FC931664

Overview
NameFC931664
Unique NameFC931664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length541
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_BURS3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia sp. (strain 383) GN=metE PE=3 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 1.425e-74
Identity = 135/180 (75.00%), Postives = 153/180 (85.00%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L G+AF+  GWVQSYGSRCVKPPI++GD+SRPKAMTV W + AQS+T +PMKGMLTGPVTILNWSFVR+DQPR  +CYQ+ALAI++EV DLEKAG+ VIQIDEAALREGLPLR+++   YL WAV SFRIT  GVQD TQIHTHMCYS FNDII SI DMDADVITIE S SD +LL  F
Sbjct:  507 LDGYAFSQFGWVQSYGSRCVKPPILFGDISRPKAMTVEWITYAQSLTNKPMKGMLTGPVTILNWSFVRDDQPRSVSCYQLALAIREEVLDLEKAGVRVIQIDEAALREGLPLRRAQWGEYLKWAVESFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVITIETSRSDMELLDAF 686
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_FLAJ1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=metE PE=3 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 2.058e-73
Identity = 134/180 (74.44%), Postives = 147/180 (81.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GF FT NGWVQSYGSRCVKPP+IYGDVSRP  MTV WS  AQS+T++ +KGMLTGPVTIL WSFVRNDQPR ETC QIALA++DEV DLEKAGI +IQIDE A+REGLPLRK E A YLDWAV +FRI+  GV D TQIH HMCYS FNDII +I DMDADVITIE S S  +LL  F
Sbjct:  512 LDGFTFTKNGWVQSYGSRCVKPPVIYGDVSRPNPMTVKWSKYAQSLTSKWVKGMLTGPVTILQWSFVRNDQPRSETCTQIALAVRDEVVDLEKAGIKIIQIDEPAIREGLPLRKEEWAKYLDWAVKAFRISASGVNDDTQIHPHMCYSEFNDIIQNIADMDADVITIECSRSQMELLDAF 691
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_MARAV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metE PE=3 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 3.510e-73
Identity = 129/180 (71.67%), Postives = 154/180 (85.56%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L G+AFT  GWVQSYGSRCVKPPI++GD+ RP+AMTV W   AQS+T +P+KGMLTGPVTILNWSFVR+DQPR ++C Q+ALAI++EV+DLEKAG+N+IQIDEAALREGLPLR+S+ A YL+WA++SFRI   GV D+TQIHTHMCYS FNDII +I  MDADVITIE S SD +LL  F
Sbjct:  502 LDGYAFTRFGWVQSYGSRCVKPPILFGDIRRPQAMTVEWIRYAQSLTDKPVKGMLTGPVTILNWSFVRDDQPRKDSCLQLALAIREEVQDLEKAGVNIIQIDEAALREGLPLRQSDWATYLEWAINSFRIAANGVDDSTQIHTHMCYSEFNDIIEAIARMDADVITIETSRSDMELLDAF 681
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_BURVG (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=metE PE=3 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 2.275e-72
Identity = 129/180 (71.67%), Postives = 152/180 (84.44%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L G+AF+  GWVQSYGSRCVKPPI++GD+SRP AMTV W + AQS+T++PMKGMLTGPVTILNWSFVR+DQPR  +CYQ+ALAI+DEV DLE+AG+ VIQIDEAALREGLPLR+++   YL WA+ +FRI   GV+D TQIHTHMCYS FNDII SI +MDADVITIE S SD +LL  F
Sbjct:  507 LDGYAFSQFGWVQSYGSRCVKPPILFGDISRPSAMTVEWIAYAQSLTSKPMKGMLTGPVTILNWSFVRDDQPRSVSCYQLALAIRDEVLDLERAGVRVIQIDEAALREGLPLRRAQWPAYLKWAIDAFRIAANGVRDDTQIHTHMCYSEFNDIIASIAEMDADVITIETSRSDMELLDAF 686
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_BORA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella avium (strain 197N) GN=metE PE=3 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 2.971e-72
Identity = 130/180 (72.22%), Postives = 149/180 (82.78%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L+GFAFT NGWVQSYGSRCVKPPII+GDV+RP  MTV WSS AQS+T +P+KGMLTGPVTIL WSFVR+DQPR  TC Q+ALA++DEV DLEKAG+ VIQIDE A+REGLPLR+++   YLDWAV  FR++  GV D TQIHTHMCYS FNDII SI  MDADVITIE S S+ +LL  F
Sbjct:  509 LAGFAFTKNGWVQSYGSRCVKPPIIFGDVARPAPMTVGWSSYAQSLTDKPVKGMLTGPVTILQWSFVRDDQPREATCRQLALALRDEVLDLEKAGVKVIQIDEPAIREGLPLRRADWQAYLDWAVDCFRLSTAGVADDTQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF 688
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_BURP8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=metE PE=3 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 3.880e-72
Identity = 132/180 (73.33%), Postives = 149/180 (82.78%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L G+ F+  GWVQSYGSRCVKPPI++GD+SRPKAMTV W   AQ+ TA+PMKGMLTGPVTILNWSFVR+DQPR  +C Q+ALAI++EV DLEKAG+ VIQIDEAALREGLPLR+S+   YL WAV SFRI   GVQD TQIHTHMCYS FNDII SI +MDADVITIE S SD +LL  F
Sbjct:  507 LDGYVFSQFGWVQSYGSRCVKPPILFGDISRPKAMTVEWICYAQAQTAKPMKGMLTGPVTILNWSFVRDDQPRSVSCRQLALAIREEVLDLEKAGVRVIQIDEAALREGLPLRRSQWNEYLQWAVESFRIAANGVQDETQIHTHMCYSEFNDIIASIAEMDADVITIETSRSDMELLDAF 686
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_HAHCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Hahella chejuensis (strain KCTC 2396) GN=metE PE=3 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 1.129e-71
