FC931669

Overview
NameFC931669
Unique NameFC931669
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931669 vs. ExPASy Swiss-Prot
Match: EF1A_PODAN (Elongation factor 1-alpha OS=Podospora anserina GN=TEF PE=3 SV=1)

HSP 1 Score: 364.77 bits (935), Expect = 2.719e-100
Identity = 174/243 (71.60%), Postives = 204/243 (83.95%), Query Frame = 1
Query:    1 MIERSTNLDWYKG------------PTLLEALDQINQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDK 693
            M+E STN  WYKG             TLLEA+D I  PKRPTDKPLRLPLQDVYKIGGIGTVPVGR+ETG+LKPGM+VTF PS +TTEVKSVEMHHE L E +PGDNVGFNVKNVSVK+++RG VA +SK+DP  GA++F +QVI++NHPGQ+G GYAPVLDCHT+HIA KF+E+L KIDRR+GK +E+ PKF+K+GDA  VKM+P+KPM VE F+EYPPLGRFAVRDMRQTVAVGVIK V+K
Sbjct:  200 MLEASTNCPWYKGWEKEVKGGKATGKTLLEAIDSIEPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRIETGILKPGMVVTFAPSNVTTEVKSVEMHHEQLAEGVPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPMGAASFDAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFSELLQKIDRRTGKAVEESPKFIKSGDAAIVKMVPSKPMCVEAFTEYPPLGRFAVRDMRQTVAVGVIKKVEK 442          
BLAST of FC931669 vs. ExPASy Swiss-Prot
Match: EF1A_ABSGL (Elongation factor 1-alpha OS=Absidia glauca GN=TEF-1 PE=3 SV=1)

HSP 1 Score: 364.77 bits (935), Expect = 2.719e-100
Identity = 176/243 (72.43%), Postives = 208/243 (85.60%), Query Frame = 1
Query:    1 MIERSTNLDWYKG------------PTLLEALDQINQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDK 693
            M+E STN+ WYKG             TLL+A+D I+ P+RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+K GM+VTF P+ +TTEVKSVEMHHE L+E LPGDNVGFNVKNVSVKD++RG V S+SK+DPAK A +FT+QVI++NHPGQIG GYAPVLDCHT+HIA KFAE+L KIDRRSGK+LE  PKF+K+GD+  VKMIP+KPM VE +++YPPLGRFAVRDMRQTVAVGVIK+V+K
Sbjct:  199 MLEESTNMPWYKGWNKETKAGAKSGKTLLDAIDAIDPPQRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKAGMVVTFAPANVTTEVKSVEMHHEQLVEGLPGDNVGFNVKNVSVKDIRRGNVCSDSKNDPAKEAGSFTAQVIVLNHPGQIGAGYAPVLDCHTAHIACKFAELLEKIDRRSGKKLEDAPKFVKSGDSAIVKMIPSKPMCVEAYTDYPPLGRFAVRDMRQTVAVGVIKAVEK 441          
BLAST of FC931669 vs. ExPASy Swiss-Prot
Match: EF1A_ONCVO (Elongation factor 1-alpha OS=Onchocerca volvulus PE=2 SV=1)

HSP 1 Score: 363.999 bits (933), Expect = 4.637e-100
Identity = 178/243 (73.25%), Postives = 203/243 (83.54%), Query Frame = 1
Query:    1 MIERSTNLDWYKG------------PTLLEALDQINQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDK 693
            M+E S N+ W+KG             TLLEALD +  P+RPTDKPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMIVTF P  LTTEVKSVEMHHE+L EALPGDNVGFNVKN+S+KD++RG VAS+SK+DPAK    FT+QVIIMNHPGQI  GY PVLDCHT+HIA KFAE+  K+DRRSGK++E  PK LK+GDAG + +IPTKP+ VETF+EYPPLGRFAVRDMRQTVAVGVIK+VDK
Sbjct:  201 MLEPSANMPWFKGWSVERKEGTMTGKTLLEALDSVVPPQRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMIVTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKETKMFTAQVIIMNHPGQISAGYTPVLDCHTAHIACKFAELKEKVDRRSGKKVEDNPKSLKSGDAGIIDLIPTKPLCVETFTEYPPLGRFAVRDMRQTVAVGVIKNVDK 443          
BLAST of FC931669 vs. ExPASy Swiss-Prot
Match: EF1A2_XENLA (Elongation factor 1-alpha, oocyte form OS=Xenopus laevis GN=eef1ao PE=1 SV=1)

