FC931664

Overview
NameFC931664
Unique NameFC931664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length541
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_PSESM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas syringae pv. tomato GN=metE PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 2.521e-63
Identity = 119/180 (66.11%), Postives = 138/180 (76.67%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L G+ FT  GWVQSYGSRCVKP II+GD+SRP+ MTV W   AQS+T + MKGMLTGPVT+L WSF R D  R     Q+ALAI+DEV DLE+AGI ++QIDEAA REGLPLRK++   YLDWAV +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE S SD +LL  F
Sbjct:  512 LDGYLFTRFGWVQSYGSRCVKPAIIFGDLSRPQPMTVDWIRYAQSLTDKTMKGMLTGPVTMLMWSFSREDVSRQVQAQQLALAIRDEVLDLERAGIKIVQIDEAAFREGLPLRKAQWQQYLDWAVAAFRLCASGVRDETQIHTHMCYSEFNDVIKSIAAMDADVITIETSRSDMELLDAF 691          
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_BLOFL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Blochmannia floridanus GN=metE PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 2.521e-63
Identity = 111/177 (62.71%), Postives = 142/177 (80.23%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLL 532
            L GF  + +GW+QSYGSRC+KPPII GD+SRP  +T+ W + AQS+T +P+KG+LTGP+TI+ WSF R D PRH    Q+ALAI+DEV DLEK+GI VIQIDE ALREGLPL+KSE ++YL WA+++F+IT   V+D TQIHTHMCYS FN+II  I+ +D DVI+IE+S SD +LL
Sbjct:  508 LKGFVSSQHGWIQSYGSRCIKPPIIIGDISRPIPITIPWINYAQSLTNKPVKGILTGPITIMTWSFAREDIPRHMIALQLALAIRDEVMDLEKSGIGVIQIDEPALREGLPLKKSEQSYYLKWAINTFKITVSSVKDNTQIHTHMCYSEFNEIIDDILKLDVDVISIESSRSDLQLL 684          
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_KLEP7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=metE PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 3.292e-63
Identity = 117/180 (65.00%), Postives = 137/180 (76.11%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GF FT NGWVQSYGSRCVKPP++ GDVSRP+A+TV W+  AQS+TA+P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI +IQIDE ALREGLPL++S+   YL W V +FR+     +D TQIHTHMCY  FNDI+ SI  +DADVITIE S SD +LL  F
Sbjct:  498 LDGFIFTQNGWVQSYGSRCVKPPVVIGDVSRPQAITVDWAKYAQSLTAKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLKRSDWDAYLQWGVEAFRLNAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESF 677          
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_DESRM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=metE PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 3.292e-63
Identity = 117/180 (65.00%), Postives = 139/180 (77.22%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            LSGF FT NGWVQSYGSRCVKP +I+GDVSRPK MT+     A+S T + +KGMLTGPVTILNWS+ R+D  R   C QIALAI+DE+ DL+KAGI +IQ+DEAA +EG PLRK + A+Y +WAV SF++        TQIHTHMCYS+FNDIIH+I  MDADVITIE S S  KLL+VF
Sbjct:  502 LSGFVFTQNGWVQSYGSRCVKPTVIFGDVSRPKPMTIDTILYAKSKTNKIVKGMLTGPVTILNWSYCRSDMERSAVCEQIALAIRDEINDLQKAGIKIIQVDEAAFKEGYPLRKEKVAYYENWAVKSFKLAVSSAAIETQIHTHMCYSDFNDIIHTIEKMDADVITIETSRSGNKLLTVF 681          
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_ERWCT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Erwinia carotovora subsp. atroseptica GN=metE PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 4.300e-63
Identity = 119/180 (66.11%), Postives = 136/180 (75.56%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GF FT NGWVQSYGSRCVKPP+I GDVSRP+A+TV W+  AQS+T +PMKGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI +IQIDE ALREGLPL +S+   YL WAV +FR+     +D TQIHTHMCY  FNDI+ SI  +DADVITIE S SD +LL  F
Sbjct:  498 LDGFVFTQNGWVQSYGSRCVKPPVIIGDVSRPEAITVEWAKYAQSLTDKPMKGMLTGPVTILCWSFPREDVTRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLHRSDWDAYLAWAVDAFRLNAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESF 677          
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_DESVM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=metE PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 4.300e-63
Identity = 118/180 (65.56%), Postives = 142/180 (78.89%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GF  TANGWVQSYG+RCVKPP++YGDV+RP  MTV W + AQS+T +P+KGMLTGPVTI  WSFVR+D PR     Q+ALAI+DEV DLE AGI VIQIDE ALREGLPLR++ HA YLD AV +FR+ + GV+D TQIHTHMCY +F+DII  +  +DADVI++E S S  +LL VF
Sbjct:  524 LRGFCITANGWVQSYGTRCVKPPLLYGDVARPGPMTVRWITHAQSLTQKPVKGMLTGPVTIACWSFVRDDVPRPVVFRQLALAIRDEVADLEAAGIGVIQIDEPALREGLPLRRAAHAAYLDAAVGAFRLASSGVRDATQIHTHMCYCDFHDIIDHVAALDADVISLEASRSRMELLDVF 703          
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_SALPK (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella paratyphi A (strain AKU_12601) GN=metE PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 5.616e-63
