FC931664

Overview
NameFC931664
Unique NameFC931664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length541
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_BURM7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia mallei (strain NCTC 10247) GN=metE PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 3.518e-65
Identity = 120/180 (66.67%), Postives = 142/180 (78.89%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GFA T+NGWVQSYGSRCVKPP++YGDV  P+ MTV W+S AQS++A+P+KGMLTGPVT+L WSFVR+DQPR  T  QIALA++ E  DLEKAGI +IQIDE ALREGLPL+  E A YLDWAV +F I   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE + S+ +LL  F
Sbjct:  502 LWGFAITSNGWVQSYGSRCVKPPLVYGDVYLPEPMTVGWASYAQSLSAKPVKGMLTGPVTMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF 681
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_SERP5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Serratia proteamaculans (strain 568) GN=metE PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 6.000e-65
Identity = 120/180 (66.67%), Postives = 140/180 (77.78%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GF FT NGWVQSYGSRCVKPP+I GD+SRP+A+TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEVEDLEKAGI +IQIDE ALREGLPLR+S+ A YL+WAV +F++     +D TQIHTHMCY  FNDI+ SI  +DADVITIE S SD  LL  F
Sbjct:  501 LDGFVFTQNGWVQSYGSRCVKPPVIIGDISRPEAITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVTREVIAKQIALALRDEVEDLEKAGIGIIQIDEPALREGLPLRQSDWAAYLNWAVDAFKLNAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMDLLEAF 680
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_SALRD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=metE PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 6.000e-65
Identity = 121/180 (67.22%), Postives = 137/180 (76.11%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GF FT NGWVQSYG+RCV+PPII GDVSRP+ MT  W S A   T  P+KGMLTGPVT+L WSFVR+DQ R ETC QIALAI+DEV DLE  GI  IQIDE A REGLPLR+ +   YLDWAV  FR+ + GV+D TQIHTHMCYS FNDII +I DMDADVI++E S S  +LL  F
Sbjct:  511 LDGFLFTENGWVQSYGTRCVRPPIIAGDVSRPEPMTTRWLSYANDQTDTPVKGMLTGPVTMLQWSFVRDDQSRAETCRQIALAIRDEVLDLEDVGIQAIQIDEPAFREGLPLREHQWDDYLDWAVECFRLASSGVRDETQIHTHMCYSEFNDIIEAIADMDADVISVEASRSKMELLDSF 690
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_ERWT9 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=metE PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 6.000e-65
Identity = 121/180 (67.22%), Postives = 139/180 (77.22%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GF FT NGWVQSYGSRCVKPP+I GDVSRP+A+TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEVEDLEKAGI +IQIDE ALREGLPL +S+   YL+WAV +FR+     QD TQIHTHMCY  FNDI+ SI  +DADVITIE S SD +LL  F
Sbjct:  499 LDGFIFTQNGWVQSYGSRCVKPPVIIGDVSRPEAITVNWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVEDLEKAGIGIIQIDEPALREGLPLHQSDWGAYLEWAVDAFRLNAAVAQDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESF 678
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_ACIF5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=metE PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 1.337e-64
Identity = 121/180 (67.22%), Postives = 138/180 (76.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L+GFAFT +GWVQSYGSR VKPP+I+GDVSRP  MTV WS  AQS+T RPMKGMLTGPVTIL WSFVR+DQPR  T  QIALAI+DEV DL  AGI +IQIDE A REGLPL++ +   YL+WA  +FRI+     D  QIHTHMCYS FNDI+ +I  MDADVITIE S S  +LL  F
Sbjct:  527 LAGFAFTRHGWVQSYGSRYVKPPLIFGDVSRPTPMTVAWSKYAQSLTQRPMKGMLTGPVTILQWSFVRDDQPRERTALQIALAIRDEVRDLIDAGIGIIQIDEPAYREGLPLKRKDWGHYLEWASRAFRISAQIAPDDVQIHTHMCYSEFNDILPAIAAMDADVITIETSRSQMELLDAF 706
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_ACIF2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=metE PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 1.337e-64
Identity = 121/180 (67.22%), Postives = 138/180 (76.67%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L+GFAFT +GWVQSYGSR VKPP+I+GDVSRP  MTV WS  AQS+T RPMKGMLTGPVTIL WSFVR+DQPR  T  QIALAI+DEV DL  AGI +IQIDE A REGLPL++ +   YL+WA  +FRI+     D  QIHTHMCYS FNDI+ +I  MDADVITIE S S  +LL  F
Sbjct:  527 LAGFAFTRHGWVQSYGSRYVKPPLIFGDVSRPTPMTVAWSKYAQSLTQRPMKGMLTGPVTILQWSFVRDDQPRERTALQIALAIRDEVRDLIDAGIGIIQIDEPAYREGLPLKRKDWGHYLEWASRAFRISAQIAPDDVQIHTHMCYSEFNDILPAIAAMDADVITIETSRSQMELLDAF 706
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_YERPS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pseudotuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 3.889e-64
