FC931663

Overview
NameFC931663
Unique NameFC931663
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: CYSN_PSYIN (Sulfate adenylyltransferase subunit 1 OS=Psychromonas ingrahamii (strain 37) GN=cysN PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13
Identity = 57/193 (29.53%), Postives = 94/193 (48.70%), Query Frame = 1
Query:    4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM 582
            LG+K ++   NKMDA    Y +A Y +I  +   + K++  N   + FVPIS  +GDN++  S N+ WY G  LL  L+ I      +DK  RL +Q V +         G V +G ++ G  +   PSG  ++VKS+      L+ A  G  +   +++    D+ RG +     + P   + NF + ++ M
Sbjct:  155 LGIKHLVVAVNKMDAVD--YDQAVYKKIKADYREFAKQL--NIADIRFVPISALKGDNVVNESENMTWYPGSPLLRLLNTIQIDTDINDK-FRLAVQYVNRPNLDFRGFCGTVASGEIRVGDTIQALPSGKQSKVKSIVTFDGELESAFAGMAITLTLEDEI--DISRGNMIVRPHEKPT-SSKNFVADLVWM 339          
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: CYSN_ECOLU (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=cysN PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13
Identity = 49/159 (30.82%), Postives = 82/159 (51.57%), Query Frame = 1
Query:    4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYK-----IGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNV 465
            LG+K ++   NKMD     YS+  +  I ++  ++  ++  N + + FVP+S  EGDN+  +S ++ WY GPTLL+ L+ +   +    +P+R P+Q V +      G  GT+  GRVE      G  V   PSG+ + V  +       +EA  G+ +
Sbjct:  158 LGIKHLVVAINKMDLVG--YSEETFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEV-----GQRVKVLPSGVESNVARIVTFDGDREEAFAGEAI 308          
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: CYSN_ECOLC (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=cysN PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13
Identity = 49/159 (30.82%), Postives = 82/159 (51.57%), Query Frame = 1
Query:    4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYK-----IGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNV 465
            LG+K ++   NKMD     YS+  +  I ++  ++  ++  N + + FVP+S  EGDN+  +S ++ WY GPTLL+ L+ +   +    +P+R P+Q V +      G  GT+  GRVE      G  V   PSG+ + V  +       +EA  G+ +
Sbjct:  158 LGIKHLVVAINKMDLVD--YSEKTFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESMAWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEV-----GQRVKVLPSGVESNVARIVTFDGDREEAFAGEAI 308          
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: CYSN_ECO27 (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=cysN PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13
Identity = 52/161 (32.30%), Postives = 80/161 (49.69%), Query Frame = 1
Query:    4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEK--VPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYK-----IGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNV 465
            LG+K ++   NKMD     YS+  +  I ++   YL   G  P    + FVP+S  EGDN+  +S ++ WY GPTLL+ L+ +   +    +P+R P+Q V +      G  GT+  GRVE      G  V   PSG+ + V  +       +EA  G+ +
Sbjct:  158 LGIKHLVVAINKMDLVD--YSEETFTRIRED---YLTFAGLLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEV-----GQRVKVLPSGVESNVARIVTFDGDREEAFAGEAI 308          
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: CYSN_COLP3 (Sulfate adenylyltransferase subunit 1 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=cysN PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13
Identity = 56/194 (28.87%), Postives = 93/194 (47.94%), Query Frame = 1
