FC931659
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA6_DROME (Proteasome subunit alpha type-6 OS=Drosophila melanogaster GN=Prosalpha1 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 4.652e-19 Identity = 60/195 (30.77%), Postives = 102/195 (52.31%), Query Frame = 3 Query: 72 YDTDVTTWSPAGRLFQVEYAMEAVKQGS-AAIGLRSKTHVVLGCVNKANSE--LSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLD-EKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE-NFSESTREDLIKDALMAI 641 +D +T +SP GRL+QVEYA +A+ Q + + L+S V+ K + + +F++ IG A+ G AD R + R E N+ Y Y +PV L ++AD QV TQ + RP G +++ D E G +Y P+G + ++A ++G+++ A +YLE++++ N SE L L ++ Sbjct: 9 FDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAISCLSSV 203
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA6_YEAST (Proteasome component C7-alpha OS=Saccharomyces cerevisiae GN=SCL1 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.076e-19 Identity = 64/212 (30.19%), Postives = 108/212 (50.94%), Query Frame = 3 Query: 72 YDTDVTTWSPAGRLFQVEYAMEAVKQGSA-AIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-----ENFSESTREDLIKDALMAIRETLQGETLKSSI 680 YD +T +SP GRL+QVEYA +A Q + ++ +R K V+ K +L + IF + IG+ + G D R + ++E + Y Y +P L ++A+ +Q+ TQR++ RP GV L +DE+ G +Y P+G Y Y+A A G + Q T LE F ++ +E + E +++ A+ + + L E K+ + Sbjct: 12 YDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKIDHINEESWEKVVEFAITHMIDALGTEFSKNDL 223
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBB (Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.354e-17 Identity = 69/218 (31.65%), Postives = 110/218 (50.46%), Query Frame = 3 Query: 57 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQ-GSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGL---DEKGA---HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFEN--FSESTREDLIKDALMAIRETLQGETLKSS 677 M R +D +T +SP G L+QVEYA +AV G + +R K V++ + +L + ++ V+D+ GV I G DG+ L + R+E Y Y Y P+ V L D AQV TQ++ R G + G+ DE GA +Y P+G A A+G + A +LE++ +N F ++++ AL A++ L GE+L++S Sbjct: 1 MSRAGFDKYITVFSPEGSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKLMRPETITSLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMLVSVLAKPWQDMAQVRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAGG-AAVHACAVGKKQIEACAFLEKKQKNAPFHTLSQKEAAMIALAALQSAL-GESLRAS 216
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA6_CAEEL (Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.079e-15 Identity = 50/198 (25.25%), Postives = 96/198 (48.48%), Query Frame = 3 Query: 72 YDTDVTTWSPAGRLFQVEYAMEAVKQGS-AAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLD-EKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETL 653 +D +T +SP GR++QVEYA +A+ + A+ ++ V+ + L + ++++ +G G+ D + + + E ++ Y +P L ++AD Q TQ + R G LL D EKG +Y P+G Y + ++G + A ++LE++ + SE T + I+ A+ A++ +L Sbjct: 9 FDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEALQTSL 206
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSMB_METTH (Proteasome subunit beta OS=Methanobacterium thermoautotrophicum GN=psmB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 50/176 (28.41%), Postives = 84/176 (47.73%), Query Frame = 3 Query: 147 QGSAAIGLRSKTHVVLGCVNKAN-SELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGET 665 +G+ +G+ K VV +A+ L +H+ KIFK+D+HI IAG AD + L +Y+++E Y + + A+ S P+ V L+ G+DE GA +Y PSG + + GS S A LE R+ + E ++ + A+ AI+ ++ +T Sbjct: 8 KGTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIEAAAALAAN----ILHSSRFYPFIVQTLLGGVDENGAKIYSLDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSD--ELYVDEAVDVAIRAIKSAMERDT 177
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA1_ENCCU (Probable proteasome subunit alpha type-1 OS=Encephalitozoon cuniculi GN=PRE5 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 51/200 (25.50%), Postives = 95/200 (47.50%), Query Frame = 3 Query: 93 WSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGV-GLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIR------ETLQGETLK 671 ++P G + Q+++ + + G A+GL++++ VL N+ S L+ QKK+F +D +G+T DG + Y+ + + + + L T +R YGV GL + D G L P G+ E + IG R+Q+++T LE E + + E+L++ +MA++ + L GE ++ Sbjct: 22 FNPEGCVKQLDFIRQTTELGGTAVGLKNRSVGVLIAHNERRSRLADIQKKVFSIDRKSLFTFSGITNDGLQIVDYLIDKSVREEVIKGRAIHFLDVFEDLLRDVFERTILDGRRLYGVSGLYMTEYD--GIRLVEFNPKGHVREVKGMGIGCRAQSSRTVLEAYCEEYEKMGVEELVRIGIMALKNAHPEDDALTGENVE 219 The following BLAST results are available for this feature:
BLAST of FC931659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931659 ID=FC931659; Name=FC931659; organism=Citrus clementina; type=EST; length=682bpback to top |