FC931659
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAE (Proteasome subunit alpha OS=Pyrobaculum aerophilum GN=psmA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.704e-29 Identity = 69/174 (39.66%), Postives = 103/174 (59.20%), Query Frame = 3 Query: 72 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE 587 YD +T +SP G+++QVEYA EAVK+G +G++ K VVL + S L SS +KI+ +D+H+ + +GL AD R+L Y R +++ + Y+ P+ V L + + Q TQ RP+GV LL+AG+D GA LY PSG Y Y A AIG+ S +LE+ ++ Sbjct: 9 YDRAITIFSPEGKIYQVEYAGEAVKRGWPTVGVKCKAGVVLTAEKRKISALFDSSSLEKIYLIDEHVAASPSGLLADARILIDYARDVALSHRFIYDEPIDVEFLTKAVCNLKQQYTQFGGARPFGVALLIAGVDRHGARLYQTDPSGVYIGYFATAIGAESGTITEFLEKNYK 182
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA72_DROME (Proteasome subunit alpha type-7-1A OS=Drosophila melanogaster GN=Pros28.1A PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.704e-29 Identity = 72/208 (34.62%), Postives = 119/208 (57.21%), Query Frame = 3 Query: 66 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG-AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 680 ++Y +T +SP G L QVEYA EAV++GS A+G+R VVLG + SE+ + +KI +D H+ +A AGLTAD R+L + EC ++ +E+ + + + LA Q TQ + +RP+G+ L+ G+D G A L++ PSG + EY+A A G + + + E+ + + +T+ D IK A+ A+ E Q ++ + Sbjct: 3 SRYGRALTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSEMQEDRTVRKISMLDRHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISCLIGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRALLEVTQMSQMRLEV 210
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA6_SOYBN (Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.704e-29 Identity = 73/199 (36.68%), Postives = 116/199 (58.29%), Query Frame = 3 Query: 72 YDTDVTTWSPAGRLFQVEYAMEAVKQ-GSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGL-DEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 656 Y+ +T +SP GRLFQVEYA +AVK G +IG+R K + + K +L + +F + ++G+ G+TAD R L + R+E + +TY +PV L +ADK+QV TQ ++ RP GV +V G+ DE G LY P+G+YF ++A + G + Q A +LE++ +N T E+ ++ A+ A++ LQ Sbjct: 9 YNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKLLDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISALQSVLQ 207
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA2_MOUSE (Proteasome subunit alpha type-2 OS=Mus musculus GN=Psma2 PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.704e-29 Identity = 72/210 (34.29%), Postives = 117/210 (55.71%), Query Frame = 3 Query: 57 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 680 M + Y +TT+SP+G+L Q+EYA+ AV G+ ++G+++ VVL K S L + K+ + HIG+ +G+ D RVL R Y Y+ P+P +LV ++A Q TQ RP+GV LL+ G +E +L+ + PSG YF ++A A+G KT+LE+R+ E ED I A++ ++E+ +G+ + +I Sbjct: 1 MAKRGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLE--LEDAIHTAILTLKESFEGQMTEDNI 208
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSMA_SULTO (Proteasome subunit alpha OS=Sulfolobus tokodaii GN=psmA PE=3 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 2.226e-29 Identity = 77/206 (37.38%), Postives = 114/206 (55.34%), Query Frame = 3 Query: 72 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVL-GCVNKANSELSSHQ-KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ-GETLKSS 677 YD +T +SP G L+QV+YA EAVK+G +G+++K VVL G KA L +K+F +DDH+G + AGL +DGR+L Y RS+ + + Y+ P+ + L ++D Q+ TQ RP+GV L++ G+D K L PSG + Y A AIG A Y E+ + + +D I + A+ TL+ GE L S Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTKAGVVLIGEKRKATQLLDVDSIEKVFILDDHVGCSFAGLASDGRILIDYARSQALQHRLIYDEPINIDYLTKLVSDVKQMYTQHGGVRPFGVALIIGGIDRGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEYFEKNYR--EDLNMQDTILLGIRALASTLKPGEKLAPS 213
