FC931663
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_CYAA5 (Elongation factor Tu OS=Cyanothece sp. (strain ATCC 51142) GN=tuf PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 53/180 (29.44%), Postives = 87/180 (48.33%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNL-----DWYKGPT-LLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFG--PSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 516 +GV ++ NK D + + + EV L + + + +P + S N + + N+ +W L+ A+D NI EP+R DKP + ++DV+ I G GTV GR+E G +K G + +T V VEM + L E + GDNVG ++ + +D++RG V Sbjct: 126 VGVPSLVVFLNKKDQVD---DEELLELVELEVRELLSEYDFPGDDIPIISGSALMAVNALIDNPNIKPGENEWTDQVLELMKAVDDNIPEPEREIDKPFLMAVEDVFSISGRGTVATGRIERGKVKVGETIEIVGIRDTRSTTVTGVEMFQKTLDEGMAGDNVGLLLRGIKKEDIERGMV 302
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_CHLCV (Elongation factor Tu OS=Chlamydophila caviae GN=tuf PE=3 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 57/178 (32.02%), Postives = 92/178 (51.69%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD-NMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 516 +GV ++ NK+D + + ++ D + E+S L++ GY + P + + EGD + +E+ L + A+D NI P+R DKP +P++DV+ I G GTV GR+E G++K G V T E V VEM + L E G+NVG ++ + D++RG V Sbjct: 126 VGVPYIVVFLNKIDMISQEDAEL-VDLVEMELSELLEEKGY--KGCPIIRGSALKALEGDASYVEKIREL--------MQAVDDNIPTPEREVDKPFLMPIEDVFSISGRGTVVTGRIERGIVKVGDKVQIVGLRDTRETIVTGVEMFRKELPEGQAGENVGLLLRGIGKNDVERGMV 292
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_CHACO (Elongation factor Tu, chloroplastic OS=Chara connivens GN=tufA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 65/238 (27.31%), Postives = 109/238 (45.80%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLD-----WY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS-----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKID 681 +GV ++ NK D + D EV L + +KVP V S + N W K L+DA+D+ I PKR +KP +P++DV+ I G GTV GR+E G+LK G +V GL +++S +EM L++ G+N+G ++ + KD++RG V ++ F +QV I+ + G ++P + V+ +++ I+ Sbjct: 126 VGVPSIVVFLNKEDQVDDEEILQLVD---LEVRESLINYEFPGDKVPVVSGSALMALQALTEKPNTSRGENKWVDKIYELMDAVDSYIPTPKRDIEKPFLMPIEDVFSIQGRGTVATGRIERGILKLGDIVEL--IGLNEKIRSTVVTGLEMFRRLLEQGFAGENIGVLLRGIEKKDIERGMVI--AQPGTIEPHTRFEAQVYILRK--EEGGRHSPFFAGYRPQFFVRTADVTGVIE 354
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_CAMLR (Elongation factor Tu OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=tuf PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 65/239 (27.20%), Postives = 106/239 (44.35%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFG--PSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN-----HPGQIGNGYAPVLDCHTSHI--AVKFSELVTKI 678 +GV ++ NK D A E+V+ E+ L + + P + S + + + +W K +LD + D I P R +DK +P++DV+ I G GTV GR+E GV+K G + TT V VEM + + + GDNVG ++ +D++RG V + K +F ++V I+N N Y P T+ + A+K +E V + Sbjct: 126 VGVPYIVVFMNKADMV----DDAELLELVEMEIRELLSSYDFPGDDTPIISGSALQALEEAKAGQDGEWSK--KILDLMAAVDDYIPTPARDTDKDFLMPIEDVFSISGRGTVVTGRIEKGVVKVGDTIEIVGIRDTQTTTVTGVEMFRKEMDQGEAGDNVGVLLRGTKKEDVERGMVLAKPKS--ITPHTDFEAEVYILNKDEGGRHTPFFNNYRPQFYVRTTDVTGAIKLAEGVEMV 356
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_BRASO (Elongation factor Tu OS=Bradyrhizobium sp. (strain ORS278) GN=tuf PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 54/178 (30.34%), Postives = 87/178 (48.88%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 516 +GV ++ NK D + + EV L K + +K+P + S ++ D +L+ + N++E P+RP D+P +P++DV+ I G GTV GRVE GV+K G +V P+ TT V VEM + L + GDN+G ++ +D++RG V Sbjct: 126 VGVPALVVFLNKCDMVD---DPELLELVELEVRELLSKYEFPGDKIPIIKGSALAALEDSDKKLGHD-----AILELMRNVDEYIPQPERPIDQPFLMPVEDVFSISGRGTVVTGRVERGVIKVGEEIEIVGIRPTQKTT-VTGVEMFRKLLDQGQAGDNIGALLRGTKREDVERGQV 294
