FC931664

Overview
NameFC931664
Unique NameFC931664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length541
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_RALSO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia solanacearum GN=metE PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 5.244e-69
Identity = 125/180 (69.44%), Postives = 145/180 (80.56%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L G+AFTANGWVQSYGSRCVKPP+IYGDV RP+ MTV WS  AQS+TA+PMKGMLTGPVT+L WSFVR+DQPR +T  QIALA++DEV DLE AGI  IQIDE A REGLPLR  + A YL+WA   FR++  GV++ TQIHTHMCYS FNDI+ +I  MDADVITIE S S+ +LL  F
Sbjct:  499 LWGYAFTANGWVQSYGSRCVKPPVIYGDVYRPEPMTVEWSRYAQSLTAKPMKGMLTGPVTMLQWSFVRDDQPREQTALQIALALRDEVRDLEAAGIAAIQIDEPAFREGLPLRAGDVAVYLEWAARVFRVSASGVRNDTQIHTHMCYSEFNDILPAIASMDADVITIETSRSNMELLDAF 678
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_RALPJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia pickettii (strain 12J) GN=metE PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 5.244e-69
Identity = 125/180 (69.44%), Postives = 147/180 (81.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L G+AFTANGWVQSYGSRCVKPP+IYGDV RP+AMTV WS  AQS+T++PMKGMLTGPVT+L WSFVR+DQPR +T  QIALA++DEV DLE AGI  IQIDE A REGLPLR S+   YL+WA  +FR++  GV++ TQIHTHMCYS FNDI+ +I  MDADVITIE S S+ +LL  F
Sbjct:  502 LWGYAFTANGWVQSYGSRCVKPPVIYGDVYRPEAMTVEWSKYAQSLTSKPMKGMLTGPVTMLQWSFVRDDQPREQTALQIALALRDEVCDLEAAGIAAIQIDEPAFREGLPLRASDVPTYLEWAARAFRVSASGVRNDTQIHTHMCYSEFNDILPAIASMDADVITIETSRSNMELLDAF 681
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_SACD2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=metE PE=3 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 6.849e-69
Identity = 122/180 (67.78%), Postives = 147/180 (81.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L G+ FT  GWVQSYGSRCVKPPII+GDVSRP+ +TV W+  AQS+T++P+KGMLTGP+T+L WSFVR+DQPR  T  QIALA++ EV DLE AGI +IQ+DE ALREGLPLRK +   YLDWAV +F+I+  GV DTTQIHTHMCY+ FNDII +I D+DADVITIE S S+ +LLS F
Sbjct:  508 LDGYVFTQFGWVQSYGSRCVKPPIIFGDVSRPRKITVDWAEYAQSLTSKPVKGMLTGPITMLQWSFVRDDQPRKITAQQIALALRSEVNDLEAAGITIIQVDEPALREGLPLRKKDWQNYLDWAVEAFKISTAGVGDTTQIHTHMCYAEFNDIIQAIADLDADVITIETSRSNMELLSAF 687
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_DICDI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Dictyostelium discoideum GN=metE PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 8.946e-69
Identity = 124/180 (68.89%), Postives = 147/180 (81.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L+GF FT NGWVQSYGSRCVKPPIIYGDV+RP  MT+ +++ AQ++T +PMKGMLTGPVTIL WSFVR+DQPR ETC+QI LAI+DEV DLE  GI  IQIDE A+REGLPLR S+   YL WA+ SF +++ GV+D+TQIH+HMCYS+FNDI  SI  MD DV+TIENS SD KLL  F
Sbjct:  565 LAGFVFTQNGWVQSYGSRCVKPPIIYGDVNRPVPMTLEYTTFAQTLTTKPMKGMLTGPVTILQWSFVRDDQPRSETCFQIGLAIRDEVTDLENKGIACIQIDEPAIREGLPLRLSDWNQYLKWAIDSFLLSSTGVKDSTQIHSHMCYSDFNDIFESIQRMDTDVLTIENSKSDLKLLKAF 744
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_CYTH3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=metE PE=3 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 1.993e-68
Identity = 124/180 (68.89%), Postives = 143/180 (79.44%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L G+ F+ NGWVQSYGSRCVKPPIIYGD+ R + MTV W++LAQS+T + MKGMLTGPVTIL WSFVR+DQPR +TC QIA AI+DEV DLE AGI +IQIDE A+REGLPLR+     YL+WAV  FRI+  GV+D TQIHTHMCYS FNDII +I  MDADVITIE S S  +LL  F
Sbjct:  515 LKGYVFSENGWVQSYGSRCVKPPIIYGDIERTEPMTVAWTTLAQSLTKKYMKGMLTGPVTILQWSFVRDDQPRRDTCMQIAFAIRDEVVDLEAAGIKIIQIDEPAIREGLPLRRENWETYLNWAVECFRISASGVKDETQIHTHMCYSEFNDIIKNIAAMDADVITIETSRSQMELLDAF 694
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_NITOC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=metE PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 2.603e-68
Identity = 123/180 (68.33%), Postives = 144/180 (80.00%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GFAFT NGWVQSYGSRCVKPPIIYGDV R + MTV W   AQS+T+R +KGMLTGPVT+L WSFVR+DQPR +TC Q+AL ++DEV DLE+A I +IQ+DE A REGLPLR+ E   YL WAV  FR+ + GV+D TQIHTHMCYS FNDIIH+I  +DADVITIE S SD +LL+ F
Sbjct:  503 LEGFAFTQNGWVQSYGSRCVKPPIIYGDVVRRQPMTVAWLRYAQSLTSRRVKGMLTGPVTLLQWSFVRDDQPRADTCLQLALVLRDEVRDLEQADIKLIQVDEPAFREGLPLRRVEWESYLAWAVRCFRVASSGVEDGTQIHTHMCYSEFNDIIHAIAALDADVITIETSRSDGELLAAF 682
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_NITEU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrosomonas europaea GN=metE PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 7.573e-68
