FC931659
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1 PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 7.650e-30 Identity = 72/199 (36.18%), Postives = 116/199 (58.29%), Query Frame = 3 Query: 72 YDTDVTTWSPAGRLFQVEYAMEAVKQ-GSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNC-PSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 656 YD +T +SP GRLFQVEYA +AVK G +IG+R K V + K +L S +F + +IG+ G+TAD R L + R++ + +TY +PV L +ADK+QV TQ ++ RP GV +V G+DE+ L Y C P+G+++ ++A + G + Q A +LE++ + T ++ ++ A+ A++ LQ Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQSVLQ 207
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA5_CAEEL (Proteasome subunit alpha type-5 OS=Caenorhabditis elegans GN=pas-5 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.650e-30 Identity = 79/211 (37.44%), Postives = 127/211 (60.19%), Query Frame = 3 Query: 63 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA----QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSS 677 R++YD V T+SP GRLFQVEYA+EAVK GS +IG+++ V+L ++ S+L + +KI KVD HIGV AGL AD R L + E N+ +TY + V + +A+ A + S RP+GV +L AG+D++GA L++ PSG + + +A +IG+ S A+ L+ ++ + T ++ +K AL +++ ++ E L S+ Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDVKASMSRPFGVAMLFAGVDQEGAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHD--ALTIKEGLKMALAILKQVME-EKLNSA 212
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSJ (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.650e-30 Identity = 75/207 (36.23%), Postives = 119/207 (57.49%), Query Frame = 3 Query: 66 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 680 +QY +TT+SP+G+L Q+E+A+ AV G ++G+++ VV+ K S L + +KI + +IGV +G+ D RVL R R + Y Y+ +PV +LV + A Q TQ RP+GV LL+AG D+ G LY PSG+YF ++A A+G AKT+LE+R+ E +D I A++ ++E +G+ ++I Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDME--LDDAIHTAILTLKEGYEGQISANNI 208
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSI (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica GN=PAB1 PE=2 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 7.650e-30 Identity = 75/207 (36.23%), Postives = 119/207 (57.49%), Query Frame = 3 Query: 66 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 680 +QY +TT+SP+G+L Q+E+A+ AV G ++G+++ VV+ K S L + +KI + +IGV +G+ D RVL R R + Y Y+ +PV +LV + A Q TQ RP+GV LL+AG D+ G LY PSG+YF ++A A+G AKT+LE+R+ E +D I A++ ++E +G+ ++I Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDME--LDDAIHTAILTLKEGYEGQISANNI 208
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.992e-30 Identity = 81/206 (39.32%), Postives = 112/206 (54.37%), Query Frame = 3 Query: 72 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELS--SHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-ENFSESTREDLIKDALMAIRETLQGETLKSSI 680 YD +T +SP GRL+QVEYA EAV++G+ A+G++ VVL + S+L S +KIF++DDHI A +GL AD RVL R E +Y + V L ++ D Q TQ RP+G+ LL+ G+D A L+ PSG EY+A AIGS A LE ++ EN S +L AL E L+ E + +I Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMIVSEGMELALYALSKTTEELKPENIDMAI 215
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSMA_METM5 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=psmA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.992e-30 Identity = 80/206 (38.83%), Postives = 114/206 (55.34%), Query Frame = 3 Query: 72 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELS--SHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-ENFSESTREDLIKDALMAIRETLQGETLKSSI 680 YD +T +SP GRL+QVEYA EAV++G+ A+G++ K VVL + S+L S +KIF++DDHI A +GL AD RVL R E +Y + V L ++ D Q TQ RP+G+ LL+ G+D A L+ PSG EY+A AIGS A LE ++ E+ + + +L AL E L+ E + +I Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSEDMTVNEGMELALYALSKTTEELKPENIDMAI 215
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA7A_ARATH (Proteasome subunit alpha type-7-A OS=Arabidopsis thaliana GN=PAD1 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.305e-29 Identity = 76/200 (38.00%), Postives = 115/200 (57.50%), Query Frame = 3 Query: 69 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLD--EKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 656 +YD +T +SP G LFQVEYA+EAV++G+AA+G+R VVL K+ +L S +KI +D+HI +A AGL AD RVL R EC ++ T E P+ V + +A Q TQ RP+G+ L+ G D + LY PSG + ++A A G S + + +LE+ N+ ES ++ +K A+ A+ E ++ Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEK---NYKESAGQETVKLAIRALLEVVE 199
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA6_TOBAC (Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.305e-29 Identity = 74/207 (35.75%), Postives = 120/207 (57.97%), Query Frame = 3 Query: 72 YDTDVTTWSPAGRLFQVEYAMEAVKQ-GSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLD-EKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 680 YD +T +SP GRLFQVEYA +AVK G +IG+R K V + K +L + +F + ++G+ G+TAD R L + R+E + + Y +PV L +ADK+QV TQ ++ RP GV ++ G+D EKG L+ P+G++F ++A + GS+ Q A +LE++ +N + E+ ++ A+ A++ LQ + S I Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIADKSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLEKKMKNDPAFSYEETVQTAISALQSVLQEDFKASEI 215
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA5_YEAST (Proteasome component PUP2 OS=Saccharomyces cerevisiae GN=PUP2 PE=1 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.305e-29 Identity = 75/179 (41.90%), Postives = 109/179 (60.89%), Query Frame = 3 Query: 63 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA------QVCTQRSWKRPYGVGLLVAGLD-EKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYL 572 R++YD V+T+SP GRLFQVEY++EA+K GS AIG+ +K VVLG +A S L S +KI ++D HIG A++GLTAD R + + R+ + ++ Y+ + V L + D A +R RP+GV LL+AG D + G L++ PSG ++ Y A AIGS S+ A+ L Sbjct: 5 RSEYDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAEL 183
BLAST of FC931659 vs. ExPASy Swiss-Prot
Match: PSA2_DROME (Proteasome subunit alpha type-2 OS=Drosophila melanogaster GN=Pros25 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.305e-29 Identity = 71/210 (33.81%), Postives = 118/210 (56.19%), Query Frame = 3 Query: 57 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 680 M +Y +TT+SP+G+L Q+EYA+ AV G+ ++G+ + VV+ NK S L ++ + +HIG+ +G+ D R+L + R Y TY+ P+PV +LV ++A Q TQ RP+GV LL+ G D +LY + PSG YF ++A A+G + KT+LE+R+ E +D + A++ ++E +G+ +I Sbjct: 1 MATERYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIYNHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLLICGWDNDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLE--LDDAVHTAILTLKEGFEGKMTADNI 208 The following BLAST results are available for this feature:
BLAST of FC931659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931659 ID=FC931659; Name=FC931659; organism=Citrus clementina; type=EST; length=682bpback to top |