FC931667

Overview
NameFC931667
Unique NameFC931667
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931667 vs. ExPASy Swiss-Prot
Match: HTPG_BURM9 (Chaperone protein htpG OS=Burkholderia mallei (strain NCTC 10229) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.918e-26
Identity = 57/106 (53.77%), Postives = 81/106 (76.42%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            +T +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE+L + +  ++ P L I +  DK   +++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:    4 QTMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLS 109          
BLAST of FC931667 vs. ExPASy Swiss-Prot
Match: HTPG_BURM7 (Chaperone protein htpG OS=Burkholderia mallei (strain NCTC 10247) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.918e-26
Identity = 57/106 (53.77%), Postives = 81/106 (76.42%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            +T +FQAE+ QLL L+I++ YSNKEIFLREL+SN+SDA DK+RFE+L + +  ++ P L I +  DK   +++I D+GIGM++ + + NLGTIARSGTKEF   L+
Sbjct:    4 QTMSFQAEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFEALENNALYESDPNLRIRLSFDKAARTITIDDNGIGMSRDEAIANLGTIARSGTKEFFSKLS 109          
BLAST of FC931667 vs. ExPASy Swiss-Prot
Match: HTPG_PSEU2 (Chaperone protein htpG OS=Pseudomonas syringae pv. syringae (strain B728a) GN=htpG PE=3 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 3.812e-26
Identity = 57/113 (50.44%), Postives = 86/113 (76.11%), Query Frame = 3
Query:  111 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            +S+ ++ ET  FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA+DK+RFE+L+    L+   EL I +  DK   ++++ D+GIGM++ D++ +LGTIA+SGT +FM+ L+
Sbjct:    1 MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFEALSKPELLEGGAELKIRVSFDKDAKTVTLEDNGIGMSREDVITHLGTIAKSGTADFMKNLS 113          
BLAST of FC931667 vs. ExPASy Swiss-Prot
Match: HTPG_PSE14 (Chaperone protein htpG OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.812e-26
Identity = 57/113 (50.44%), Postives = 86/113 (76.11%), Query Frame = 3
Query:  111 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            +S+ ++ ET  FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA+DK+RFE+L+    L+   EL I +  DK   ++++ D+GIGM++ D++ +LGTIA+SGT +FM+ L+
Sbjct:    1 MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFEALSKPELLEGGAELKIRVSFDKDAKTVTLEDNGIGMSREDVITHLGTIAKSGTADFMKNLS 113          
BLAST of FC931667 vs. ExPASy Swiss-Prot
Match: HTPG_SHIDS (Chaperone protein htpG OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 4.978e-26
Identity = 56/107 (52.34%), Postives = 82/107 (76.64%), Query Frame = 3
Query:  132 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 452
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF SL++    +   EL + +  DK   +L+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:    5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRSLSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111          
BLAST of FC931667 vs. ExPASy Swiss-Prot
Match: HTPG_SHEDO (Chaperone protein htpG OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 4.978e-26
Identity = 56/113 (49.56%), Postives = 82/113 (72.57%), Query Frame = 3
Query:  123 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGAD 461
            S+ ET  FQ E+ QLL L+I++ YSNKEIFLREL+SN++DA DK+R+ +LTD +  +   EL + +  DK   +++I D+GIGMT+  ++ +LGTIA+SGTKEF   L+  A+
Sbjct:    2 SQQETHGFQTEVKQLLQLMIHSLYSNKEIFLRELVSNAADAADKLRYLALTDDALYEGDGELRVRVSTDKEKGTVTISDNGIGMTRDSVIEHLGTIAKSGTKEFFNNLSGEAN 114          
BLAST of FC931667 vs. ExPASy Swiss-Prot
Match: HTPG_ROSDO (Chaperone protein htpG OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 4.978e-26
Identity = 58/109 (53.21%), Postives = 78/109 (71.56%), Query Frame = 3
Query:  120 ASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 446
