FC931664

Overview
NameFC931664
Unique NameFC931664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length541
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_PELCD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=metE PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 2.203e-67
Identity = 125/179 (69.83%), Postives = 143/179 (79.89%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSV 538
            L+GF FT NGWVQ YGSRCVKPPIIYGDV R K MT+ W++ AQ  T RP+KGMLTGPVT+L WSFVR+DQPR  TC QIALAI+DEV+DLE+AGI +IQ+DEAALREGLPLRKS    YL WAV +FR+T  GV D+TQIHTHMCYS FN I   I  MDADVI+IE S S+ +LL V
Sbjct:  500 LAGFCFTENGWVQGYGSRCVKPPIIYGDVERLKPMTMEWTTYAQQQTNRPLKGMLTGPVTMLCWSFVRDDQPRSATCKQIALAIRDEVQDLEQAGIKIIQVDEAALREGLPLRKSAWREYLGWAVDAFRLTASGVADSTQIHTHMCYSEFNHIAEWIAKMDADVISIEASRSNMELLGV 678
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_MESSB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesorhizobium sp. (strain BNC1) GN=metE PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 2.203e-67
Identity = 122/180 (67.78%), Postives = 144/180 (80.00%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            LSG+AFT  GWVQSYGSRCV+PPII+GDVSRP+ MTV W++ AQS+T +P+KGMLTGPVT+L WSFVR+D PR   C QIA A++DEV DLE AGI VIQIDE ALREGLPLR++E   YLDWAV  FR+ + GV+  TQIHTHMCY+ FNDII +I  MDADVI+IE S S  +LL  F
Sbjct:  514 LSGYAFTKQGWVQSYGSRCVRPPIIFGDVSRPQPMTVDWATYAQSLTDKPVKGMLTGPVTMLQWSFVRDDLPRETVCRQIAFALRDEVSDLEAAGIGVIQIDEPALREGLPLREAERPAYLDWAVECFRLASSGVKPETQIHTHMCYAEFNDIIDAIAAMDADVISIETSRSKMELLRAF 693
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_CAUCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Caulobacter crescentus GN=metE PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 2.203e-67
Identity = 125/180 (69.44%), Postives = 141/180 (78.33%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L+GFAFT +GWVQSYGSRCV+PPI++GDVSRP  MTV W   AQ +T RPMKGMLTGPVTILNWSFVR+D PR   C QIALAI+DEV DLE  G  +IQIDEAALREGLPLR+ +   YLDWAV SFR+   GV D TQIHTHMCYS FNDII +I  MDADVI+IE + S  +LL  F
Sbjct:  522 LAGFAFTQSGWVQSYGSRCVRPPILFGDVSRPAPMTVDWWRYAQGLTRRPMKGMLTGPVTILNWSFVRDDLPRETACRQIALAIRDEVVDLEATGAAIIQIDEAALREGLPLRRGDWDAYLDWAVESFRLAASGVADATQIHTHMCYSEFNDIIAAIGAMDADVISIETARSKMELLDAF 701
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_HAEIN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus influenzae GN=metE PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 3.758e-67
Identity = 123/180 (68.33%), Postives = 143/180 (79.44%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GFAFT  GWVQSYGSRCVKPP+IYGDV+RP+ MTV WS  AQS+T R MKGMLTGPVTIL WSFVRND PR   C QI +A+ DEV DLE AGI VIQIDE A+REGLPL++++   YL WA  +FR+++ GVQD TQIHTHMCYS FNDI+ +I  +DADVITIE S SD +LL+ F
Sbjct:  499 LDGFAFTKFGWVQSYGSRCVKPPVIYGDVTRPEPMTVRWSQYAQSLTNRVMKGMLTGPVTILQWSFVRNDIPRSTVCKQIGVALSDEVLDLEAAGIKVIQIDEPAIREGLPLKRADWDAYLQWAGEAFRLSSMGVQDDTQIHTHMCYSEFNDILPAIAALDADVITIETSRSDMELLTAF 678
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_HAEIE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus influenzae (strain PittEE) GN=metE PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 3.758e-67
Identity = 123/180 (68.33%), Postives = 143/180 (79.44%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GFAFT  GWVQSYGSRCVKPP+IYGDV+RP+ MTV WS  AQS+T R MKGMLTGPVTIL WSFVRND PR   C QI +A+ DEV DLE AGI VIQIDE A+REGLPL++++   YL WA  +FR+++ GVQD TQIHTHMCYS FNDI+ +I  +DADVITIE S SD +LL+ F
Sbjct:  499 LDGFAFTKFGWVQSYGSRCVKPPVIYGDVTRPEPMTVRWSQYAQSLTNRVMKGMLTGPVTILQWSFVRNDIPRSTVCKQIGVALSDEVLDLEAAGIKVIQIDEPAIREGLPLKRADWDAYLQWAGEAFRLSSMGVQDDTQIHTHMCYSEFNDILPAIAALDADVITIETSRSDMELLTAF 678
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_PASMU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pasteurella multocida GN=metE PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 6.411e-67
Identity = 123/180 (68.33%), Postives = 142/180 (78.89%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GFAFT  GWVQSYGSRCVKPP+IYGDV RP+ MTV WS  AQS+T + MKGMLTGPVTIL WSFVRND PR   C QI +A+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL WA  +FR++  GVQD TQIHTHMCYS FNDI+ +I  +DADVITIE S SD +LL+ F
Sbjct:  500 LDGFAFTKFGWVQSYGSRCVKPPVIYGDVVRPEPMTVRWSQYAQSLTNKVMKGMLTGPVTILQWSFVRNDIPRSTVCKQIGVALSDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLQWAGEAFRLSYMGVQDDTQIHTHMCYSEFNDILPAIAGLDADVITIETSRSDMELLTAF 679
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_HAEIG (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus influenzae (strain PittGG) GN=metE PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 8.373e-67