HSP 1 Score: 363.229 bits (931), Expect = 7.910e-100
Identity = 182/244 (74.59%), Postives = 205/244 (84.02%), Query Frame = 1
Query:    1 MIERSTNLDWYKG------------PTLLEALDQINQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKR 696
            M+E STN+ W+KG             TLLEALD I  P+RPT KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTF PS +TTEVKSVEMHHE+L EALPGDNVGFNVKN+SVKD++RG VA +SK+DP   A +FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE +PKFLK+GDA  V+MIP KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK VDK+
Sbjct:  201 MLEASTNMPWFKGWKIERKEGNASGVTLLEALDCIIPPQRPTAKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQAGSFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKQKIDRRSGKKLEDDPKFLKSGDAAIVEMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKGVDKK 444          
BLAST of FC931669 vs. ExPASy Swiss-Prot
Match: EF1A_TRIRE (Elongation factor 1-alpha OS=Trichoderma reesei GN=tef1 PE=3 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 1.033e-99
Identity = 176/243 (72.43%), Postives = 202/243 (83.13%), Query Frame = 1
Query:    1 MIERSTNLDWYKG------------PTLLEALDQINQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDK 693
            M+  STN  WYKG             TLLEA+D I  PKRPTDKPLRLPLQDVYKIGGIGTVPVGR+ETGVLKPGM+VTF PS +TTEVKSVEMHHE L E  PGDNVGFNVKNVSVK+++RG VA +SK+DP  GA++FT+QVI+MNHPGQ+G GYAPVLDCHT+HIA KFAE+L KIDRR+GK  E  PKF+K+GD+  VKMIP+KPM VE F++YPPLGRFAVRDMRQTVAVGVIK+V+K
Sbjct:  200 MLTPSTNCPWYKGWEKETKAGKFTGKTLLEAIDSIEPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRIETGVLKPGMVVTFAPSNVTTEVKSVEMHHEQLAEGQPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPMGAASFTAQVIVMNHPGQVGAGYAPVLDCHTAHIACKFAELLEKIDRRTGKATESAPKFIKSGDSAIVKMIPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKAVEK 442          
BLAST of FC931669 vs. ExPASy Swiss-Prot
Match: EF1A_STYLE (Elongation factor 1-alpha OS=Stylonychia lemnae GN=EFAA PE=3 SV=1)

HSP 1 Score: 362.459 bits (929), Expect = 1.349e-99
Identity = 170/232 (73.28%), Postives = 203/232 (87.50%), Query Frame = 1
Query:    1 MIERSTNLDWYKGPTLLEALDQINQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKR 696
            M+E+S N+ W+ G TL++ALD ++QPKRP DKPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGM++TF P  +TTE KSVEMHHESL EA PGDNVGF VKN+SVKDL+RGYVAS+SK+DPAK  +NF +QVI++NHPGQI  GYAPVLDCHT+HIA KF EI +K+DRRSGK LE+EPKF+K+G+A  V+M+P KPM VE F++YPPLGRFAVRDM+QTVAVGVIK V K+
Sbjct:  201 MLEKSPNMPWFTGSTLIDALDALDQPKRPKDKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVLTFAPMNITTECKSVEMHHESLTEAEPGDNVGFTVKNLSVKDLRRGYVASDSKNDPAKDTTNFLAQVIVLNHPGQIQKGYAPVLDCHTAHIACKFDEIESKVDRRSGKVLEEEPKFIKSGEAALVRMVPQKPMCVEAFNQYPPLGRFAVRDMKQTVAVGVIKEVVKK 432          
BLAST of FC931669 vs. ExPASy Swiss-Prot
Match: EF1A_SCHCO (Elongation factor 1-alpha OS=Schizophyllum commune GN=TEF1 PE=3 SV=1)