            AS  ETF+FQ E+ QLL ++  + YSN+EIFLREL+SN+SDA DK+R+E+LT+ S      E  I +  DK   +LS+ D+GIGM   DL++ LGTIARSGT  F++AL
Sbjct:    4 ASVKETFSFQTEVGQLLDIVAGSLYSNREIFLRELVSNASDACDKLRYEALTNPSLAQNADEFAISLAVDKKAKTLSVSDNGIGMNHGDLLDTLGTIARSGTGAFLDAL 112          
BLAST of FC931667 vs. ExPASy Swiss-Prot
Match: HTPG_PSESM (Chaperone protein htpG OS=Pseudomonas syringae pv. tomato GN=htpG PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 4.978e-26
Identity = 57/113 (50.44%), Postives = 86/113 (76.11%), Query Frame = 3
Query:  111 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            +S+ ++ ET  FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA+DK+RFE+L+    L+   EL I +  DK   ++++ D+GIGM++ D++ +LGTIA+SGT +FM+ L+
Sbjct:    1 MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFEALSRPELLEGGAELKIRVSFDKDAKTVTLEDNGIGMSREDVITHLGTIAKSGTADFMKNLS 113          
BLAST of FC931667 vs. ExPASy Swiss-Prot
Match: HTPG_PSEF5 (Chaperone protein htpG OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 4.978e-26
Identity = 57/112 (50.89%), Postives = 85/112 (75.89%), Query Frame = 3
Query:  111 VSMASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 446
            +S+ ++ ET  FQ E+ QLL L+I++ YSNKEIFLRELISN+SDA+DK+RFE+L+    L+   EL I +  DK   ++++ D+GIGM++ D++ +LGTIA+SGT +FM+ L
Sbjct:    1 MSVETQKETLGFQTEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFEALSKPELLEGGAELKIRVSFDKDAKTVTLEDNGIGMSREDVITHLGTIAKSGTADFMKNL 112          
BLAST of FC931667 vs. ExPASy Swiss-Prot
Match: HTPG_DESHY (Chaperone protein htpG OS=Desulfitobacterium hafniense (strain Y51) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 4.978e-26
Identity = 57/113 (50.44%), Postives = 82/113 (72.57%), Query Frame = 3
Query:  123 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGAD 461
            S+ ET  FQ EI QLL ++IN+ Y+++EIFLRELISN++DA +K+R+  L+ ++  D +  L I I PD+   +L+I D+GIGMTK DL+ N+GTIA SG+K F++ LA   D
Sbjct:    2 SQIETKEFQTEIRQLLDIVINSLYTDREIFLRELISNAADASEKVRYMQLSGQNVKDQELPLEIRITPDENAKTLTIADAGIGMTKEDLIENIGTIAHSGSKAFVQRLAEAGD 114          
The following BLAST results are available for this feature:
BLAST of FC931667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_BURM92.918e-2653.77Chaperone protein htpG OS=Burkholderia mallei (str... [more]
HTPG_BURM72.918e-2653.77Chaperone protein htpG OS=Burkholderia mallei (str... [more]
HTPG_PSEU23.812e-2650.44Chaperone protein htpG OS=Pseudomonas syringae pv.... [more]
HTPG_PSE143.812e-2650.44Chaperone protein htpG OS=Pseudomonas syringae pv.... [more]
HTPG_SHIDS4.978e-2652.34Chaperone protein htpG OS=Shigella dysenteriae ser... [more]
HTPG_SHEDO4.978e-2649.56Chaperone protein htpG OS=Shewanella denitrificans... [more]
HTPG_ROSDO4.978e-2653.21Chaperone protein htpG OS=Roseobacter denitrifican... [more]
HTPG_PSESM4.978e-2650.44Chaperone protein htpG OS=Pseudomonas syringae pv.... [more]
HTPG_PSEF54.978e-2650.89Chaperone protein htpG OS=Pseudomonas fluorescens ... [more]
HTPG_DESHY4.978e-2650.44Chaperone protein htpG OS=Desulfitobacterium hafni... [more]

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Properties
Property NameValue
Genbank descriptionC34107F10EF PostHarvP1 Citrus clementina cDNA clone C34107F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931667 ID=FC931667; Name=FC931667; organism=Citrus clementina; type=EST; length=467bp
GACTCACTAACTCTCTGCGTTTTTTTCTCTCTCTCTCTCTGTCTCTCGTT
CGCTTCCAAAACCCTTGTTTATAACTCAGAAGAGATCGTTTTTTGGTTGA
ACGGCAGGTCGTTTCGATGGCATCAGAGACAGAGACGTTTGCCTTTCAGG
CTGAGATCAACCAGTTGTTGAGTTTGATCATCAACACCTTTTACAGTAAC
AAGGAGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGA
TAAGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAAC
CAGAGCTTTTCATTCACATTATCCCTGATAAGACCAACAACTCATTGTCT
ATTATTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCT
TGGTACAATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTG
CTGGGGCGGATGTGAGC
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