FC931660

Overview
NameFC931660
Unique NameFC931660
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E138_ARATH (Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana GN=At1g64760 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 2.330e-28
Identity = 72/221 (32.58%), Postives = 114/221 (51.58%), Query Frame = 2
Query:    2 NQATLQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXR-DYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASP---PSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAAS 652
            ++ T+ AL GS +E+++ +PN  L                  R ++  GV   ++AVGNE   L      ++    PA+ NI+NA+  AGLGN +K +  ++  V    +    PS G FRPD+   +  ++ FL  N AP+ +N+YP++S  GN  D  L++A F      + D    Y N+FDA  D + ++L+  G G + I+V E GWPT G   A+
Sbjct:   60 DETTMGALAGSGLEVMVAIPNDQLKVMTSYDRAKDWVRKNVTRYNFDGGVNITFVAVGNEPF-LKSYNGSFINLTFPALANIQNALNEAGLGNSVKATVPLNADVYDSPASNPVPSAGRFRPDIIGQMTQIVDFLGKNNAPITINIYPFLSLYGND-DFPLNYAFF-DGAEPINDNGIDYTNVFDANFDTLVSSLKAVGHGDMPIIVGEVGWPTEGDKHAN 277          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E139_ARATH (Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis thaliana GN=At5g58480 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.279e-26
Identity = 77/218 (35.32%), Postives = 116/218 (53.21%), Query Frame = 2
Query:   14 LQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANG---VKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKV--STAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAAS 652
            L+AL GSNI + +G+ NS L                    Y NG   V+  Y+AVG E   L     QY PF++ A  NI+NA++ A L N++KV   ++ D+  L ++  PS G FR D+ + +  ++ FL  + +P  V + P++S+  N ++I LDF+LF       +DG+  YRN FD   D + +AL   G   + IVVS+ GWPT G   A+
Sbjct:   65 LRALSGSNIGVTIGIQNSMLKSLNASVKVAESWVHDNVTRYFNGGNRVRIEYVAVGEEPF-LQSYGNQYKPFVIGAAMNIQNALVKANLANEVKVVVPSSFDS-FLSESGRPSSGHFRADLNKTMIELLSFLTKHHSPFFVTISPFLSFHQN-KNISLDFSLFKETAKAHKDGRKTYRNSFDLSYDTLVSALFTIGFSEVDIVVSKIGWPTDGAENAT 279          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E13J_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-O (Fragment) OS=Nicotiana tabacum GN=PR0 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.323e-23
Identity = 50/98 (51.02%), Postives = 72/98 (73.47%), Query Frame = 2
Query:  368 FLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTAASVDN 661
            F++P+I+FL  N  PLL N+YPY  +I NT D+ L +ALFT      +    GY+NLFDA+LD++Y A+EKAGG ++ I+VSESGWP+ G +AA+++N
Sbjct:    3 FINPIIQFLARNNLPLLANVYPYFGHIYNTADVPLSYALFTQQ----EANPAGYQNLFDALLDSMYFAVEKAGGPNVEIIVSESGWPSEGNSAATIEN 96          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.257e-23
Identity = 71/227 (31.28%), Postives = 114/227 (50.22%), Query Frame = 2
Query:    2 NQATLQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQ----DGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTA---ASVDN 661
            +++ L A   + +++++ VPN  L                    Y        IAVG+EV       T     L+ A++ I+ A++ A L  QIKVST   + ++ D+ PPS+  F       + P+++FL    +PLL+N+YPY  Y+ +   I LD+ALF       +    +    Y N+FDAI+DA Y A+      ++ IVV+ESGWP+ GG +   A+V+N
Sbjct:   58 DRSMLLAFAHTGVQVIISVPNDQLLGISQSNATAANWVTRNVAAYYPATNITTIAVGSEVLT---SLTNAASVLVSALKYIQAALVTANLDRQIKVSTPHSSTIILDSFPPSQAFFNKTWDPVIVPLLKFLQSTGSPLLLNVYPYFDYVQSNGVIPLDYALFQPLQANKEAVDANTLLHYTNVFDAIVDAAYFAMSYLNFTNIPIVVTESGWPSKGGPSEHDATVEN 281          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.257e-23
