FC931660

Overview
NameFC931660
Unique NameFC931660
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E133_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 3 (Fragment) OS=Solanum tuberosum GN=GLUB3 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 6.718e-60
Identity = 119/220 (54.09%), Postives = 152/220 (69.09%), Query Frame = 2
Query:    2 NQATLQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAASVDN 661
            N   L ALRGSNIE++LG+PN D+                  +D+   VK +YIAVGNE+SP+ G T+    F +PA+ NI  AI  AGLGN IKVST++D  ++G++ PPS+G+FR DVR F DP++ FL D +APLLVN+YPY SY GN   I L +ALFT+  V VQDG   YRNLFDA+LD+VYAA+E+ GGGS+ IVVSESGWP+AG   A+ DN
Sbjct:   27 NHGALNALRGSNIEVILGLPNVDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTG-TSSLTSFQVPALVNIYKAIGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALFTAPNVVVQDGSRQYRNLFDAMLDSVYAAMERTGGGSVGIVVSESGWPSAGAFGATQDN 245          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E13E_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GGIB50 OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 8.774e-60
Identity = 119/220 (54.09%), Postives = 153/220 (69.55%), Query Frame = 2
Query:    2 NQATLQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAASVDN 661
            N   LQAL+GSNIE++LG+PNSD+                  +D+   VK +YIAVGNE+SP+ G T+    FL PAM NI  AI  AGLGN IKVST++D  ++G++ PPS+G+FR D R F+D ++ FL D +APLLVN+YPY SY GN   I L ++LFT+  V VQDG   YRNLFDA+LD+VYAALE++GG S+ IVVSESGWP+AG   A+ DN
Sbjct:   70 NHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTG-TSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSFRNDARWFVDAIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSRQYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAGAFGATYDN 288          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E132_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 2 OS=Solanum tuberosum GN=GLUB2 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 8.774e-60
Identity = 118/220 (53.64%), Postives = 152/220 (69.09%), Query Frame = 2
Query:    2 NQATLQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAASVDN 661
            NQ  L ALRGSNIE++LG+PN D+                  +D+   VK +YIAVGNE+SP+ G T+    F +PA+ NI  A+  AGLGN IKVST++D  ++G++ PPS+G+FR DVR F DP++ FL D +APLLVN+YPY SY GN   I L +ALFT+  V VQDG   YRNLFDA+LD+VYAA+E+ GGGS+ IVVSE GWP+AG   A+ DN
Sbjct:   62 NQGALNALRGSNIEVILGLPNVDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTG-TSSLTSFQVPALVNIYKAVGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALFTAPNVVVQDGSRQYRNLFDAMLDSVYAAMERTGGGSVGIVVSECGWPSAGAFGATQDN 280          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E13B_PHAVU (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.146e-59
Identity = 119/220 (54.09%), Postives = 156/220 (70.91%), Query Frame = 2
Query:    2 NQATLQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAASVDN 661
            NQA LQALR S IEL+LGVPNSDL                   ++   VK +YIAVGNEVSP+ G ++ Y  ++LPA+QN+  A+ A GL +QIKVSTAID  ++G++ PPS+G+FR DVR +LDP+I +L+   APL VN+YPY SY GN RDI L +ALFTS  V V+DGQ+GY+NLFDA+LD+V+AA++    G + +VVSESGWP+ GG  A+ DN
Sbjct:   37 NQAALQALRNSGIELILGVPNSDLQGLATNADTARQWVQRNVLNFWPSVKIKYIAVGNEVSPVGG-SSWYAQYVLPAVQNVYQAVRAQGLHDQIKVSTAIDMTLIGNSYPPSQGSFRGDVRSYLDPIIGYLLYASAPLHVNVYPYFSYSGNPRDISLPYALFTSPNVVVRDGQYGYQNLFDAMLDSVHAAIDNTRIGYVEVVVSESGWPSDGGFGATYDN 255          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E131_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 1 (Fragment) OS=Solanum tuberosum GN=GLUB1 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.553e-59