Query:    4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN 585
            LG+K ++   NKMD     YS+ RY EI KE   + + + ++   V FVP+S   GDN+++ S N+ WY G TL+  L+ I+   +     LR  +Q V +         G + +G +  G  +   PSG  + VK +  +   L+ A  G  V   +++    D+ RG +       P   A  F++ V+ M+
Sbjct:  155 LGIKHIVVAVNKMDLVD--YSQERYQEIKKEYREFTESLEFSD--VRFVPLSALNGDNVVDESVNMPWYPGATLMKLLNTIDVKTQEQFTQLRFQVQYVNRPNLDFRGFAGTLASGHVLVGDTIVALPSGKESVVKEIVTYDGNLERADKGMAVTLTLEDEI--DISRGEIIVKKGSLPI-SAKEFSATVVWMH 341          
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: CYSN_ALISL (Sulfate adenylyltransferase subunit 1 OS=Aliivibrio salmonicida (strain LFI1238) GN=cysN PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13
Identity = 57/204 (27.94%), Postives = 96/204 (47.06%), Query Frame = 1
Query:    4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPG-QIGNGY 612
            LG++  +   NKMD     YS++R++EI +E  ++ KK+      +  +P+S  EGDN++  S  L WYKG  LL+ L++I+      +   R P+Q V +         G V +G +K G  +   PSG  ++V  +      L  A  G  V   +++    D+ RG +   S  +       F ++++ M   G Q G  Y
Sbjct:  157 LGIRHFVVAVNKMDLVD--YSQSRFEEIKEEYVTFSKKLNNPNLDISILPLSALEGDNVVNHSAALAWYKGAPLLEVLEDIDIDADRGNGEFRFPVQYVNRPNLDFRGFSGSVSSGEIKVGDDIIALPSGKKSKVARIVTFDGDLPSAQAGQAVTLTLEDEI--DISRGDLLVKSTSN-LTATDQFKAEIVWMTEKGLQPGRQY 355          
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: CYSN_AERHH (Sulfate adenylyltransferase subunit 1 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=cysN PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13
Identity = 47/154 (30.52%), Postives = 77/154 (50.00%), Query Frame = 1
Query:    4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNV 465
            LG+KQ +   NKMD    ++S+  ++ I  E   + KK+    + +  VP+S  +GDN++  S  L WY+G TLL  L++    +     P+RLP+Q V +         G + +G+L+ G  +   PSG  + V  +      L  ALPG  +
Sbjct:  157 LGIKQFVVAVNKMDLV--EFSQEVFERISAEYREFAKKLSV--DTIHIVPVSALDGDNVVNPSDKLAWYQGETLLSLLESAEVERELERHPVRLPVQYVNRPNLDFRGFAGTLASGILRVGDKLAVLPSGKESTVTRIVTFDGDLDYALPGQAI 306          
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_THIDA (Elongation factor Tu OS=Thiobacillus denitrificans (strain ATCC 25259) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13
Identity = 67/228 (29.39%), Postives = 106/228 (46.49%), Query Frame = 1
Query:    4 LGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN-----HPGQIGNGYAPVLDCHTSHI 645
            +GV  +I   NK D        A   E+V+ EV   L K  +  +  P +    +   EGD       ++       L +ALD  I EP+R  DKP  +P++DV+ I G GTV  GRVE GV+K G  +     G+T  VK+    VEM  + L +   GDNVG  ++    ++++RG V   +K    +    F++++ +++           NGY P     T+ +
Sbjct:  126 VGVPYIIVYMNKADMV----DDAELLELVEMEVRELLSKYDFPGDDTPIIVGSALKALEGDQSDIGEPSII-----KLAEALDTYIPEPERAIDKPFLMPVEDVFSISGRGTVVTGRVERGVIKVGEEIEI--VGITPTVKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREEVQRGQVL--AKPGSIKPHTKFSAEIYVLSKDEGGRHTPFFNGYRPQFYFRTTDV 340          
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_TAXOC (Elongation factor Tu OS=Taxeobacter ocellatus GN=tuf PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13
Identity = 54/179 (30.17%), Postives = 87/179 (48.60%), Query Frame = 1
Query:    4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGD----NMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL---KPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 516