Identity = 116/180 (64.44%), Postives = 136/180 (75.56%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GF FT NGWVQSYGSRCVKPP++ GD+SRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI +IQIDE ALREGLPLR+S+   YL+W V +FRI     +D TQIHTHMCY  FNDI+ SI+ +DADVITIE S SD +LL  F
Sbjct:  498 LDGFVFTQNGWVQSYGSRCVKPPVVIGDISRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVTRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLEWGVEAFRINAAVAKDETQIHTHMCYCEFNDIMDSIVALDADVITIETSRSDMELLESF 677          
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_SALPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salmonella paratyphi A GN=metE PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 5.616e-63
Identity = 116/180 (64.44%), Postives = 136/180 (75.56%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GF FT NGWVQSYGSRCVKPP++ GD+SRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI +IQIDE ALREGLPLR+S+   YL+W V +FRI     +D TQIHTHMCY  FNDI+ SI+ +DADVITIE S SD +LL  F
Sbjct:  498 LDGFVFTQNGWVQSYGSRCVKPPVVIGDISRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVTRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLEWGVEAFRINAAVAKDETQIHTHMCYCEFNDIMDSIVALDADVITIETSRSDMELLESF 677          
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_PSEMY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas mendocina (strain ymp) GN=metE PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 5.616e-63
Identity = 118/180 (65.56%), Postives = 135/180 (75.00%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L G+AFT  GWVQSYGSRCVKP +I GD+ RP+AMTV W   AQ +T +PMKGMLTGPVT+L WSF R D  R     Q+ALAI+DEV DLE AGI +IQIDEAA REGLPLR++    YLDWA  +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE S SD +LL  F
Sbjct:  510 LDGYAFTRFGWVQSYGSRCVKPAVIVGDLGRPQAMTVEWIKYAQGLTDKPMKGMLTGPVTMLMWSFPREDVSREVQARQLALAIRDEVVDLEAAGIRIIQIDEAAFREGLPLRQAAWQGYLDWATEAFRLAASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAF 689          
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_PSEAE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa GN=metE PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 5.616e-63
Identity = 117/180 (65.00%), Postives = 136/180 (75.56%), Query Frame = 2
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L G+ FT  GWVQSYGSRCVKP +IYGD+SRP+AMTV W   AQS+T + MKGMLTGPVT+L WSF R D  R     Q+ALAI+DEV DLE AGI ++QIDEAA REGLPLR++    YL+WA  +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE S SD +LL  F
Sbjct:  507 LDGYVFTRFGWVQSYGSRCVKPAVIYGDLSRPRAMTVEWIRYAQSLTDKVMKGMLTGPVTMLMWSFPREDVSREVQARQLALAIRDEVVDLEAAGIRIVQIDEAAFREGLPLRRNAWPHYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAF 686          
The following BLAST results are available for this feature:
BLAST of FC931664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
METE_PSESM2.521e-6366.115-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BLOFL2.521e-6362.715-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_KLEP73.292e-6365.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DESRM3.292e-6365.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ERWCT4.300e-6366.115-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DESVM4.300e-6365.565-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALPK5.616e-6364.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALPA5.616e-6364.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEMY5.616e-6365.565-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEAE5.616e-6365.005-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC34107F07EF PostHarvP1 Citrus clementina cDNA clone C34107F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931664 ID=FC931664; Name=FC931664; organism=Citrus clementina; type=EST; length=541bp
ATTATCAGGTTTCGCCTTCACTGCCAATGGGTGGGTGCAATCCTATGGAT
CTCGCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCGTCCCAAG
GCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACAGCTCGCCC
AATGAAAGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTG
TTAGAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCC
ATCAAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCA
AATTGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGC
ATGCTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGT
GGCGTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTT
CAACGACATTATCCACTCAATTATCGACATGGATGCTGATGTGATCACCA
TTGAGAACTCTCATTCTGATGAGAAGCTCCTGTCTGTCTTC
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