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_BRASB (Elongation factor Tu OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=tuf PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 54/178 (30.34%), Postives = 87/178 (48.88%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 516 +GV ++ NK D + + EV L K + +K+P + S ++ D +L+ + N++E P+RP D+P +P++DV+ I G GTV GRVE GV+K G +V P+ TT V VEM + L + GDN+G ++ +D++RG V Sbjct: 126 VGVPALVVFLNKCDMVD---DPELLELVELEVRELLSKYEFPGDKIPIIKGSALAALEDSDKKLGHD-----AILELMRNVDEYIPQPERPIDQPFLMPVEDVFSISGRGTVVTGRVERGVIKVGEEIEIVGIRPTQKTT-VTGVEMFRKLLDQGQAGDNIGALLRGTKREDVERGQV 294
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_ARTCA (Elongation factor Tu OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=tuf PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 57/178 (32.02%), Postives = 87/178 (48.88%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGF---EGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---VVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 516 +GV ++ NK D + D + EV L G++ ++ P V +SG EGD + +S L+ A+D ++ +P R DKP +P++DV+ I G GTV GR E G L +V P TT V +EM H+ L EA G+N G ++ + D++RG V Sbjct: 128 VGVPYLLVALNKSDMVD---DEELLDLVEMEVRELLSSQGFDGDEAPVVRVSGLKALEGDPVWVKSVE-------DLMAAVDESVPDPVRDRDKPFLMPIEDVFTITGRGTVVTGRAERGTLAINSEVEIVGIRPVQKTT-VTGIEMFHKQLDEAWAGENCGLLLRGLKRDDVERGQV 294
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU_ARTAT (Elongation factor Tu OS=Arthrobacter aurescens (strain TC1) GN=tuf PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 57/178 (32.02%), Postives = 87/178 (48.88%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGF---EGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---VVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 516 +GV ++ NK D + D + EV L G++ ++ P V +SG EGD + +S L+ A+D ++ +P R DKP +P++DV+ I G GTV GR E G L +V P TT V +EM H+ L EA G+N G ++ + D++RG V Sbjct: 128 VGVPYLLVALNKSDMVD---DEELLDLVEMEVRELLSSQGFDGDEAPVVRVSGLKALEGDPVWVKSVQ-------DLMAAVDESVPDPVRDRDKPFLMPIEDVFTITGRGTVVTGRAERGTLAINSEVEIVGIRPIQKTT-VTGIEMFHKQLDEAWAGENCGLLLRGLKRDDVERGQV 294
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: EFTU1_STRRA (Elongation factor Tu-1 OS=Streptomyces ramocissimus GN=tuf1 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 56/175 (32.00%), Postives = 87/175 (49.71%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---VVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 516 +GV ++ NK D + + V+E+ S + G + V + EGD +S LD L+ A+D +I EP+R DKP +P++DV+ I G GTV GR+E GVLK ++ TT V +EM + L E G+NVG ++ + +D++RG V Sbjct: 128 VGVPYIVVALNKADMVDDEEIMELVELEVRELLSEYEFPGDDLPVVRVSALKALEGDAQWTQSV-LD------LMKAVDESIPEPERDVDKPFLMPIEDVFTITGRGTVVTGRIERGVLKVNETVDIIGIKTEKTTTTVTGIEMFRKLLDEGQAGENVGLLLRGIKREDVERGQV 295
BLAST of FC931663 vs. ExPASy Swiss-Prot
Match: CYSN_SODGM (Sulfate adenylyltransferase subunit 1 OS=Sodalis glossinidius (strain morsitans) GN=cysN PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 49/169 (28.99%), Postives = 82/169 (48.52%), Query Frame = 1 Query: 4 LGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG 510 LG++ ++ NKMD + + + I ++ + +++ + + + FVP+S EGDN+ + WY GPTLLD L+ + +P R P+Q V + G V GVL+ G V PSG+T+ + + L EA G+ V +K+ D+ RG Sbjct: 158 LGIRHLVVAVNKMDLVA--FDEQIFQGIRQDYLRFAEQLPVDLD-ITFVPLSALEGDNVAALGKAMPWYNGPTLLDVLETVEVINLNEQQPARFPVQYVNRPNLDFRGYAGTVAAGVLRVGQAVKVLPSGVTSTISRIVTFDGDLTEAWAGEAVTLVLKDEV--DISRG 321 The following BLAST results are available for this feature:
BLAST of FC931663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931663 ID=FC931663; Name=FC931663; organism=Citrus clementina; type=EST; length=689bpback to top |