FC931663

Overview
NameFC931663
Unique NameFC931663
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: CYSN_ECODH (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli (strain K12 / DH10B) GN=cysN PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.030e-13
Identity = 49/159 (30.82%), Postives = 82/159 (51.57%), Query Frame = 1
Query:    4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYK-----IGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNV 465
            LG+K ++   NKMD     YS+  +  I ++  ++  ++  N + + FVP+S  EGDN+  +S ++ WY GPTLL+ L+ +   +    +P+R P+Q V +      G  GT+  GRVE      G  V   PSG+ + V  +       +EA  G+ +
Sbjct:  158 LGIKHLVVAINKMDLVD--YSEETFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEV-----GQRVKVLPSGVESNVARIVTFDGDREEAFAGEAI 308          
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: CYSN_ECOBW (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli (strain K12 / BW2952) GN=cysN PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.030e-13
Identity = 49/159 (30.82%), Postives = 82/159 (51.57%), Query Frame = 1
Query:    4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYK-----IGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNV 465
            LG+K ++   NKMD     YS+  +  I ++  ++  ++  N + + FVP+S  EGDN+  +S ++ WY GPTLL+ L+ +   +    +P+R P+Q V +      G  GT+  GRVE      G  V   PSG+ + V  +       +EA  G+ +
Sbjct:  158 LGIKHLVVAINKMDLVD--YSEETFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEV-----GQRVKVLPSGVESNVARIVTFDGDREEAFAGEAI 308          
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: CYSN_ECO81 (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O81 (strain ED1a) GN=cysN PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.030e-13
Identity = 49/159 (30.82%), Postives = 82/159 (51.57%), Query Frame = 1
Query:    4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYK-----IGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNV 465
            LG+K ++   NKMD     YS+  +  I ++  ++  ++  N + + FVP+S  EGDN+  +S ++ WY GPTLL+ L+ +   +    +P+R P+Q V +      G  GT+  GRVE      G  V   PSG+ + V  +       +EA  G+ +
Sbjct:  158 LGIKHLVVAINKMDLVD--YSEETFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEV-----GQRVKVLPSGVESNVARIVTFDGDREEAFAGEAI 308          
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: CYSN_ECO7I (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=cysN PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.030e-13
Identity = 49/159 (30.82%), Postives = 82/159 (51.57%), Query Frame = 1
Query:    4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYK-----IGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNV 465
            LG+K ++   NKMD     YS+  +  I ++  ++  ++  N + + FVP+S  EGDN+  +S ++ WY GPTLL+ L+ +   +    +P+R P+Q V +      G  GT+  GRVE      G  V   PSG+ + V  +       +EA  G+ +
Sbjct:  158 LGIKHLVVAINKMDLVD--YSEETFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEV-----GQRVKVLPSGVESNVARIVTFDGDREEAFAGEAI 308          
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: CYSN_ECO5E (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=cysN PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.030e-13
Identity = 49/159 (30.82%), Postives = 82/159 (51.57%), Query Frame = 1
Query:    4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYK-----IGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNV 465
            LG+K ++   NKMD     YS+  +  I ++  ++  ++  N + + FVP+S  EGDN+  +S ++ WY GPTLL+ L+ +   +    +P+R P+Q V +      G  GT+  GRVE      G  V   PSG+ + V  +       +EA  G+ +
Sbjct:  158 LGIKHLVVAINKMDLVD--YSEETFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEV-----GQRVKVLPSGVESNVARIVTFDGDREEAFAGEAI 308          
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: CYSN_ECO57 (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O157:H7 GN=cysN PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.030e-13
Identity = 49/159 (30.82%), Postives = 82/159 (51.57%), Query Frame = 1
Query:    4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYK-----IGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNV 465
            LG+K ++   NKMD     YS+  +  I ++  ++  ++  N + + FVP+S  EGDN+  +S ++ WY GPTLL+ L+ +   +    +P+R P+Q V +      G  GT+  GRVE      G  V   PSG+ + V  +       +EA  G+ +
Sbjct:  158 LGIKHLVVAINKMDLVD--YSEETFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEV-----GQRVKVLPSGVESNVARIVTFDGDREEAFAGEAI 308          
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: CYSN_ECO45 (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=cysN PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.030e-13
Identity = 49/159 (30.82%), Postives = 82/159 (51.57%), Query Frame = 1
Query:    4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYK-----IGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNV 465