Identity = 123/180 (68.33%), Postives = 144/180 (80.00%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L G+AFT NGWVQSYGSRCVKPPI+YGDV RP+AMTV W   AQS T +P+KGMLTGPVT+L WSFVR+DQPR  T  Q+ALAI+DEV DLE AGI +IQIDE A REGLPLRK +   YLDWAV +FR+ + GV+D TQIHTHMCYS F+DI+ +I ++DADVITIE S S  +LL  F
Sbjct:  500 LWGYAFTENGWVQSYGSRCVKPPILYGDVYRPEAMTVEWIKYAQSQTGKPVKGMLTGPVTMLMWSFVRDDQPRSTTALQLALAIRDEVADLENAGIGMIQIDEPAFREGLPLRKQDWKSYLDWAVKAFRVASSGVKDETQIHTHMCYSEFHDILPAIAELDADVITIETSRSRMELLDAF 679
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_BRAJA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bradyrhizobium japonicum GN=metE PE=3 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 9.890e-68
Identity = 125/180 (69.44%), Postives = 144/180 (80.00%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L+GFAFT NGWVQSYGSRCV+PPI++GDV RPK +TV W   AQS+T++PMK MLTGPVTILNWSFVR+D PR E C Q+ALA++DEV DLE AG  +IQIDEAALREGLPLR+S+   YLDWA   FRI + GV D TQIHTHMCYS FNDII +I  MDADVI+IE S S  +LL  F
Sbjct:  520 LAGFAFTRNGWVQSYGSRCVRPPILFGDVVRPKPITVEWWRYAQSLTSKPMKAMLTGPVTILNWSFVRDDIPRSEVCRQLALAMRDEVRDLENAGAAMIQIDEAALREGLPLRRSDWKAYLDWAGDCFRICSSGVTDQTQIHTHMCYSEFNDIIGAIAAMDADVISIETSRSKMELLDAF 699
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_HAES1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus somnus (strain 129Pt) GN=metE PE=3 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 1.292e-67
Identity = 124/180 (68.89%), Postives = 143/180 (79.44%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GFAFT  GWVQSYGSRCVKPP+IYGDV RPKAMTV WS  AQS+T + MKGMLTGPVTIL WSFVRND PR   C QI +A+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL WA  +FR+++ GV D TQIHTHMCYS FNDI+ +I  +DADVITIE S SD +LL+ F
Sbjct:  500 LDGFAFTKFGWVQSYGSRCVKPPVIYGDVVRPKAMTVRWSKYAQSLTKKVMKGMLTGPVTILQWSFVRNDIPRSTVCKQIGVALSDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDTYLQWAGEAFRLSSMGVADDTQIHTHMCYSEFNDILPAIAALDADVITIETSRSDMELLTAF 679
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_CHRVO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chromobacterium violaceum GN=metE PE=3 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 1.292e-67
Identity = 124/180 (68.89%), Postives = 145/180 (80.56%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L+GFAFTA GWVQSYGSRCVKPPII+GDV+RPK MTV W+  AQS+TA+P+KGMLTGPVTIL WSFVR+D PR E C QIALA+ DEV DLE AGI VIQIDE A+REGLPL+++    YL WA  +FR+++ GV D TQIHTHMCYS F DI+ +I  +DADVITIE S SD  LL+ F
Sbjct:  500 LAGFAFTAGGWVQSYGSRCVKPPIIFGDVARPKPMTVDWARYAQSLTAKPVKGMLTGPVTILQWSFVRDDLPRREVCRQIALALNDEVLDLEAAGIRVIQIDEPAIREGLPLKRAGRDVYLAWAGEAFRLSSRGVDDATQIHTHMCYSEFGDILPAIAALDADVITIETSRSDMALLADF 679
The following BLAST results are available for this feature:
BLAST of FC931664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
METE_RALSO5.244e-6969.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALPJ5.244e-6969.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SACD26.849e-6967.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DICDI8.946e-6968.895-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CYTH31.993e-6868.895-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NITOC2.603e-6868.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NITEU7.573e-6868.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BRAJA9.890e-6869.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAES11.292e-6768.895-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHRVO1.292e-6768.895-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC34107F07EF PostHarvP1 Citrus clementina cDNA clone C34107F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931664 ID=FC931664; Name=FC931664; organism=Citrus clementina; type=EST; length=541bp
ATTATCAGGTTTCGCCTTCACTGCCAATGGGTGGGTGCAATCCTATGGAT
CTCGCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCGTCCCAAG
GCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACAGCTCGCCC
AATGAAAGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTG
TTAGAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCC
ATCAAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCA
AATTGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGC
ATGCTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGT
GGCGTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTT
CAACGACATTATCCACTCAATTATCGACATGGATGCTGATGTGATCACCA
TTGAGAACTCTCATTCTGATGAGAAGCTCCTGTCTGTCTTC
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