FC931663
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_LEPBP (Elongation factor Tu OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=tuf PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13 Identity = 53/177 (29.94%), Postives = 87/177 (49.15%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 516 +GV ++ NK D + + +E+ L K + +K PF+ + EG++ ++L L++A+D + P R DKP +P++DV+ I G GTV GRVE GVLK + TT+ V +EM + L +A GDN+G ++ +D++RG V Sbjct: 128 VGVPYIVVYLNKADMLAADERDDMVEMVKEEIKDLLNKYNFPGDKTPFISGSALKALEGED-----SDLGMKSILKLMEAVDTYVPNPTRIVDKPFLMPVEDVFSITGRGTVATGRVEQGVLKINDEIEIVGIRDTTKSVVTGIEMFRKLLDQAEAGDNIGALLRGTKKEDIERGQV 299
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_LEPBA (Elongation factor Tu OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=tuf PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13 Identity = 53/177 (29.94%), Postives = 87/177 (49.15%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 516 +GV ++ NK D + + +E+ L K + +K PF+ + EG++ ++L L++A+D + P R DKP +P++DV+ I G GTV GRVE GVLK + TT+ V +EM + L +A GDN+G ++ +D++RG V Sbjct: 128 VGVPYIVVYLNKADMLAADERDDMVEMVKEEIKDLLNKYNFPGDKTPFISGSALKALEGED-----SDLGMKSILKLMEAVDTYVPNPTRIVDKPFLMPVEDVFSITGRGTVATGRVEQGVLKINDEIEIVGIRDTTKSVVTGIEMFRKLLDQAEAGDNIGALLRGTKKEDIERGQV 299
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_GRATL (Elongation factor Tu, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=tufA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13 Identity = 57/183 (31.15%), Postives = 91/183 (49.73%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEG------DNMIERSTNLDWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 516 +GV ++ NK D + + + EV L + + + +PFV S +N I+R N +W K +L+DA+D I P R +K + ++DV+ I G GTV GR+E G++K G + GL TT + +EM + L E + GDN+G ++ V KD++RG V Sbjct: 126 VGVPNVVVFLNKQDQVD---DEELLELVELEVRELLIQYDFPGDDIPFVAGSALLALEKVTENNSIQRGEN-EWVDKIHSLMDAVDEYIPTPVRDVEKTFLMAVEDVFSITGRGTVATGRIERGIIKVGDTIEI--VGLRETTTTTITGLEMFQKTLDEGMAGDNIGILLRGVQKKDIERGMV 302
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_ERYLH (Elongation factor Tu OS=Erythrobacter litoralis (strain HTCC2594) GN=tuf PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13 Identity = 59/200 (29.50%), Postives = 99/200 (49.50%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-MVVTFGPSGLT-TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN 585 +GV ++ NK+D + + + EV L + ++ + +P V ++ EG R N+ L+ A+D +I +P+RP D+ +P++DV+ I G GTV GRVETGV+ G V G T T V VEM + L GDN+G ++ V +D++RG V +K F+++V +++ Sbjct: 126 VGVPALVVYLNKVDQVD---DEELLELVELEVRELLSEYDFDGDNIPIVKGSALAALEG-----RDDNIGKESIVELMKAVDEHIPQPERPVDQDFLMPIEDVFSISGRGTVVTGRVETGVVNVGDEVEIVGIKDTTKTTVTGVEMFRKLLDRGEAGDNIGALIRGVGREDVERGQVL--AKPGSVTPHTEFSAEVYVLS 315
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_EHRCR (Elongation factor Tu OS=Ehrlichia chaffeensis (strain Arkansas) GN=tuf1 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13 Identity = 56/179 (31.28%), Postives = 90/179 (50.28%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY--KGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVAS 522 +GVK ++ NK D + + + ++E+ L K GY + + V S + +E T + K L++AL+ I+ P R DKP + ++DV+ I G GTV GR+E GV++ G + GL +T VEM H+AL GDN G ++ + +D++RG V S Sbjct: 125 VGVKDIVVWMNKCDVVDDEEMLSLVEMEIREL---LSKYGYPGDDIDVVRGSAVKA---LEEETGSGVWSEKIMELMNALEKISLPTREKDKPFLMSIEDVFSIPGRGTVVTGRIERGVIRVGDKIEI--VGLRDIQSTVCTGVEMFHKALDAGEAGDNAGILLRGIKKEDVERGQVLS 295