Identity = 117/220 (53.18%), Postives = 151/220 (68.64%), Query Frame = 2
Query:    2 NQATLQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAASVDN 661
            N   L ALRGSNIE++LG+PN D+                  +D+   VK +YIAVGNE+SP+ G T+    F +PA+ NI  A+  AGLGN IKVST++D  ++G++ PPS+G+FR DVR F DP++ FL D +APLLVN+YPY SY GN   I L +ALFT+    VQDG   YRNLFDA+LD+VYAA+E+ GGGS+ IVVSESGWP+AG   A+ DN
Sbjct:   36 NHGALNALRGSNIEVILGLPNVDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTG-TSSLTSFQVPALVNIYKAVGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALFTAPNAVVQDGSRQYRNLFDAMLDSVYAAMERTGGGSVGIVVSESGWPSAGAFGATQDN 254          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E13B_PEA (Glucan endo-1,3-beta-glucosidase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.334e-59
Identity = 124/222 (55.86%), Postives = 153/222 (68.92%), Query Frame = 2
Query:    2 NQATLQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGET--TQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAASVDN 661
            NQ  L ALR S IEL+LG+PNSDL                   ++   VK +YIAVGNEVSP+ G +   QYV   LPA QN+  AI A GL +QIKV+TAID  ++G++ PPSKG+FR DVR +LDP I +LV   APLLVN+YPY S+IGN RDI L +ALFTS  V VQDG  GY+NLFDA+LD+V+AAL+  G G + +VVSESGWP+ GG+A S DN
Sbjct:   69 NQPALNALRDSGIELILGIPNSDLQTLATNQDSARQWVQRNVLNFYPSVKIKYIAVGNEVSPVGGSSWLAQYV---LPATQNVYQAIRAQGLHDQIKVTTAIDMTLIGNSFPPSKGSFRSDVRSYLDPFIGYLVYAGAPLLVNVYPYFSHIGNPRDISLPYALFTSPGVMVQDGPNGYQNLFDAMLDSVHAALDNTGIGWVNVVVSESGWPSDGGSATSYDN 287          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E13A_ARATH (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Arabidopsis thaliana GN=BG2 PE=1 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 3.450e-56
Identity = 119/216 (55.09%), Postives = 144/216 (66.67%), Query Frame = 2
Query:   14 LQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAASVDN 661
            L ALRGS+IEL+L VP+SDL                  + Y +GV+FRYI VGNEV P  G       FLL AMQNI NA+  AGL  ++KVSTAI T    D SPPS+G FR + + FL+PVI FL   Q+PLLVNLYPY SY+G+T +I LD+ALFT+      D  + Y+NLFDA LD+VYAALEK+GGGSL IVVSE+GWPT G    SV+N
Sbjct:   71 LAALRGSDIELILDVPSSDLERLASSQTEADKWVQENVQSYRDGVRFRYINVGNEVKPSVGG------FLLQAMQNIENAVSGAGL--EVKVSTAIATDTTTDTSPPSQGRFRDEYKSFLEPVIGFLASKQSPLLVNLYPYFSYMGDTANIHLDYALFTAQSTVDNDPGYSYQNLFDANLDSVYAALEKSGGGSLEIVVSETGWPTEGAVGTSVEN 278          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E13G_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 OS=Nicotiana tabacum GN=PR2 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.695e-50
Identity = 104/214 (48.60%), Postives = 140/214 (65.42%), Query Frame = 2
Query:   20 ALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAASVDN 661
            ALRGSNIE++L VP  DL                    + + VKF+YIAVGNEVSP  G   QY PF+ PAMQN+ NA+ AAGL +QIKVSTA  + +L +  PP    FR +   F++P+I+FLV +  PLL N+YPY  +I NT D+ L +ALFT      +    GY+NLFDA+LD++Y A+EKAGG ++ I+VSESGWP+ G +AA+++N
Sbjct:   73 ALRGSNIEIILDVPLQDLQSLTDPSRANGWVQDNIINHFPD-VKFKYIAVGNEVSP--GNNGQYAPFVAPAMQNVYNALAAAGLQDQIKVSTATYSGILANTYPPKDSIFRGEFNSFINPIIQFLVQHNLPLLANVYPYFGHIFNTADVPLSYALFTQQ----EANPAGYQNLFDALLDSMYFAVEKAGGQNVEIIVSESGWPSEGNSAATIEN 279          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E13I_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-N (Fragment) OS=Nicotiana tabacum GN=PRN PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.075e-49