            +GV Q++   NK+D           +  ++E+ S+    G N   V    + G  GD      IE+           L+D++DN I  P R +D+P  +P++DV+ I G GTV  GR+E GV+   +P  ++  G   L + V  VEM  + L     GDNVG  ++ +  + ++RG V
Sbjct:  126 VGVPQLVVFMNKVDMVDDPELLELVEMEIRELLSFYDFDGDNIPVVQGSALGGLNGDAKWVGTIEQ-----------LMDSVDNWIPIPPRLTDQPFLMPVEDVFSITGRGTVATGRIERGVINSGEPVEILGMGAENLKSTVTGVEMFRKILDRGEAGDNVGLLLRGIEKEAIRRGMV 293          
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_STRAU (Elongation factor Tu OS=Streptomyces aureofaciens GN=tuf1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13
Identity = 57/182 (31.32%), Postives = 89/182 (48.90%), Query Frame = 1
Query:    4 LGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGF---EGDNMIERSTNLDWYKGPTLLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---VVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 516
            +GV  ++   NK D    +       E+V+ EV   L +  +  + +P V +S     EGD         +W  G  LL  +D ++E    P R +DKP  +P++DV+ I G GTV  GR+E GVLK      ++       TT V  +EM  + L E   G+NVG  ++ +  +D++RG V
Sbjct:  128 VGVPYIVVALNKADMVDDE----EILELVELEVRELLSEYDFPGDDLPVVQVSALKALEGDK--------EW--GDKLLGLMDAVDEAIPTPPRDTDKPFLMPVEDVFTITGRGTVVTGRIERGVLKVNETVDIIGIKTEKTTTTVTGIEMFRKLLDEGQAGENVGLLLRGIKREDVERGQV 295          
The following BLAST results are available for this feature:
BLAST of FC931663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSN_PSYIN1.346e-1329.53Sulfate adenylyltransferase subunit 1 OS=Psychromo... [more]
CYSN_ECOLU1.346e-1330.82Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECOLC1.346e-1330.82Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECO271.346e-1332.30Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_COLP31.346e-1328.87Sulfate adenylyltransferase subunit 1 OS=Colwellia... [more]
CYSN_ALISL1.346e-1327.94Sulfate adenylyltransferase subunit 1 OS=Aliivibri... [more]
CYSN_AERHH1.346e-1330.52Sulfate adenylyltransferase subunit 1 OS=Aeromonas... [more]
EFTU_THIDA1.758e-1329.39Elongation factor Tu OS=Thiobacillus denitrificans... [more]
EFTU_TAXOC1.758e-1330.17Elongation factor Tu OS=Taxeobacter ocellatus GN=t... [more]
EFTU_STRAU1.758e-1331.32Elongation factor Tu OS=Streptomyces aureofaciens ... [more]

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Properties
Property NameValue
Genbank descriptionC34107F06EF PostHarvP1 Citrus clementina cDNA clone C34107F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931663 ID=FC931663; Name=FC931663; organism=Citrus clementina; type=EST; length=689bp
ACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGACGCCAC
CACCCCCAAGTACTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCT
CTTCCTACCTGAAGAAGGTTGGATACAACCCCGAGAAAGTCCCATTCGTG
CCCATCTCTGGTTTCGAGGGTGACAACATGATTGAGAGGTCTACCAACCT
TGACTGGTACAAGGGTCCAACCCTGCTGGACGCTCTTGACAATATCAATG
AGCCGAAGAGGCCCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGTG
TACAAGATTGGTGGCATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCGG
TGTCCTCAAGCCTGGTATGGTGGTGACATTTGGCCCCTCTGGATTGACAA
CTGAGGTTAAGTCTGTTGAGATGCACCACGAAGCTCTGCAGGAGGCCCTT
CCGGGTGACAATGTTGGTTTCAACGTGAAGAACGTTGCTGTCAAGGATCT
CAAGCGTGGTTTTGTTGCTTCCAACTCGAAGGATGATCCGGCCAGAGAAG
CTGCCAACTTCACCTCACAGGTCATCATCATGAACCACCCTGGCCAGATT
GGAAATGGATATGCCCCAGTGCTTGACTGCCACACCTCCCACATTGCCGT
CAAGTTTTCTGAGCTCGTGACGAAGATTGATAGGCGATC
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