Identity = 78/222 (35.14%), Postives = 108/222 (48.65%), Query Frame = 2
Query:   14 LQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDG-QFGYRNLFDAILDAVYAALEKAGGG--SLRIVVSESGWPTAGG---TAASVDN 661
            L+A  GS  EL + + N  L                  + Y    K   I VGNEV  L    +     L PAMQ+I  A++  GL  QI V+TA    +L  + PPS  +FR D+   L P++ F V   +P+L+N YP+ +Y  N + + LDF LF  +      G  F Y N+  A +DAVY AL+  G     + IVVSE+GWP+ G      A+ DN
Sbjct:   66 LRAFAGSGFELTVALGNEYLAQMSDPIKAQGWVKENV-QAYLPNTKIVAIVVGNEV--LTSNQSALTAALFPAMQSIHGALVDCGLNKQIFVTTAHSLAILDVSYPPSATSFRRDLLGSLTPILDFHVKTGSPILINAYPFFAYEENPKHVSLDFVLFQPNQGFTDPGSNFHYDNMLFAQVDAVYHALDAVGISYKKVPIVVSETGWPSNGDPQEVGATCDN 284          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.618e-21
Identity = 67/227 (29.52%), Postives = 111/227 (48.90%), Query Frame = 2
Query:    2 NQATLQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALF--TSDVVRVQDGQ--FGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGT---AASVDN 661
            N   L+A   ++IE+++GV N ++                    Y        IAVG+EV           P L  A+ NI  A++A+ L  ++KVS+ +   ++    PPS  TF P     +  +++FL +  +  ++N YPY  Y        LD+ALF   S V ++ D      Y ++FDA++DA Y ++E      + +VV+E+GWP++GG+   AA+V N
Sbjct:   61 NSHMLKAFANTSIEVMVGVTNEEILKIGRFPSAAAAWVNKNVAAYIPSTNITAIAVGSEVLTT---IPHVAPILASALNNIHKALVASNLNFKVKVSSPMSMDIMPKPFPPSTSTFSPSWNTTVYQLLQFLKNTGSFFMLNAYPYYGYTTANGIFPLDYALFKQLSPVKQIVDPNTLLHYNSMFDAMVDAAYYSMEALNFSKIPVVVTETGWPSSGGSDEAAATVAN 284          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.113e-21
Identity = 68/224 (30.36%), Postives = 112/224 (50.00%), Query Frame = 2
Query:   14 LQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALF-----TSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGT---AASVDN 661
            L AL  + I++++ +PN  L                    +        ++VG+EV       +   P L+ A++N+  A+L+A L   IKVST + T ++ D  PPS+  F   +   + P++ FL    + L+VN+YPYI Y+ +   I LD+ALF       + V   +    Y N FDA++DA Y A+      ++ ++V+ESGWP+ G T    A++DN
Sbjct:   71 LIALANTGIKVIISIPNDQLLGIGQSNSTAANWVKRNVIAHYPATMITAVSVGSEVLT---SLSNAAPVLVSAIKNVHAALLSANLDKLIKVSTPLSTSLILDPFPPSQAFFNRSLNAVIVPLLSFLQSTNSYLMVNVYPYIDYMQSNGVIPLDYALFKPIPPNKEAVDA-NTLVRYSNAFDAMVDATYFAMAFLNFTNIPVLVTESGWPSKGETNEPDATLDN 290          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 6.147e-21
Identity = 57/177 (32.20%), Postives = 95/177 (53.67%), Query Frame = 2
Query:  152 FRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALF----TSDVVRVQDGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAGGTA---ASVDN 661
            F  + +    S L+       P LLPA++++ NA++A+ L  QIKVST     ++ D  PPS+  F       + P+++FL    +PL++NLYPY  Y+ N   + LD  LF     S  +   +    Y N+ DA++DA Y +++      + ++V+ESGWP+ G +    A++DN
Sbjct:   17 FTLLLISANSSSLSHNVPSSAPLLLPAIESLYNALVASNLHTQIKVSTPHAASIMLDTFPPSQAYFNQTWHSIMVPLLQFLSKTGSPLMMNLYPYYVYMQNKGVVPLDNCLFEPLTPSKEMVDPNTLLHYTNVLDAMVDAAYVSMKNLNVSDVAVLVTESGWPSKGDSKEPYATIDN 193          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: E1314_ARATH (Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500/F10A12.18 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.048e-20
Identity = 55/209 (26.32%), Postives = 106/209 (50.72%), Query Frame = 2
