FC931653

Overview
NameFC931653
Unique NameFC931653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9408 contig Ccv1_Contig9408:5..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS5_PEA (Chalcone synthase 5 OS=Pisum sativum GN=CHS5 PE=3 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 7.302e-75
Identity = 128/182 (70.33%), Postives = 148/182 (81.32%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MV++ EIRKAQRAEG ATILAI TA P NCV Q+ YPD+YF ITNSEH T            SMI +R+M LTEEILK NP++C +M  SLDARQD+ +VEVP+LGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFRITNSEHKTELKQKFQRMCDKSMINRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 41.9726 bits (97), Expect = 7.302e-75
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  182 KGARVLVVCSEVTAVTFRGPSDTHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS3_PEA (Chalcone synthase 3 OS=Pisum sativum GN=CHS3 PE=3 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 7.302e-75
Identity = 128/182 (70.33%), Postives = 148/182 (81.32%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MV++ EIRKAQRAEG ATILAI TA P NCV Q+ YPD+YF ITNSEH T            SMI +R+M LTEEILK NP++C +M  SLDARQD+ +VEVP+LGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFRITNSEHKTELKQKFQRMCDKSMINRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 41.9726 bits (97), Expect = 7.302e-75
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  182 KGARVLVVCSEVTAVTFRGPSDTHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS2_MEDSA (Chalcone synthase 2 OS=Medicago sativa GN=CHS2 PE=1 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 7.302e-75
Identity = 128/182 (70.33%), Postives = 148/182 (81.32%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MV++ EIRKAQRAEG ATILAI TA P NCV Q+ YPD+YF ITNSEH T            SMI++R+M LTEEILK NPN+C +M  SLDARQD+ +VEVP+LGKEAA KAIKEWGQPKS ITHLI CT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 41.9726 bits (97), Expect = 7.302e-75
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  182 KGARVLVVCSEVTAVTFRGPSDTHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS2_DAUCA (Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 1.242e-74
Identity = 127/178 (71.35%), Postives = 144/178 (80.90%), Query Frame = 2
Query:   83 MEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENN 616
            +EEIRK QRA+G A ILAI TATP NCV QADYPDYYF ITNSEHM+            SMIRKR+M +TEE LK NPN+C +   SLDARQD+ +VEVP+LGKEAA KAIKEWG PKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN
Sbjct:    8 IEEIRKRQRAQGPANILAIGTATPSNCVYQADYPDYYFRITNSEHMSDLKLKFKRMCEKSMIRKRYMHITEEYLKENPNVCAYEAPSLDARQDLVVVEVPRLGKEAAAKAIKEWGHPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENN 185          

HSP 2 Score: 40.0466 bits (92), Expect = 1.242e-74
Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 1
Query:  619 GSRVLVVCSENTIPTFRGPSYTHID 693
            G+RVLVVCSE T  TFRGPS +H+D
Sbjct:  187 GARVLVVCSEITAVTFRGPSDSHLD 211          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS1_PEA (Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.242e-74
Identity = 127/182 (69.78%), Postives = 148/182 (81.32%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MV++ EIRK QRAEG ATILAI TA P NCV Q+ YPD+YF ITNSEH T            SMI++R+M LTEEILK NP++C +M  SLDARQD+ +VEVP+LGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVSVSEIRKPQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTVLKEKFQRMCDKSMIKRRYMYLTEEILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 41.9726 bits (97), Expect = 1.242e-74
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  182 KGARVLVVCSEVTAVTFRGPSDTHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSY_PINST (Chalcone synthase OS=Pinus strobus GN=CHS PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 2.755e-74
Identity = 125/182 (68.68%), Postives = 147/182 (80.77%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            M  +E  RKAQRA+G ATILAI TATPPN V Q+ YPDYYF ITNSEHMT            S I+KR+M LTEEIL  NP++C +M  SLDARQD+ +VEVP+LGKEAA KAIKEWGQPKS ITH+IFCT++GVDMPGADYQ+T+L+GL P VKR+M+YQQGC+AG T+LR+AKDLAENNR
Sbjct:    6 MADLEAFRKAQRADGPATILAIGTATPPNAVDQSTYPDYYFKITNSEHMTELKEKFRRMCDKSGIKKRYMYLTEEILNENPSVCAYMAPSLDARQDMVVVEVPRLGKEAAAKAIKEWGQPKSKITHVIFCTTSGVDMPGADYQMTKLLGLRPSVKRVMMYQQGCFAGGTVLRVAKDLAENNR 187          

HSP 2 Score: 41.9726 bits (97), Expect = 2.755e-74
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  187 RGARVLVVCSEITAVTFRGPSDTHLD 212          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS4_MEDSA (Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=2 SV=2)

HSP 1 Score: 258.455 bits (659), Expect = 2.755e-74
Identity = 127/182 (69.78%), Postives = 148/182 (81.32%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MV++ EIRKAQRAEG ATILAI TA P NCV Q+ YPD+YF ITNSEH T            SMI++R+M LTEEILK NP++C +M  SLDARQD+ +VEVP+LGKEAA KAIKEWGQPKS ITHLI CT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 41.9726 bits (97), Expect = 2.755e-74
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  182 KGARVLVVCSEVTAVTFRGPSDTHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS2_PEA (Chalcone synthase 2 OS=Pisum sativum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 3.593e-74
Identity = 127/182 (69.78%), Postives = 148/182 (81.32%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MVT+ EIRKAQRAEG ATILAI TA P NCV Q+ YPD+YF ITNSEH T            SMI++R+M LTE+ILK NP++C +M  SLDARQD+ +VEVP+LGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+ RLAKDLAENN+
Sbjct:    1 MVTVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTVLKEKFQRMCDKSMIKRRYMYLTEDILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVFRLAKDLAENNK 182          