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_CHLFF (Elongation factor Tu OS=Chlamydophila felis (strain Fe/C-56) GN=tuf PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13 Identity = 58/178 (32.58%), Postives = 92/178 (51.69%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD-NMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 516 +GV ++ NK+D + + ++ D + E+S L++ GY + P + + EGD + +E+ L + A+D NI P+R DKP +P++DV+ I G GTV GR+E GV+K G V T E V VEM + L E G+NVG ++ + D++RG V Sbjct: 126 VGVPYIVVFLNKIDMISQEDAEL-VDLVEMELSELLEEKGY--KGCPIIRGSALKALEGDASYVEKIREL--------MQAVDDNIPTPEREIDKPFLMPIEDVFSISGRGTVVTGRIERGVVKVGDKVQIVGLRDTRESIVTGVEMFRKELPEGQAGENVGLLLRGIGKNDVERGMV 292
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_CHLAB (Elongation factor Tu OS=Chlamydophila abortus GN=tuf PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13 Identity = 58/178 (32.58%), Postives = 92/178 (51.69%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD-NMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 516 +GV ++ NK+D + + ++ D + E+S L++ GY + P + + EGD + +E+ L + A+D NI P+R DKP +P++DV+ I G GTV GR+E GV+K G V T E V VEM + L E G+NVG ++ + D++RG V Sbjct: 126 VGVPYIVVFLNKIDMISQEDAEL-VDLVEMELSELLEEKGY--KGCPIIRGSALKALEGDASYVEKIREL--------MQAVDDNIPTPEREVDKPFLMPIEDVFSISGRGTVVTGRIERGVVKVGDKVQIVGLRDTRETIVTGVEMFRKELPEGQAGENVGLLLRGIGKNDVERGMV 292
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_ARTS2 (Elongation factor Tu OS=Arthrobacter sp. (strain FB24) GN=tuf PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13 Identity = 58/179 (32.40%), Postives = 87/179 (48.60%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGF---EGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---VVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 516 +GV ++ NK D + D + EV L G++ ++ P V +SG EGD +W K L+ A+D ++ +P R DKP +P++DV+ I G GTV GR E G L +V P TT V +EM H+ L EA G+N G ++ + D++RG V Sbjct: 128 VGVPYLLVALNKADMVD---DEELLDLVEMEVRELLSSQGFDGDEAPVVRVSGLKALEGDP--------EWVKSVEDLMAAVDESVPDPVRDRDKPFLMPIEDVFTITGRGTVVTGRAERGTLAINSEVEIVGIRPVQKTT-VTGIEMFHKQLDEAWAGENCGLLLRGLKRDDVERGQV 294
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_ANASP (Elongation factor Tu OS=Anabaena sp. (strain PCC 7120) GN=tuf PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13 Identity = 55/181 (30.39%), Postives = 93/181 (51.38%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGP------TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 516 +GV +++ NK D A E+V+ E+ L + ++ + +P V SG + ++ ++ + P L+DA+D+ I +P+R DKP + ++DV+ I G GTV GR+E G +K G VV T T V +EM ++L E + GDN G ++ + D++RG V Sbjct: 126 VGVPKLVVFLNKEDMM----EDAELLELVELELRELLTEYEFDGDDIPIVRGSGLQALEVMTKNPKTQRGENPWVDKIYELMDAVDSYIPDPERDIDKPFLMAVEDVFSITGRGTVATGRIERGKVKVGDVVELVGIRDTRNTTVTGIEMFKKSLDEGMAGDNAGVLLRGIQKADIERGMV 302
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: CYSN_SHIDS (Sulfate adenylyltransferase subunit 1 OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=cysN PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13 Identity = 49/159 (30.82%), Postives = 82/159 (51.57%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYK-----IGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNV 465 LG+K ++ NKMD YS+ + I ++ ++ ++ N + + FVP+S EGDN+ +S ++ WY GPTLL+ L+ + + +P+R P+Q V + G GT+ GRVE G V PSG+ + V + +EA G+ + Sbjct: 158 LGIKHLVVAINKMDLMD--YSEETFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEV-----GQRVKVLPSGVESNVARIVTFDGDREEAFAGEAI 308 The following BLAST results are available for this feature:
BLAST of FC931663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931663 ID=FC931663; Name=FC931663; organism=Citrus clementina; type=EST; length=689bpback to top |