FC931664

Overview
NameFC931664
Unique NameFC931664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length541
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_NEIM0 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup C (strain 053442) GN=metE PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.515e-71
Identity = 130/180 (72.22%), Postives = 150/180 (83.33%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            LSGFAFT  GWVQSYGSRCVKPPII+GDVSRP+AMTV WS+ AQS+T RPMKGMLTGPVTIL WSFVRND PR   C QIALA+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL+WA  SFR+++ G +D+TQIHTHMCYS FNDI+ +I  MDADVITIE S SD +LL+ F
Sbjct:  500 LSGFAFTQYGWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFVRNDIPRATVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAGESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAF 679
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_BORPD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=metE PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.515e-71
Identity = 128/180 (71.11%), Postives = 149/180 (82.78%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L+GFAFT NGWVQSYGSRCVKPPII+GDV+RP  MTV WSS AQS+T +P+KGMLTGPVTIL WSFVR+DQPR +TC Q+ALA++DEV DLE+AG+ VIQIDE A+REGLPLR+++   YLDWAV  FR++  GV   TQIHTHMCYS FNDII SI  MDADVITIE S S+ +LL  F
Sbjct:  509 LAGFAFTRNGWVQSYGSRCVKPPIIFGDVARPAPMTVGWSSYAQSLTDKPVKGMLTGPVTILQWSFVRDDQPREQTCRQLALALRDEVVDLEQAGVRVIQIDEPAIREGLPLRRADWQAYLDWAVDCFRLSTAGVAADTQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF 688
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_ALHEH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=metE PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 3.285e-71
Identity = 131/180 (72.78%), Postives = 145/180 (80.56%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GFAFT  GWVQSYGSRCVKPPIIYGDVSRP+ MTV WS  AQS+T RPMKGMLTGPVT+L WSFVR+DQPR ETC QIALA++DEV DLE AGI  IQIDE ALREGLPL++ +   YLDWAV  FR+T    QD TQIHTHMCYS FNDI+ +I  +DADVITIE S SD +LL VF
Sbjct:  504 LDGFAFTRAGWVQSYGSRCVKPPIIYGDVSRPRPMTVRWSEYAQSLTGRPMKGMLTGPVTVLQWSFVRDDQPRSETCRQIALALRDEVADLEAAGIPAIQIDEPALREGLPLQQRQWPGYLDWAVDCFRLTASVAQDATQIHTHMCYSEFNDIMGAIATLDADVITIETSRSDMELLEVF 683
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_RHOPT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodopseudomonas palustris (strain TIE-1) GN=metE PE=3 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 4.290e-71
Identity = 131/180 (72.78%), Postives = 146/180 (81.11%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            LSGFAFT  GWVQSYGSRCV+PPI++GDVSRPK MTV W   AQS+T RPMKGMLTGPVTILNWSFVR+D PR   C QIALAI+DEV DLE+AG  +IQIDEAALREGLPLR+SE   YLDWAV  FR+ + GV+D TQIHTHMCYS FNDII +I  MDADVI+IE S S  +LL  F
Sbjct:  530 LSGFAFTKEGWVQSYGSRCVRPPILFGDVSRPKPMTVGWWKYAQSLTGRPMKGMLTGPVTILNWSFVRDDVPRSTACLQIALAIRDEVGDLEQAGATMIQIDEAALREGLPLRRSEWKGYLDWAVECFRLCSSGVKDETQIHTHMCYSEFNDIIDAIAAMDADVISIETSRSKMELLDAF 709
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_RHOPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodopseudomonas palustris GN=metE PE=3 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 4.290e-71
Identity = 131/180 (72.78%), Postives = 146/180 (81.11%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            LSGFAFT  GWVQSYGSRCV+PPI++GDVSRPK MTV W   AQS+T RPMKGMLTGPVTILNWSFVR+D PR   C QIALAI+DEV DLE+AG  +IQIDEAALREGLPLR+SE   YLDWAV  FR+ + GV+D TQIHTHMCYS FNDII +I  MDADVI+IE S S  +LL  F
Sbjct:  530 LSGFAFTKEGWVQSYGSRCVRPPILFGDVSRPKPMTVGWWKYAQSLTGRPMKGMLTGPVTILNWSFVRDDVPRSTACLQIALAIRDEVGDLEQAGATMIQIDEAALREGLPLRRSEWKGYLDWAVECFRLCSSGVKDETQIHTHMCYSEFNDIIDAIAAMDADVISIETSRSKMELLDAF 709
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_RUTMC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=metE PE=3 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 5.603e-71
Identity = 125/180 (69.44%), Postives = 150/180 (83.33%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            LSG+ F+  GWVQSYGSRCVKPPII+GD+ RPK MT+ W + AQS+T +PMKGM+TGPVT+LNWSFVR+DQPR  TC Q++LAI+DEV DLEK+ IN+IQIDEAALREGLPLRKS+   YLDWA+ ++R++  GV D TQIHTHMCYS FNDII +I  MDADVITIE S SD +LL +F
Sbjct:  503 LSGYVFSQFGWVQSYGSRCVKPPIIFGDIFRPKPMTLDWITYAQSLTNKPMKGMITGPVTMLNWSFVRDDQPRATTCLQLSLAIRDEVLDLEKSNINIIQIDEAALREGLPLRKSQWQTYLDWAIRAYRVSANGVSDETQIHTHMCYSEFNDIIEAIAQMDADVITIETSRSDMELLDIF 682
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_NEIG1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=metE PE=3 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 5.603e-71