HSP 1 Score: 362.073 bits (928), Expect = 1.762e-99
Identity = 175/243 (72.02%), Postives = 205/243 (84.36%), Query Frame = 1
Query:    1 MIERSTNLDWYKG------------PTLLEALDQINQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDK 693
            M+E STN+ WYKG             TLL+A+D I  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++K GM+VTF PS +TTEVKSVEMHHE L E  PGDNVGFNVKNVSVKD++RG VAS+SK+DPAK A++F +QVI++NHPGQIG GYAPVLDCHT+HIA KFAE+L KIDRR+GK LE  PKF+K+GDA  VK++P+KPM VE+++EYPPLGRFAVRDMRQTVAVG+IKSVDK
Sbjct:  199 MLEESTNMPWYKGWTKETKAGVVKGKTLLDAIDAIEPPVRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGIIKAGMVVTFAPSNVTTEVKSVEMHHEQLAEGKPGDNVGFNVKNVSVKDIRRGNVASDSKNDPAKEAASFNAQVIVLNHPGQIGAGYAPVLDCHTAHIACKFAELLEKIDRRTGKSLEASPKFVKSGDACIVKLVPSKPMCVESYNEYPPLGRFAVRDMRQTVAVGIIKSVDK 441          
BLAST of FC931669 vs. ExPASy Swiss-Prot
Match: EF1A_ORYLA (Elongation factor 1-alpha OS=Oryzias latipes GN=eef1a PE=2 SV=1)

HSP 1 Score: 362.073 bits (928), Expect = 1.762e-99
Identity = 178/244 (72.95%), Postives = 202/244 (82.79%), Query Frame = 1
Query:    1 MIERSTNLDWYKG------------PTLLEALDQINQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKR 696
            M+E S  + W+KG             TLLEALD I  P RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM+VTF P  LTTEVKSVEMHHESL EA+PGDNVGFN+KNVSVK+++RGYVA +SK+DP K A++F +QVII+NHPGQI  GYAPVLDCHT+HIA KF E++ KIDRRSGK+LE  PKF+K+GDA  VK+IP KPMVVE FS YPPLGRFAVRDMRQTVAVGVIK+VD +
Sbjct:  201 MLEASDKMSWFKGWKIERKDGNASGTTLLEALDAILPPSRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPPNLTTEVKSVEMHHESLPEAVPGDNVGFNIKNVSVKEIRRGYVAGDSKNDPPKAAASFNAQVIILNHPGQINQGYAPVLDCHTAHIACKFNELIEKIDRRSGKKLEDNPKFVKSGDAAIVKLIPQKPMVVEPFSNYPPLGRFAVRDMRQTVAVGVIKAVDTK 444          
BLAST of FC931669 vs. ExPASy Swiss-Prot
Match: EF1AC_PORPU (Elongation factor 1-alpha C OS=Porphyra purpurea GN=TEF-C PE=2 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 3.006e-99
Identity = 171/223 (76.68%), Postives = 197/223 (88.34%), Query Frame = 1
Query:   28 WYKGPTLLEALDQINQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKR 696
            WYKGP LLEALD  + PKRP DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTF PSGL+TEVKSVEMHHE+L +A PGDNVGFNVKNVSVKDLKRGYV  +SK+DP KG ++F +QVII+NHPG+I  GYAPVLDCHT+HIA KF+E++ K+DRRSGK+LE  PK +K+GDA  VKM+ +KPM VE F+ YPPLGRFAVRDMRQTVAVGVIKSV+K+
Sbjct:  214 WYKGPCLLEALDACDPPKRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPSGLSTEVKSVEMHHEALTQAGPGDNVGFNVKNVSVKDLKRGYVCGDSKNDPPKGCASFNAQVIILNHPGEIHAGYAPVLDCHTAHIACKFSELILKMDRRSGKKLEDSPKMIKSGDAAMVKMVASKPMCVEAFTSYPPLGRFAVRDMRQTVAVGVIKSVEKK 436          
BLAST of FC931669 vs. ExPASy Swiss-Prot
Match: EF1A_ARXAD (Elongation factor 1-alpha OS=Arxula adeninivorans GN=TEF PE=3 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 5.127e-99
Identity = 175/243 (72.02%), Postives = 203/243 (83.54%), Query Frame = 1
Query:    1 MIERSTNLDWYKG------------PTLLEALDQINQPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDK 693
            MIE +TN  WYKG             TLLEA+D ++ P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTF P+G+TTEVKSVEMHHE L E LPGDNVGFNVKNVSVK+++RG VA +SK+DP KG  +FT+QVII NHPGQI  GY+PVLDCHT+HIA +F E++ KIDRRSGK++E  PKF+K GDA  V+MIP+KPM VETF+EYPPLGRFAVRDMRQTVAVGVIKSV+K
Sbjct:  199 MIEATTNASWYKGWHKETKEGKATGKTLLEAIDAVDPPTRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPAGVTTEVKSVEMHHEQLPEGLPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPKGCDSFTAQVIIFNHPGQISAGYSPVLDCHTAHIACRFDELIEKIDRRSGKKVEDSPKFVKAGDAAIVRMIPSKPMCVETFTEYPPLGRFAVRDMRQTVAVGVIKSVEK 441          
The following BLAST results are available for this feature:
BLAST of FC931669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_PODAN2.719e-10071.60Elongation factor 1-alpha OS=Podospora anserina GN... [more]
EF1A_ABSGL2.719e-10072.43Elongation factor 1-alpha OS=Absidia glauca GN=TEF... [more]
EF1A_ONCVO4.637e-10073.25Elongation factor 1-alpha OS=Onchocerca volvulus P... [more]
EF1A2_XENLA7.910e-10074.59Elongation factor 1-alpha, oocyte form OS=Xenopus ... [more]
EF1A_TRIRE1.033e-9972.43Elongation factor 1-alpha OS=Trichoderma reesei GN... [more]
EF1A_STYLE1.349e-9973.28Elongation factor 1-alpha OS=Stylonychia lemnae GN... [more]
EF1A_SCHCO1.762e-9972.02Elongation factor 1-alpha OS=Schizophyllum commune... [more]
EF1A_ORYLA1.762e-9972.95Elongation factor 1-alpha OS=Oryzias latipes GN=ee... [more]
EF1AC_PORPU3.006e-9976.68Elongation factor 1-alpha C OS=Porphyra purpurea G... [more]
EF1A_ARXAD5.127e-9972.02Elongation factor 1-alpha OS=Arxula adeninivorans ... [more]