Identity = 118/180 (65.56%), Postives = 139/180 (77.22%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GF FT NGWVQSYGSRCVKPP+I GD+SRP+A+TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEVEDLEKAGI +IQIDE ALREGLPLR+++   YL WAV +F++     Q+ TQIHTHMCY  FNDI+ SI  +DADVITIE S SD +LL  F
Sbjct:  501 LDGFVFTQNGWVQSYGSRCVKPPVIIGDISRPEAITVEWAKYAQSLTEKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVEDLEKAGIGIIQIDEPALREGLPLRRADWQAYLQWAVDAFKLNAAVAQNDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESF 680
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_YERPP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis (strain Pestoides F) GN=metE PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 3.889e-64
Identity = 118/180 (65.56%), Postives = 139/180 (77.22%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GF FT NGWVQSYGSRCVKPP+I GD+SRP+A+TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEVEDLEKAGI +IQIDE ALREGLPLR+++   YL WAV +F++     Q+ TQIHTHMCY  FNDI+ SI  +DADVITIE S SD +LL  F
Sbjct:  501 LDGFVFTQNGWVQSYGSRCVKPPVIIGDISRPEAITVEWAKYAQSLTEKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVEDLEKAGIGIIQIDEPALREGLPLRRADWQAYLQWAVDAFKLNAAVAQNDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESF 680
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_YERPN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=metE PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 3.889e-64
Identity = 118/180 (65.56%), Postives = 139/180 (77.22%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GF FT NGWVQSYGSRCVKPP+I GD+SRP+A+TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEVEDLEKAGI +IQIDE ALREGLPLR+++   YL WAV +F++     Q+ TQIHTHMCY  FNDI+ SI  +DADVITIE S SD +LL  F
Sbjct:  501 LDGFVFTQNGWVQSYGSRCVKPPVIIGDISRPEAITVEWAKYAQSLTEKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVEDLEKAGIGIIQIDEPALREGLPLRRADWQAYLQWAVDAFKLNAAVAQNDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESF 680
[Close]
BLAST of FC931664 vs. ExPASy Swiss-Prot
Match: METE_YERPE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis GN=metE PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 3.889e-64
Identity = 118/180 (65.56%), Postives = 139/180 (77.22%), Query Frame = 2 
Query:    2 LSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSHSDEKLLSVF 541
            L GF FT NGWVQSYGSRCVKPP+I GD+SRP+A+TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEVEDLEKAGI +IQIDE ALREGLPLR+++   YL WAV +F++     Q+ TQIHTHMCY  FNDI+ SI  +DADVITIE S SD +LL  F
Sbjct:  501 LDGFVFTQNGWVQSYGSRCVKPPVIIGDISRPEAITVEWAKYAQSLTEKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVEDLEKAGIGIIQIDEPALREGLPLRRADWQAYLQWAVDAFKLNAAVAQNDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESF 680
The following BLAST results are available for this feature:
BLAST of FC931664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
METE_BURM73.518e-6566.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SERP56.000e-6566.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALRD6.000e-6567.225-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ERWT96.000e-6567.225-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACIF51.337e-6467.225-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACIF21.337e-6467.225-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPS3.889e-6465.565-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPP3.889e-6465.565-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPN3.889e-6465.565-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPE3.889e-6465.565-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC34107F07EF PostHarvP1 Citrus clementina cDNA clone C34107F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931664 ID=FC931664; Name=FC931664; organism=Citrus clementina; type=EST; length=541bp
ATTATCAGGTTTCGCCTTCACTGCCAATGGGTGGGTGCAATCCTATGGAT
CTCGCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCGTCCCAAG
GCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACAGCTCGCCC
AATGAAAGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTG
TTAGAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCC
ATCAAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCA
AATTGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGC
ATGCTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGT
GGCGTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTT
CAACGACATTATCCACTCAATTATCGACATGGATGCTGATGTGATCACCA
TTGAGAACTCTCATTCTGATGAGAAGCTCCTGTCTGTCTTC
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