HSP 2 Score: 39.6614 bits (91), Expect = 3.593e-74
Identity = 18/26 (69.23%), Postives = 21/26 (80.77%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            + +RVLVVCSE T  TFRGPS TH+D
Sbjct:  182 KNARVLVVCSEVTAVTFRGPSDTHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSY_CATRO (Chalcone synthase OS=Catharanthus roseus GN=CHS PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 3.593e-74
Identity = 126/182 (69.23%), Postives = 148/182 (81.32%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MV +EEIR AQRA+G AT+LAI T+TP NCV Q+ YPDYYF ITNSEH T            SMI+KR+M LTEEIL+ NPN+C +M  SLDARQ+I +VEVPKLGKEAA KAIKEWGQ KS ITHL+FCT++GVDMPGADYQLT+L+GL   VKR+M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVNVEEIRNAQRAQGPATVLAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCEKSMIKKRYMHLTEEILQENPNICAYMAPSLDARQNIVVVEVPKLGKEAAQKAIKEWGQSKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRLMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 40.817 bits (94), Expect = 3.593e-74
Identity = 18/26 (69.23%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS +H+D
Sbjct:  182 KGARVLVVCSEITAVTFRGPSESHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS4_PEA (Chalcone synthase 4 OS=Pisum sativum GN=CHS4 PE=3 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.593e-74
Identity = 127/182 (69.78%), Postives = 147/182 (80.77%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MV++ EIRKAQRAEG ATILAI TA P NCV Q+ YPD+YF ITNSEH              SMI +R+M LTEEILK NP++C +M  SLDARQD+ +VEVP+LGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFRITNSEHKIELKQKFQRMCDKSMINRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 41.9726 bits (97), Expect = 3.593e-74
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  182 KGARVLVVCSEVTAVTFRGPSDTHLD 207          
The following BLAST results are available for this feature:
BLAST of FC931653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS5_PEA7.302e-7570.33Chalcone synthase 5 OS=Pisum sativum GN=CHS5 PE=3 ... [more]
CHS3_PEA7.302e-7570.33Chalcone synthase 3 OS=Pisum sativum GN=CHS3 PE=3 ... [more]
CHS2_MEDSA7.302e-7570.33Chalcone synthase 2 OS=Medicago sativa GN=CHS2 PE=... [more]
CHS2_DAUCA1.242e-7471.35Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 ... [more]
CHS1_PEA1.242e-7469.78Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 ... [more]
CHSY_PINST2.755e-7468.68Chalcone synthase OS=Pinus strobus GN=CHS PE=2 SV=... [more]
CHS4_MEDSA2.755e-7469.78Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=... [more]
CHS2_PEA3.593e-7469.78Chalcone synthase 2 OS=Pisum sativum GN=CHS2 PE=2 ... [more]
CHSY_CATRO3.593e-7469.23Chalcone synthase OS=Catharanthus roseus GN=CHS PE... [more]
CHS4_PEA3.593e-7469.78Chalcone synthase 4 OS=Pisum sativum GN=CHS4 PE=3 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34107E08EF PostHarvP1 Citrus clementina cDNA clone C34107E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931653 ID=FC931653; Name=FC931653; organism=Citrus clementina; type=EST; length=695bp
ACAATCGCGAAAGCGCAAACTTATTAATTAACTAAGTTTAAGTACTGTTT
TGGAAGCAATCTGACGATCAGAGATGGTAACAATGGAGGAGATTAGAAAG
GCTCAGCGAGCCGAGGGCCTGGCGACCATCCTCGCCATCAGCACGGCAAC
GCCGCCCAATTGTGTCATCCAAGCTGATTATCCTGACTATTACTTCGGGA
TCACCAACAGCGAGCACATGACTGAGCTCAAAGAGAAGTTCAAGCTCTTG
TGTGAGAAGTCGATGATAAGAAAGCGTCACATGTGCTTAACAGAAGAGAT
TTTAAAAGCAAACCCTAATATGTGCTTACACATGGGGACATCACTCGATG
CGCGCCAGGACATTTCTCTTGTTGAAGTACCAAAGCTTGGCAAAGAGGCG
GCAACCAAAGCTATCAAAGAATGGGGACAGCCCAAATCCAATATCACCCA
TCTCATTTTCTGCACATCTGCAGGCGTCGACATGCCTGGCGCTGACTATC
AGCTCACAAGACTCATCGGCCTCAACCCGGATGTTAAGCGTATGATGATA
TATCAACAAGGGTGTTATGCTGGCGCCACCATCCTTCGTCTTGCTAAAGA
TTTGGCTGAAAACAACAGGGCTCTCGTGTTCTTGTTGTTTGTTCTGAGAA
CACAATCCCCACTTTCCGTGGGCCGTCTTATACCCATATTGATTC
back to top