Identity = 129/180 (71.67%), Postives = 150/180 (83.33%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            LSGFAFT  GWVQSYGSRCVKPPII+GDVSRP+AMTV WS+ AQ++T RPMKGMLTGPVTIL WSFVRND PR   C QIALA+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL+WA  SFR+++ G +D+TQIHTHMCYS FNDI+ +I  MDADVITIE S SD +LL+ F
Sbjct:  500 LSGFAFTQYGWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQNLTKRPMKGMLTGPVTILQWSFVRNDIPRATVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAGESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLAAF 679
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_BORPE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella pertussis GN=metE PE=3 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 5.603e-71
Identity = 128/180 (71.11%), Postives = 148/180 (82.22%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L+GFAFT NGWVQSYGSRCVKPPII+GDV+RP  MTV WS+ AQS+T +P+KGMLTGPVTIL WSFVR+DQPR  TC Q+ALA++DEV DLE AGI VIQIDE A+REGLPLR+++   YLDWAV  FR++  GV + TQIHTHMCYS FNDII SI  MDADVITIE S S+ +LL  F
Sbjct:  509 LAGFAFTKNGWVQSYGSRCVKPPIIFGDVARPAPMTVGWSAYAQSLTDKPVKGMLTGPVTILQWSFVRDDQPREATCRQLALALRDEVVDLEAAGIRVIQIDEPAIREGLPLRRADWRAYLDWAVDCFRLSTAGVGEATQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF 688
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_BORPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella parapertussis GN=metE PE=3 SV=2)

HSP 1 Score: 266.544 bits (680), Expect = 5.603e-71
Identity = 128/180 (71.11%), Postives = 148/180 (82.22%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L+GFAFT NGWVQSYGSRCVKPPII+GDV+RP  MTV WS+ AQS+T +P+KGMLTGPVTIL WSFVR+DQPR  TC Q+ALA++DEV DLE AGI VIQIDE A+REGLPLR+++   YLDWAV  FR++  GV + TQIHTHMCYS FNDII SI  MDADVITIE S S+ +LL  F
Sbjct:  509 LAGFAFTKNGWVQSYGSRCVKPPIIFGDVARPAPMTVGWSAYAQSLTDKPVKGMLTGPVTILQWSFVRDDQPREATCRQLALALRDEVVDLEAAGIRVIQIDEPAIREGLPLRRADWRAYLDWAVDCFRLSTAGVGEATQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF 688
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_BORBR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella bronchiseptica GN=metE PE=3 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 5.603e-71
Identity = 128/180 (71.11%), Postives = 148/180 (82.22%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L+GFAFT NGWVQSYGSRCVKPPII+GDV+RP  MTV WS+ AQS+T +P+KGMLTGPVTIL WSFVR+DQPR  TC Q+ALA++DEV DLE AGI VIQIDE A+REGLPLR+++   YLDWAV  FR++  GV + TQIHTHMCYS FNDII SI  MDADVITIE S S+ +LL  F
Sbjct:  509 LAGFAFTKNGWVQSYGSRCVKPPIIFGDVARPAPMTVGWSAYAQSLTDKPVKGMLTGPVTILQWSFVRDDQPREATCRQLALALRDEVVDLEAAGIRVIQIDEPAIREGLPLRRADWRAYLDWAVDCFRLSTAGVGEATQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF 688
The following BLAST results are available for this feature:
BLAST of FC931664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
METE_NEIM02.515e-7172.225-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORPD2.515e-7171.115-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ALHEH3.285e-7172.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHOPT4.290e-7172.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHOPA4.290e-7172.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RUTMC5.603e-7169.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIG15.603e-7171.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORPE5.603e-7171.115-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORPA5.603e-7171.115-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORBR5.603e-7171.115-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC34107F07EF PostHarvP1 Citrus clementina cDNA clone C34107F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931664 ID=FC931664; Name=FC931664; organism=Citrus clementina; type=EST; length=541bp
ATTATCAGGTTTCGCCTTCACTGCCAATGGGTGGGTGCAATCCTATGGAT
CTCGCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCGTCCCAAG
GCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACAGCTCGCCC
AATGAAAGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTG
TTAGAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCC
ATCAAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCA
AATTGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGC
ATGCTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGT
GGCGTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTT
CAACGACATTATCCACTCAATTATCGACATGGATGCTGATGTGATCACCA
TTGAGAACTCTCATTCTGATGAGAAGCTCCTGTCTGTCTTC
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