Identity = 123/180 (68.33%), Postives = 142/180 (78.89%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GFAFT  GWVQSYGSRCVKPP+IYGDV RP+ MTV WS  AQS+T R MKGMLTGPVTIL WSFVRND PR   C QI +A+ DEV DLE AGI VIQIDE A+REGLPL++++   YL WA  +FR+++ GVQD TQIHTHMCYS FNDI+ +I  +DADVITIE S SD +LL+ F
Sbjct:  499 LDGFAFTKFGWVQSYGSRCVKPPVIYGDVIRPEPMTVRWSQYAQSLTNRVMKGMLTGPVTILQWSFVRNDIPRSTVCKQIGVALSDEVLDLEAAGIKVIQIDEPAIREGLPLKRADWDAYLQWAGEAFRLSSMGVQDDTQIHTHMCYSEFNDILPAIAALDADVITIETSRSDMELLTAF 678
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_ACTPJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=metE PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 8.373e-67
Identity = 122/180 (67.78%), Postives = 143/180 (79.44%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GFAFT  GWVQSYGSRCVKPP+IYGDV+RP+ MTV WS  AQS+T + MKGMLTGPVTIL WSFVRND PR   C QI +A+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL WA  +FR++  GV+D TQIHTHMCYS FNDI+ +I  +DADVITIE S SD +LL+ F
Sbjct:  499 LDGFAFTKFGWVQSYGSRCVKPPVIYGDVTRPEPMTVRWSQYAQSLTDKVMKGMLTGPVTILQWSFVRNDIPRSTVCKQIGVALSDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLQWAGEAFRLSYMGVKDDTQIHTHMCYSEFNDILPAIAGLDADVITIETSRSDMELLTAF 678
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_ACTP7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=metE PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 8.373e-67
Identity = 122/180 (67.78%), Postives = 143/180 (79.44%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GFAFT  GWVQSYGSRCVKPP+IYGDV+RP+ MTV WS  AQS+T + MKGMLTGPVTIL WSFVRND PR   C QI +A+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL WA  +FR++  GV+D TQIHTHMCYS FNDI+ +I  +DADVITIE S SD +LL+ F
Sbjct:  499 LDGFAFTKFGWVQSYGSRCVKPPVIYGDVTRPEPMTVRWSQYAQSLTDKVMKGMLTGPVTILQWSFVRNDIPRSTVCKQIGVALSDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLQWAGEAFRLSYMGVKDDTQIHTHMCYSEFNDILPAIAGLDADVITIETSRSDMELLTAF 678
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_ACTP2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=metE PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 8.373e-67
Identity = 122/180 (67.78%), Postives = 143/180 (79.44%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GFAFT  GWVQSYGSRCVKPP+IYGDV+RP+ MTV WS  AQS+T + MKGMLTGPVTIL WSFVRND PR   C QI +A+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL WA  +FR++  GV+D TQIHTHMCYS FNDI+ +I  +DADVITIE S SD +LL+ F
Sbjct:  499 LDGFAFTKFGWVQSYGSRCVKPPVIYGDVTRPEPMTVRWSQYAQSLTDKVMKGMLTGPVTILQWSFVRNDIPRSTVCKQIGVALSDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLQWAGEAFRLSYMGVKDDTQIHTHMCYSEFNDILPAIAGLDADVITIETSRSDMELLTAF 678
The following BLAST results are available for this feature:
BLAST of FC931664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
METE_PELCD2.203e-6769.835-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MESSB2.203e-6767.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAUCR2.203e-6769.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAEIN3.758e-6768.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAEIE3.758e-6768.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PASMU6.411e-6768.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAEIG8.373e-6768.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACTPJ8.373e-6767.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACTP78.373e-6767.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACTP28.373e-6767.785-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC34107F07EF PostHarvP1 Citrus clementina cDNA clone C34107F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931664 ID=FC931664; Name=FC931664; organism=Citrus clementina; type=EST; length=541bp
ATTATCAGGTTTCGCCTTCACTGCCAATGGGTGGGTGCAATCCTATGGAT
CTCGCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCGTCCCAAG
GCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACAGCTCGCCC
AATGAAAGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTG
TTAGAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCC
ATCAAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCA
AATTGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGC
ATGCTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGT
GGCGTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTT
CAACGACATTATCCACTCAATTATCGACATGGATGCTGATGTGATCACCA
TTGAGAACTCTCATTCTGATGAGAAGCTCCTGTCTGTCTTC
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