Query:   14 LQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRRFLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQ-DGQFGYRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAG 637
            L +   S ++ ++G+ N  L                    + +  +   I VGNE+   N      +  LLPAM+++  A+   GL  Q+ V++A    +L  + PPS G+F+ +  ++L P++ F    ++P L+N YP+ +Y  + +++ L++ LF  +   V  +    Y N+  A +DA+Y+A++  G   + + +SE+GWP+ G
Sbjct:   68 LFSFSNSQVDFMIGLGNEYLQNMSTDPTKAQDWLQQRLEPHISKTRITSIVVGNEIFKTNDHVL--IQSLLPAMKSVYAALTNLGLEKQVTVTSAHSLDILSTSYPPSSGSFKEEFIQYLQPLLDFHSQIESPFLINAYPFFAYKDSPKEVPLEYVLFQPNQGMVDPNTNLHYDNMLFAQVDALYSAIKTLGHTDIEVRISETGWPSKG 274          
BLAST of FC931660 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.051e-20
Identity = 67/212 (31.60%), Postives = 103/212 (48.58%), Query Frame = 2
Query:   11 TLQALRGSNIELLLGVPNSDLXXXXXXXXXXXXXXXXXXRDYANGVKFRYIAVGNEVSPLNGETTQYVPFLLPAMQNIRNAILAAGLGNQIKVSTAIDTRVLGDASPPSKGTFRPDVRR-FLDPVIRFLVDNQAPLLVNLYPYISYIGNTRDIRLDFALFTSDVVRVQDGQFG--YRNLFDAILDAVYAALEKAGGGSLRIVVSESGWPTAG 637
            +L  L  +N+ + + VPN  +                    Y    + R++ VGNE+   N         L+PAM+ I N++   G+ N IKV T +    L  + PPS GTFR ++    + P+++FL    +   +N++PY  +  N  +  LDFALF        D Q G  YRNL D +LD+V  A+ K G   +R+ +SE+GWP  G
Sbjct:   80 SLTLLSQTNLYVTITVPNHQITALSSNQTIADEWVRTNILPYYPQTQIRFVLVGNEILSYNSGNVSVN--LVPAMRKIVNSLRLHGIHN-IKVGTPLAMDSLRSSFPPSNGTFREEITGPVMLPLLKFLNGTNSYFFLNVHPYFRWSRNPMNTSLDFALFQGHSTYT-DPQTGLVYRNLLDQMLDSVLFAMTKLGYPHMRLAISETGWPNFG 287          
The following BLAST results are available for this feature:
BLAST of FC931660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
E138_ARATH2.330e-2832.58Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis ... [more]
E139_ARATH1.279e-2635.32Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis ... [more]
E13J_TOBAC1.323e-2351.02Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E133_ARATH2.257e-2331.28Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E1310_ARATH2.257e-2335.14Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis... [more]
E134_ARATH1.618e-2129.52Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
E132_ARATH2.113e-2130.36Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
E131_ARATH6.147e-2132.20Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]
E1314_ARATH1.048e-2026.32Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis... [more]
EA6_ARATH3.051e-2031.60Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionC34107F03EF PostHarvP1 Citrus clementina cDNA clone C34107F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931660 ID=FC931660; Name=FC931660; organism=Citrus clementina; type=EST; length=662bp
GAATCAAGCAACTCTCCAAGCCCTTAGAGGCTCAAACATCGAGCTCCTCC
TCGGTGTGCCCAACTCTGACCTTCAAAACGTCGCCGCAAGCCAGGCCAAC
GCTAACTCATGGGTCCAGAACAACGTCAGAGACTACGCCAACGGCGTCAA
GTTTCGCTACATCGCCGTGGGAAACGAAGTCAGCCCCTTGAATGGCGAAA
CAACCCAGTACGTGCCTTTCCTCCTCCCCGCCATGCAAAATATTCGCAAC
GCGATCTTAGCAGCCGGCCTTGGGAACCAAATCAAAGTTTCCACGGCAAT
CGACACCCGGGTTCTTGGAGACGCGTCCCCTCCTTCGAAGGGCACTTTCA
GGCCCGACGTCCGAAGATTTCTTGATCCTGTTATTAGGTTCTTAGTTGAC
AACCAGGCTCCTTTGTTAGTTAATTTGTATCCGTATATTAGTTATATTGG
CAACACTAGGGACATTCGTCTTGATTTTGCACTCTTTACTTCTGATGTTG
TGAGAGTGCAAGATGGGCAGTTTGGTTACAGGAATCTTTTTGATGCGATT
TTGGATGCTGTATACGCGGCGTTAGAGAAGGCCGGAGGGGGTTCCTTGAG
GATTGTGGTGTCGGAGAGCGGTTGGCCGACGGCGGGAGGGACGGCGGCGA
GCGTTGATAATG
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