FC931663
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_MYCTA (Elongation factor Tu OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=tuf PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 64/201 (31.84%), Postives = 95/201 (47.26%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGF---EGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN 585 +GV ++ NK DA + + + EV L ++ E P V +S EGD S L++A+D +I +P R +DKP +P++DV+ I G GTV GRVE GV+ +V PS T V VEM + L + GDNVG ++ V +D++RG V +K F QV I++ Sbjct: 128 VGVPYILVALNKADAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGDAKWVASVE-------ELMNAVDESIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVINVNEEVEIVGIRPSTTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGVKREDVERGQVV--TKPGTTTPHTEFEGQVYILS 315
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_MYCBT (Elongation factor Tu OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=tuf PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 64/201 (31.84%), Postives = 95/201 (47.26%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGF---EGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN 585 +GV ++ NK DA + + + EV L ++ E P V +S EGD S L++A+D +I +P R +DKP +P++DV+ I G GTV GRVE GV+ +V PS T V VEM + L + GDNVG ++ V +D++RG V +K F QV I++ Sbjct: 128 VGVPYILVALNKADAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGDAKWVASVE-------ELMNAVDESIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVINVNEEVEIVGIRPSTTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGVKREDVERGQVV--TKPGTTTPHTEFEGQVYILS 315
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_MYCBP (Elongation factor Tu OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=tuf PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 64/201 (31.84%), Postives = 95/201 (47.26%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGF---EGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN 585 +GV ++ NK DA + + + EV L ++ E P V +S EGD S L++A+D +I +P R +DKP +P++DV+ I G GTV GRVE GV+ +V PS T V VEM + L + GDNVG ++ V +D++RG V +K F QV I++ Sbjct: 128 VGVPYILVALNKADAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGDAKWVASVE-------ELMNAVDESIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVINVNEEVEIVGIRPSTTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGVKREDVERGQVV--TKPGTTTPHTEFEGQVYILS 315
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_MYCBO (Elongation factor Tu OS=Mycobacterium bovis GN=tuf PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 64/201 (31.84%), Postives = 95/201 (47.26%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGF---EGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN 585 +GV ++ NK DA + + + EV L ++ E P V +S EGD S L++A+D +I +P R +DKP +P++DV+ I G GTV GRVE GV+ +V PS T V VEM + L + GDNVG ++ V +D++RG V +K F QV I++ Sbjct: 128 VGVPYILVALNKADAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGDAKWVASVE-------ELMNAVDESIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVINVNEEVEIVGIRPSTTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGVKREDVERGQVV--TKPGTTTPHTEFEGQVYILS 315
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_LEUCK (Elongation factor Tu OS=Leuconostoc citreum (strain KM20) GN=tuf PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 60/207 (28.99%), Postives = 100/207 (48.31%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGD----NMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVK-----SVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN 585 +GV+ ++ NK D + + + EV L + + + +P + + EGD +IE L+D +D+ I EPKR +DKP +P++DV+ I G GTV GRV+ GVL G + GL E+K +EM + L EA GDN+G ++ V +++RG V +K + F ++V +++ Sbjct: 126 VGVEYLVVFLNKTDLVD---DEELVELVEMEVRELLSEYDFPGDDIPVIKGSALKALEGDPEQVKVIEE-----------LMDTVDSYIPEPKRETDKPFLMPVEDVFTITGRGTVASGRVDRGVLTTGTEIEI--VGLKDEIKKTTVTGIEMFRKTLDEAQAGDNIGALLRGVDRNEIERGQVL--AKPGSIKTHKKFKAEVYVLS 314