Identity = 103/214 (48.13%), Postives = 140/214 (65.42%), Query Frame = 2
Query:   20 ALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAASVDN 661
            ALRGSNIE++L VP  DL                    + + VKF+YIAVGN+VSP  G   QY PF+ PAMQN+ NA+ AAGL +QIKVSTA  + +L +  PP    FR +   F++P+I+FLV +  PLL N+YPY  +I NT D+ L +ALFT      +    GY+NLFDA+LD++Y A+EKAGG ++ I+VSESGWP+ G +AA+++N
Sbjct:    5 ALRGSNIEIILDVPLQDLQSLTDPSRANGWVQDNIINHFPD-VKFKYIAVGNKVSP--GNNGQYAPFVAPAMQNVYNALAAAGLQDQIKVSTATYSGILANTYPPKDSIFRGEFNSFINPIIQFLVQHNLPLLANVYPYFGHIFNTADVPLSYALFTQQ----EANPAGYQNLFDALLDSMYFAVEKAGGQNVEIIVSESGWPSEGNSAATIEN 211          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E13K_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GL161 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.335e-49
Identity = 101/215 (46.98%), Postives = 140/215 (65.12%), Query Frame = 2
Query:   17 QALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAASVDN 661
            +AL GSNIE++LGVPN DL                  R +   VKF+YI++GN+VSP N +  QY  FLL AM+N+ NA+ AAGL + IKVST   + VL +  PP +  FR + + F++P+I+FL  N  PLL N+YPY  ++ NT D+ L +ALFT           GY+NLFDAILD++Y A+EKAGG ++ I+VSESGWP+ G +AA+++N
Sbjct:   52 KALNGSNIEIILGVPNQDLEALANSSIANGWVQDNI-RSHFPYVKFKYISIGNKVSPTNND--QYSEFLLQAMKNVYNALAAAGLQDMIKVSTVTYSGVLANTYPPERSIFREEFKSFINPIIQFLARNNLPLLANVYPYFVHVSNTADVSLSYALFTQQ----GTNSAGYQNLFDAILDSMYFAVEKAGGPNVEIIVSESGWPSEGSSAATIEN 259          
The following BLAST results are available for this feature:
BLAST of FC931660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
E133_SOLTU6.718e-6054.09Glucan endo-1,3-beta-glucosidase, basic isoform 3 ... [more]
E13E_TOBAC8.774e-6054.09Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E132_SOLTU8.774e-6053.64Glucan endo-1,3-beta-glucosidase, basic isoform 2 ... [more]
E13B_PHAVU1.146e-5954.09Glucan endo-1,3-beta-glucosidase, basic isoform OS... [more]
E131_SOLTU2.553e-5953.18Glucan endo-1,3-beta-glucosidase, basic isoform 1 ... [more]
E13B_PEA3.334e-5955.86Glucan endo-1,3-beta-glucosidase OS=Pisum sativum ... [more]
E13A_ARATH3.450e-5655.09Glucan endo-1,3-beta-glucosidase, acidic isoform O... [more]
E13G_TOBAC3.695e-5048.60Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13I_TOBAC1.075e-4948.13Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E13K_TOBAC5.335e-4946.98Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]

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Properties
Property NameValue
Genbank descriptionC34107F03EF PostHarvP1 Citrus clementina cDNA clone C34107F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931660 ID=FC931660; Name=FC931660; organism=Citrus clementina; type=EST; length=662bp
GAATCAAGCAACTCTCCAAGCCCTTAGAGGCTCAAACATCGAGCTCCTCC
TCGGTGTGCCCAACTCTGACCTTCAAAACGTCGCCGCAAGCCAGGCCAAC
GCTAACTCATGGGTCCAGAACAACGTCAGAGACTACGCCAACGGCGTCAA
GTTTCGCTACATCGCCGTGGGAAACGAAGTCAGCCCCTTGAATGGCGAAA
CAACCCAGTACGTGCCTTTCCTCCTCCCCGCCATGCAAAATATTCGCAAC
GCGATCTTAGCAGCCGGCCTTGGGAACCAAATCAAAGTTTCCACGGCAAT
CGACACCCGGGTTCTTGGAGACGCGTCCCCTCCTTCGAAGGGCACTTTCA
GGCCCGACGTCCGAAGATTTCTTGATCCTGTTATTAGGTTCTTAGTTGAC
AACCAGGCTCCTTTGTTAGTTAATTTGTATCCGTATATTAGTTATATTGG
CAACACTAGGGACATTCGTCTTGATTTTGCACTCTTTACTTCTGATGTTG
TGAGAGTGCAAGATGGGCAGTTTGGTTACAGGAATCTTTTTGATGCGATT
TTGGATGCTGTATACGCGGCGTTAGAGAAGGCCGGAGGGGGTTCCTTGAG
GATTGTGGTGTCGGAGAGCGGTTGGCCGACGGCGGGAGGGACGGCGGCGA
GCGTTGATAATG
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