            LG+K ++   NKMD     YS+  +  I ++  ++  ++  N + + FVP+S  EGDN+  +S ++ WY GPTLL+ L+ +   +    +P+R P+Q V +      G  GT+  GRVE      G  V   PSG+ + V  +       +EA  G+ +
Sbjct:  158 LGIKHLVVAINKMDLVD--YSEETFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEV-----GQRVKVLPSGVESNVARIVTFDGDREEAFAGEAI 308          
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_STRCJ (Elongation factor Tu OS=Streptomyces cinnamoneus GN=tuf PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13
Identity = 54/175 (30.86%), Postives = 83/175 (47.43%), Query Frame = 1
Query:    7 GVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---VVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG 510
            GV  ++   NK D    +      +  V+E+ S  +  G N   V    +   EGD         +W  G  LL  +    +NI +P+R  DKP  +P++DV+ I G GTV  GR+E GVLK      ++       TT V  +EM  + L E   G+NVG  ++ +  +D++RG
Sbjct:  129 GVPYIVVALNKADMVDDEEIMELVELEVRELLSEYEFDGDNCPVVQVSALKALEGDK--------EW--GEKLLGLMKAVDENIPQPERDVDKPFLMPIEDVFTITGRGTVVTGRIERGVLKVNETVDIIGIKTEKTTTTVTGIEMFRKLLDEGQAGENVGLLLRGIKREDVERG 293          
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_PROMM (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9313) GN=tuf PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13
Identity = 56/177 (31.64%), Postives = 90/177 (50.85%), Query Frame = 1
Query:    4 LGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEG-DNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 516
            +GV  ++   NK D    +       E+V+ E+   L    +  + +P V +SG +  +   E    +D      L++A+D +I EP+R  +KP  + ++DV+ I G GTV  GR+E G +K G    +V    S  TT V  VEM  + L E L GDN G  ++ +  +D++RG V
Sbjct:  126 VGVPALVVALNKCDMVDDE----EIIELVEMEIRELLSSYDFPGDDIPIVQVSGLKAIEGEAEWEAKID-----ELMEAVDASIPEPEREIEKPFLMAVEDVFSITGRGTVATGRIERGKVKKGEEIEIVGIRDSRKTT-VTGVEMFRKDLDEGLAGDNCGLLLRGIEKEDIERGMV 292          
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_OLTVI (Elongation factor Tu, chloroplastic OS=Oltmannsiellopsis viridis GN=tufA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13
Identity = 66/239 (27.62%), Postives = 117/239 (48.95%), Query Frame = 1
Query:    4 LGVKQMICCCNKMDATTPKYSKARYDEIVK----EVSSYLKKVGYNPEKVPFVPISGFEG-DNMIE----RSTNLDWYKGP-TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKID 681
            +GV +++   NK D           DE+++    EV   L    ++ + +P +P S     + +IE    +  + +W     +L++ +D+ I  P+R +DKP  + ++DV+ I G GTV  GRVE GV+K G  V       TTE  V  +EM  + L E++ GDNVG  ++ V  ++++RG V   +K         F +QV ++    + G  + P    +     V+ +++  KI+
Sbjct:  127 VGVPKIVVFLNKKDQVDD-------DELLELVELEVRETLDNYEFDGDDIPIIPGSALLALEALIESPEAKKGDNEWVDCIYSLMENVDSYIPTPERDTDKPFLMAVEDVFSITGRGTVATGRVERGVVKIGDTVELVGLKDTTETTVTGLEMFQKTLDESVAGDNVGILLRGVQKENIQRGMVL--AKPGSISPHTKFEAQVYVLTK--EEGGRHTPFFPGYRPQFYVRTTDVTGKIE 354          
The following BLAST results are available for this feature:
BLAST of FC931663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSN_ECODH1.030e-1330.82Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECOBW1.030e-1330.82Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECO811.030e-1330.82Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECO7I1.030e-1330.82Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECO5E1.030e-1330.82Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECO571.030e-1330.82Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECO451.030e-1330.82Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
EFTU_STRCJ1.346e-1330.86Elongation factor Tu OS=Streptomyces cinnamoneus G... [more]
EFTU_PROMM1.346e-1331.64Elongation factor Tu OS=Prochlorococcus marinus (s... [more]
EFTU_OLTVI1.346e-1327.62Elongation factor Tu, chloroplastic OS=Oltmannsiel... [more]

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Properties
Property NameValue
Genbank descriptionC34107F06EF PostHarvP1 Citrus clementina cDNA clone C34107F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931663 ID=FC931663; Name=FC931663; organism=Citrus clementina; type=EST; length=689bp
ACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGACGCCAC
CACCCCCAAGTACTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCT
CTTCCTACCTGAAGAAGGTTGGATACAACCCCGAGAAAGTCCCATTCGTG
CCCATCTCTGGTTTCGAGGGTGACAACATGATTGAGAGGTCTACCAACCT
TGACTGGTACAAGGGTCCAACCCTGCTGGACGCTCTTGACAATATCAATG
AGCCGAAGAGGCCCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGTG
TACAAGATTGGTGGCATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCGG
TGTCCTCAAGCCTGGTATGGTGGTGACATTTGGCCCCTCTGGATTGACAA
CTGAGGTTAAGTCTGTTGAGATGCACCACGAAGCTCTGCAGGAGGCCCTT
CCGGGTGACAATGTTGGTTTCAACGTGAAGAACGTTGCTGTCAAGGATCT
CAAGCGTGGTTTTGTTGCTTCCAACTCGAAGGATGATCCGGCCAGAGAAG
CTGCCAACTTCACCTCACAGGTCATCATCATGAACCACCCTGGCCAGATT
GGAAATGGATATGCCCCAGTGCTTGACTGCCACACCTCCCACATTGCCGT
CAAGTTTTCTGAGCTCGTGACGAAGATTGATAGGCGATC
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