Identity = 130/180 (72.22%), Postives = 148/180 (82.22%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L G+ F+  GWVQSYGSRCVKPPII+GD+SRP+AMTV W   AQS+T RPMKGMLTGPVTILNWSFVR+DQPR  TCYQ+ALAI+ EV+DLE+AG+ +IQIDEAALREGLPLR+++   YL WAV SFRI   GV D TQIHTHMCYS FNDII +I  MDADVITIE S SD +LL  F
Sbjct:  502 LDGYVFSQFGWVQSYGSRCVKPPIIFGDISRPQAMTVEWIKYAQSLTDRPMKGMLTGPVTILNWSFVRDDQPRALTCYQLALAIRAEVQDLERAGVRIIQIDEAALREGLPLRRAQWREYLQWAVSSFRIAANGVADETQIHTHMCYSEFNDIIEAIAGMDADVITIETSRSDMELLDAF 681
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_NEIMF (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=metE PE=3 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 1.926e-71
Identity = 130/180 (72.22%), Postives = 150/180 (83.33%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            LSGFAFT  GWVQSYGSRCVKPPII+GDVSRP+AMTV WS+ AQS+T RPMKGMLTGPVTIL WSFVRND PR   C QIALA+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL+WA  SFR+++ G +D+TQIHTHMCYS FNDI+ +I  MDADVITIE S SD +LL+ F
Sbjct:  500 LSGFAFTQYGWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFVRNDIPRSTVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAGESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAF 679
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_NEIMB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup B GN=metE PE=1 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 1.926e-71
Identity = 130/180 (72.22%), Postives = 150/180 (83.33%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            LSGFAFT  GWVQSYGSRCVKPPII+GDVSRP+AMTV WS+ AQS+T RPMKGMLTGPVTIL WSFVRND PR   C QIALA+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL+WA  SFR+++ G +D+TQIHTHMCYS FNDI+ +I  MDADVITIE S SD +LL+ F
Sbjct:  500 LSGFAFTQYGWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFVRNDIPRSTVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAGESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAF 679
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_NEIMA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup A GN=metE PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.515e-71
Identity = 130/180 (72.22%), Postives = 150/180 (83.33%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            LSGFAFT  GWVQSYGSRCVKPPII+GDVSRP+AMTV WS+ AQS+T RPMKGMLTGPVTIL WSFVRND PR   C QIALA+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL+WA  SFR+++ G +D+TQIHTHMCYS FNDI+ +I  MDADVITIE S SD +LL+ F
Sbjct:  500 LSGFAFTQYGWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFVRNDIPRSTVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAGESFRLSSTGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAF 679
The following BLAST results are available for this feature:
BLAST of FC931664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
METE_BURS31.425e-7475.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_FLAJ12.058e-7374.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MARAV3.510e-7371.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURVG2.275e-7271.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORA12.971e-7272.225-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURP83.880e-7273.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAHCH1.129e-7172.225-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIMF1.926e-7172.225-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIMB1.926e-7172.225-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIMA2.515e-7172.225-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC34107F07EF PostHarvP1 Citrus clementina cDNA clone C34107F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931664 ID=FC931664; Name=FC931664; organism=Citrus clementina; type=EST; length=541bp
ATTATCAGGTTTCGCCTTCACTGCCAATGGGTGGGTGCAATCCTATGGAT
CTCGCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCGTCCCAAG
GCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACAGCTCGCCC
AATGAAAGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTG
TTAGAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCC
ATCAAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCA
AATTGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGC
ATGCTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGT
GGCGTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTT
CAACGACATTATCCACTCAATTATCGACATGGATGCTGATGTGATCACCA
TTGAGAACTCTCATTCTGATGAGAAGCTCCTGTCTGTCTTC
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