FC931659
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA4_ARATH (Proteasome subunit alpha type-4 OS=Arabidopsis thaliana GN=PAC1 PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.592e-35 Identity = 82/206 (39.81%), Postives = 130/206 (63.11%), Query Frame = 3 Query: 69 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL---SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKS 674 +YD+ T +SP GRL+QVEYAMEA+ +AIG+ SK VVL K S+L S+ +K++K+DDH+ A+AG+ +D +L R + Y++ Y+ P+PV +LV L D Q TQ RP+GV L AG D+ G LY + PSGNY ++A A+G+ +QAA++ L++ +++ ++TRE+ ++ AL + +T+ +L S Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYKD--DATREEAVELALKVLTKTMDSTSLTS 207
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA4_PETHY (Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.048e-35 Identity = 81/206 (39.32%), Postives = 129/206 (62.62%), Query Frame = 3 Query: 69 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL---SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKS 674 +YD+ T +SP GRL+QVEYAMEA+ +AIG+ SK VVL K S+L S+ +K++K+DDH+ A+AG+ +D +L R + Y+++Y+ P+PV +LV L D Q TQ P+GV L AG D+ G L+ + PSGNY ++A AIG+ +QAA++ L++ +++ + TRE+ ++ AL + +T+ +L S Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGISSKDGVVLVGEKKVTSKLLQTSTSSEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQYGGLPPFGVSFLFAGWDKNFGFQLFMSDPSGNYAGWKAAAIGANNQAAQSMLKQDYKD--DITREEAVQLALKVLSKTMDSTSLTS 207
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSMA_SULIY (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=psmA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.347e-34 Identity = 83/197 (42.13%), Postives = 118/197 (59.90%), Query Frame = 3 Query: 72 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVN-KANSELSSHQ-KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 656 YD +T +SP G L+QV+YA EAVK+G AIG++SK+ VV+ KA S L +K+F +DDH+G + AGL +DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ RP+GV L++AG+D+ LY PSG Y YQA AIG A +LE+ ++ + T ED I AL A+ TL+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK--EDLTIEDTILLALKALSATLK 204
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSMA_SULIN (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=psmA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.347e-34 Identity = 83/197 (42.13%), Postives = 118/197 (59.90%), Query Frame = 3 Query: 72 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVN-KANSELSSHQ-KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 656 YD +T +SP G L+QV+YA EAVK+G AIG++SK+ VV+ KA S L +K+F +DDH+G + AGL +DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ RP+GV L++AG+D+ LY PSG Y YQA AIG A +LE+ ++ + T ED I AL A+ TL+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK--EDLTIEDTILLALKALSATLK 204
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSMA_SULIM (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=psmA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.347e-34 Identity = 83/197 (42.13%), Postives = 118/197 (59.90%), Query Frame = 3 Query: 72 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVN-KANSELSSHQ-KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 656 YD +T +SP G L+QV+YA EAVK+G AIG++SK+ VV+ KA S L +K+F +DDH+G + AGL +DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ RP+GV L++AG+D+ LY PSG Y YQA AIG A +LE+ ++ + T ED I AL A+ TL+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK--EDLTIEDTILLALKALSATLK 204
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSMA_SULIL (Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=psmA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.347e-34 Identity = 83/197 (42.13%), Postives = 118/197 (59.90%), Query Frame = 3 Query: 72 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVN-KANSELSSHQ-KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 656 YD +T +SP G L+QV+YA EAVK+G AIG++SK+ VV+ KA S L +K+F +DDH+G + AGL +DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ RP+GV L++AG+D+ LY PSG Y YQA AIG A +LE+ ++ + T ED I AL A+ TL+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK--EDLTIEDTILLALKALSATLK 204
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSMA_SULIK (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=psmA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.347e-34 Identity = 83/197 (42.13%), Postives = 118/197 (59.90%), Query Frame = 3 Query: 72 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVN-KANSELSSHQ-KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 656 YD +T +SP G L+QV+YA EAVK+G AIG++SK+ VV+ KA S L +K+F +DDH+G + AGL +DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ RP+GV L++AG+D+ LY PSG Y YQA AIG A +LE+ ++ + T ED I AL A+ TL+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK--EDLTIEDTILLALKALSATLK 204
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSMA_SULIA (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27) GN=psmA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.347e-34 Identity = 83/197 (42.13%), Postives = 118/197 (59.90%), Query Frame = 3 Query: 72 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVN-KANSELSSHQ-KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 656 YD +T +SP G L+QV+YA EAVK+G AIG++SK+ VV+ KA S L +K+F +DDH+G + AGL +DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ RP+GV L++AG+D+ LY PSG Y YQA AIG A +LE+ ++ + T ED I AL A+ TL+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK--EDLTIEDTILLALKALSATLK 204
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA5_ORYSJ (Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica GN=PAE1 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.001e-34 Identity = 83/211 (39.34%), Postives = 126/211 (59.72%), Query Frame = 3 Query: 63 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPV---GRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 680 R +YD V T+SP GRLFQVEYA+EA+K GS AIGL++K VVL + S L S +KI ++D+HIG A++GL AD R L + R E N+ ++Y P+ V + + LA + + S RP+GV LL+AG DE G LYY PSG +++ A AIGS S+ A + L+ ++ E T ++ AL +++ ++ + +++ Sbjct: 5 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN--KELTLQEAETIALSILKQVMEEKVTPNNV 213
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSMA_THESM (Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=psmA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.920e-34 Identity = 83/197 (42.13%), Postives = 121/197 (61.42%), Query Frame = 3 Query: 72 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 656 YD +T +SP GRLFQV+YA EAVK+G+ A+G++ K VVL + S+L + +KIF++DDHI A +G+ AD RVL R E Y TY P+P+ LV ++ D Q+ TQ RP+G LL+AG++EK L+ PSG YFE++A AIGS A E ++ + E T E+ IK A++A+ + ++ Sbjct: 10 YDRAITVFSPDGRLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLIEPESYEKIFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYGGVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRD--EMTLEEAIKLAVLALSKIME 203 The following BLAST results are available for this feature:
BLAST of FC931659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931659 ID=FC931659; Name=FC931659; organism=Citrus clementina; type=EST; length=682bpback to top |