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_GONPE (Elongation factor Tu, chloroplastic (Fragment) OS=Gonium pectorale GN=tufA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 63/204 (30.88%), Postives = 94/204 (46.08%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGP------TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM 582 +GV ++ NK D K + + EV L K + +++P +P S + + + P L+D +D+ I P+R +DKP L ++DV I G GTV GRVE G LK V F GL + V +EM + L E L GDNVG ++ V KD++RG V +K F +QV ++ Sbjct: 37 VGVPNIVVFLNKEDQVD---DKELLELVELEVRETLDKYEFPGDEIPVIPGSALLALEALIENPKTQRGENPWVDKIYQLMDKVDSYIPTPQRETDKPFLLAVEDVLSITGRGTVATGRVERGTLKISDTVEF--VGLKPTQSAVVTGLEMFKKTLDETLAGDNVGVLLRGVQKKDIERGMVI--AKPGTITPHTKFEAQVYVL 233
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_GEOSW (Elongation factor Tu OS=Geobacillus sp. (strain WCH70) GN=tuf PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 60/200 (30.00%), Postives = 95/200 (47.50%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM 582 +GV ++ NK D + + + EV L + + ++VP + + EGD E K L++A+D I P+R DKP +P++DV+ I G GTV GRVE G LK G +V +T V VEM + L +A GDN+G ++ V+ +++RG V +K F +QV ++ Sbjct: 126 VGVPYIVVFLNKCDMVD---DEELLELVEMEVRDLLSEYDFPGDEVPVIKGSALKALEGDPQWEE-------KIIELMNAVDEYIPTPQREIDKPFMMPIEDVFSITGRGTVATGRVERGTLKVGDAVEIVGLADEPKSTTVTGVEMFRKLLDQAEAGDNIGALLRGVSRDEVERGQVL--AKPGSITPHTKFKAQVYVL 313
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_EHRCJ (Elongation factor Tu OS=Ehrlichia canis (strain Jake) GN=tuf1 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 56/179 (31.28%), Postives = 90/179 (50.28%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY--KGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVAS 522 +GVK ++ NK D + + + ++E+ L K GY + + V S + +E T + K L++AL+ I+ P R DKP + ++DV+ I G GTV GR+E GV++ G + GL +T VEM H+AL GDN G ++ + +D++RG V S Sbjct: 125 VGVKDIVVWMNKCDVVDDEEMLSLVEMEIREL---LSKYGYPGDDIDVVRGSAVKA---LEEETGSGVWSEKIMELMNALEKISLPVREKDKPFLMSIEDVFSIPGRGTVVTGRIERGVIRVGDKIEI--VGLREIQSTVCTGVEMFHKALDAGEAGDNAGILLRGIKKEDVERGQVLS 295
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_DESDA (Elongation factor Tu OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=tuf PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 62/185 (33.51%), Postives = 88/185 (47.57%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD--NMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSK 531 +GV Q++ NK D + + + EV L + + VP + + E D N E LD LLDA D+ I EP R DKP +P++DV+ I G GTV GRVE GV+K G +V P+ TT VEM + L + GDN+G ++ D++RG V + K Sbjct: 126 VGVPQLVVFLNKCDLVD---DEELLELVELEVRELLSSYDFPGDDVPVIRGSALKALESDDPNSAEAKCILD------LLDACDSFIPEPVRDIDKPFLMPIEDVFSISGRGTVVTGRVERGVIKVGEEVEIVGIKPTVKTT-CTGVEMFRKLLDQGEAGDNIGALLRGTKRDDVERGQVLAAPK 300
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_CYAP7 (Elongation factor Tu OS=Cyanothece sp. (strain PCC 7424) GN=tuf PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 58/203 (28.57%), Postives = 95/203 (46.80%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEG-----DNMIERSTNLDWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM 582 +GV ++ NK D + + + EV L + + + +P V S + D + + DW K L+D +D I P+R DKP + ++DV+ I G GTV GR+E G +K G +V +T V VEM + L+E L GDNVG ++ V ++++RG V +K + F +V ++ Sbjct: 126 VGVPNLVVFLNKEDMVD---DEELLELVELEVRELLSEYEFPGDDIPIVKGSALKAVEALTDTPTIKKGDNDWVDKILALMDEVDAYIPTPERDIDKPFLMAIEDVFSISGRGTVATGRIERGKIKAGETVEIVGIKEKTKSTTVTGVEMFQKTLEEGLAGDNVGLLLRGVQKEEIERGMVI--AKPGSIKPHTQFEGEVYVL 323 The following BLAST results are available for this feature:
BLAST of FC931663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931663 ID=FC931663; Name=FC931663; organism=Citrus clementina; type=EST; length=689bpback to top |