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA5_DICDI (Proteasome subunit alpha type-5 OS=Dictyostelium discoideum GN=psmA5 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.907e-29 Identity = 76/206 (36.89%), Postives = 119/206 (57.77%), Query Frame = 3 Query: 63 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA------QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 656 R++YD V T+SP GRLFQVEYA+EA+K G IG++ + VVL + S L S +K+ ++D H+ A++GL AD R + + R E N+ + Y P+ V V + D A + + RP+GV LL+AG+DEKG LYY+ PSG + ++ A AIG+ S+ A+T L+ ++ T + K AL +++ ++ Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYALEAIKLG---IGVQCEEGVVLAVEKRLTSPLLEPSSIQKVVEIDYHLICALSGLVADARTIIDHARIETQNHRFNYNEPMGVESCVQSICDLALRFGENRNSGEERMSRPFGVALLIAGIDEKGPSLYYSDPSGTFTQFHAKAIGAGSEGAQTTLQEKYS--KTLTIAECQKLALTTLKQVME 205
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA2_RAT (Proteasome subunit alpha type-2 OS=Rattus norvegicus GN=Psma2 PE=1 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 2.907e-29 Identity = 72/210 (34.29%), Postives = 116/210 (55.24%), Query Frame = 3 Query: 57 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 680 M Y +TT+SP+G+L Q+EYA+ AV G+ ++G+++ VVL K S L + K+ + HIG+ +G+ D RVL R Y Y+ P+P +LV ++A Q TQ RP+GV LL+ G +E +L+ + PSG YF ++A A+G KT+LE+R+ E ED I A++ ++E+ +G+ + +I Sbjct: 1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLE--LEDAIHTAILTLKESFEGQMTEDNI 208
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA2_HUMAN (Proteasome subunit alpha type-2 OS=Homo sapiens GN=PSMA2 PE=1 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 2.907e-29 Identity = 72/210 (34.29%), Postives = 116/210 (55.24%), Query Frame = 3 Query: 57 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 680 M Y +TT+SP+G+L Q+EYA+ AV G+ ++G+++ VVL K S L + K+ + HIG+ +G+ D RVL R Y Y+ P+P +LV ++A Q TQ RP+GV LL+ G +E +L+ + PSG YF ++A A+G KT+LE+R+ E ED I A++ ++E+ +G+ + +I Sbjct: 1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLE--LEDAIHTAILTLKESFEGQMTEDNI 208
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA2_BOVIN (Proteasome subunit alpha type-2 OS=Bos taurus GN=PSMA2 PE=1 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 2.907e-29 Identity = 72/210 (34.29%), Postives = 116/210 (55.24%), Query Frame = 3 Query: 57 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 680 M Y +TT+SP+G+L Q+EYA+ AV G+ ++G+++ VVL K S L + K+ + HIG+ +G+ D RVL R Y Y+ P+P +LV ++A Q TQ RP+GV LL+ G +E +L+ + PSG YF ++A A+G KT+LE+R+ E ED I A++ ++E+ +G+ + +I Sbjct: 1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLE--LEDAIHTAILTLKESFEGQMTEDNI 208
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA5_MOUSE (Proteasome subunit alpha type-5 OS=Mus musculus GN=Psma5 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.797e-29 Identity = 75/205 (36.59%), Postives = 119/205 (58.05%), Query Frame = 3 Query: 63 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA-----QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 656 R++YD V T+SP GRLFQVEYA+EA+K GS AIG+++ V L + S L S +KI ++D HIG A++GL AD + L R E N+ +TY + V + +++ A + + RP+GV LL G+DEKG L++ PSG + + A AIGS S+ A++ L+ + T ++ IK +L+ +++ ++ Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYH--KSMTLKEAIKSSLIILKQVME 207 The following BLAST results are available for this feature:
BLAST of FC931659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931659 ID=FC931659; Name=FC931659; organism=Citrus clementina; type=EST; length=682bpback to top |