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Properties
Property NameValue
Genbank descriptionC34107F12EF PostHarvP1 Citrus clementina cDNA clone C34107F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931669 ID=FC931669; Name=FC931669; organism=Citrus clementina; type=EST; length=728bp
ATGATTGAGAGGTCCACAAACCTTGACTGGTACAAGGGCCCAACCCTTCT
TGAAGCTCTTGACCAGATCAATCAACCCAAGAGACCAACAGACAAGCCTC
TCCGTCTCCCCCTTCAGGATGTCTACAAGATTGGTGGTATTGGAACTGTC
CCTGTTGGCCGTGTTGAAACTGGTGTACTCAAGCCCGGTATGATAGTCAC
ATTCGGTCCATCTGGATTGACTACTGAAGTTAAGTCAGTTGAGATGCACC
ATGAGTCTCTCCTGGAGGCACTTCCTGGTGATAATGTGGGGTTCAACGTT
AAGAATGTTTCAGTGAAGGATCTTAAGCGTGGTTACGTTGCATCTAACTC
CAAGGATGATCCCGCCAAGGGGGCATCCAACTTCACCTCCCAAGTTATCA
TCATGAACCACCCTGGCCAGATTGGAAACGGTTATGCACCTGTTCTTGAT
TGCCACACTTCCCACATTGCTGTCAAGTTTGCTGAAATCTTGACCAAGAT
TGACAGGCGATCTGGTAAGGAGCTGGAGAAGGAGCCCAAATTCTTAAAGA
ATGGTGATGCTGGGTTTGTTAAGATGATTCCCACCAAGCCTATGGTTGTG
GAAACTTTCTCCGAATATCCCCCACTTGGTCGTTTTGCTGTGAGAGACAT
GCGCCAGACTGTCGCTGTTGGAGTCATCAAGAGCGTGGACAAGAGGATCC
ATCTGGAGCCAAGTAACCAGTCTGCTGC
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