78%), Postives = 147/182 (80.77%), Query Frame = 2 
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            M  +E  RKAQRA+G ATILAI TATPPN V Q+ YPDYYF ITNSEHMT            S I+KR+M LTEEILK NP +C +M  SLDARQD+ +VEVP+LGKEAA KAIKEWGQPKS ITH+IFCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LR+AKDLAENNR
Sbjct:    6 MKDLEAFRKAQRADGPATILAIGTATPPNAVDQSSYPDYYFKITNSEHMTELKEKFRRMCDKSAIKKRYMYLTEEILKENPKVCEYMAPSLDARQDMVVVEVPRLGKEAAAKAIKEWGQPKSKITHVIFCTTSGVDMPGADYQLTKLLGLRPSVKRVMMYQQGCFAGGTVLRVAKDLAENNR 187

HSP 2 Score: 41.9726 bits (97), Expect = 7.301e-75
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1 
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  187 RGARVLVVCSEITAVTFRGPSDTHLD 212
[Close]
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS1_SECCE (Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 7.301e-75
Identity = 129/181 (71.27%), Postives = 149/181 (82.32%), Query Frame = 2 
Query:   77 VTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            +T+EE+RKAQRAEG AT+LAI TATP NCV QADYPDYYF IT S+HM             S IRKR+M LTEEIL+ NPNMC +M  SLDARQDI +VEVPKLGK AA KAIKEWGQP+S ITHL+FCT++GVDMPGADYQLT+++GL P VKR+M+YQQGC+AG T+LRLAKDLAENNR
Sbjct:    5 MTVEEVRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFKITKSDHMADLKEKFKRMCDKSQIRKRYMHLTEEILQDNPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNR 185

HSP 2 Score: 33.4982 bits (75), Expect = 7.301e-75
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 1 
Query:  616 QGSRVLVVCSENTIPTFRGP 675
            +G+RVLVVCSE T  TFRGP
Sbjct:  185 RGARVLVVCSEITAVTFRGP 204
[Close]
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS7_SOYBN (Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 7.302e-75
Identity = 129/182 (70.88%), Postives = 147/182 (80.77%), Query Frame = 2 
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MV++ EIR+AQRAEG ATILAI TA PPN V Q+ YPDYYF ITNS+HMT            SMI+ R+M L EEILK NPNMC +M  SLDARQD+ +VEVPKLGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+ +GL P VKR M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVSVAEIRQAQRAEGPATILAIGTANPPNRVDQSTYPDYYFRITNSDHMTELKEKFQRMCDKSMIKTRYMYLNEEILKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKQLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182

HSP 2 Score: 41.9726 bits (97), Expect = 7.302e-75
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1 
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  182 KGARVLVVCSEITAVTFRGPSDTHLD 207
The following BLAST results are available for this feature:
BLAST of FC931653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS3_GERHY1.137e-7570.88Chalcone synthase 3 OS=Gerbera hybrida GN=CHS3 PE=... [more]
CHSY_ORYSJ1.137e-7570.17Chalcone synthase OS=Oryza sativa subsp. japonica ... [more]
CHSY_ORYSI1.137e-7570.17Chalcone synthase OS=Oryza sativa subsp. indica GN... [more]
CHS2_MAIZE1.137e-7570.17Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1[more]
CHSY_PETCR3.291e-7571.91Chalcone synthase OS=Petroselinum crispum GN=CHS P... [more]
CHSY_CALCH3.291e-7570.72Chalcone synthase OS=Callistephus chinensis GN=CHS... [more]
CHSY_ARATH3.291e-7570.00Chalcone synthase OS=Arabidopsis thaliana GN=CHS P... [more]
CHSY_PINSY7.301e-7569.78Chalcone synthase OS=Pinus sylvestris GN=CHS PE=3 ... [more]
CHS1_SECCE7.301e-7571.27Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3... [more]
CHS7_SOYBN7.302e-7570.88Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionC34107E08EF PostHarvP1 Citrus clementina cDNA clone C34107E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931653 ID=FC931653; Name=FC931653; organism=Citrus clementina; type=EST; length=695bp
ACAATCGCGAAAGCGCAAACTTATTAATTAACTAAGTTTAAGTACTGTTT
TGGAAGCAATCTGACGATCAGAGATGGTAACAATGGAGGAGATTAGAAAG
GCTCAGCGAGCCGAGGGCCTGGCGACCATCCTCGCCATCAGCACGGCAAC
GCCGCCCAATTGTGTCATCCAAGCTGATTATCCTGACTATTACTTCGGGA
TCACCAACAGCGAGCACATGACTGAGCTCAAAGAGAAGTTCAAGCTCTTG
TGTGAGAAGTCGATGATAAGAAAGCGTCACATGTGCTTAACAGAAGAGAT
TTTAAAAGCAAACCCTAATATGTGCTTACACATGGGGACATCACTCGATG
CGCGCCAGGACATTTCTCTTGTTGAAGTACCAAAGCTTGGCAAAGAGGCG
GCAACCAAAGCTATCAAAGAATGGGGACAGCCCAAATCCAATATCACCCA
TCTCATTTTCTGCACATCTGCAGGCGTCGACATGCCTGGCGCTGACTATC
AGCTCACAAGACTCATCGGCCTCAACCCGGATGTTAAGCGTATGATGATA
TATCAACAAGGGTGTTATGCTGGCGCCACCATCCTTCGTCTTGCTAAAGA
TTTGGCTGAAAACAACAGGGCTCTCGTGTTCTTGTTGTTTGTTCTGAGAA
CACAATCCCCACTTTCCGTGGGCCGTCTTATACCCATATTGATTC
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