FC931670
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931670 vs. ExPASy Swiss-Prot
Match: RLA0_TRYCR (60S acidic ribosomal protein P0 OS=Trypanosoma cruzi PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.651e-30 Identity = 79/216 (36.57%), Postives = 117/216 (54.17%), Query Frame = 1 Query: 64 MGGKSATKTAYFEKLRTLLNEYSTIFIVGVDNVSSQQMHEIRMALRGEAVVLMGKNTMVRRALKGFVTENPE--WERLLPH-------VRGNVGFIFTKGDLKATKEKILXXXXXXXXXXXXXXXDDVWVPAGNTGMEPGKTAFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTITQVYENGQCFSADVLDITDE 684 M S K Y E+ L +Y + +DNV SQQ+H++R LRG ++MGK T+ ++ ++ + +++LL + + GN IFT ++ + DV VPAGNTGMEP T+FFQAL + TKIA+GT+EIVSD K++ G++V S ATLL L+ISPF Y + + V++ G F + L ITD+ Sbjct: 1 MPSVSEAKREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRAEDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQSVWDRGMLFLREDLSITDD 216
BLAST of FC931670 vs. ExPASy Swiss-Prot
Match: RLA0_LEIIN (60S acidic ribosomal protein P0 OS=Leishmania infantum GN=LIPO-A PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.192e-30 Identity = 79/218 (36.24%), Postives = 118/218 (54.13%), Query Frame = 1 Query: 76 SATKTAYFEKLRTLLNEYSTIFIVGVDNVSSQQMHEIRMALRGEAVVLMGKNTMVRRAL-------------KGFVTENPEWERLLPHVRGNVGFIFTKGDLKATKEKILXXXXXXXXXXXXXXXDDVWVPAGNTGMEPGKTAFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTITQVYENGQCFSADVLDITDEQL 690 + K Y E+L L +YS + VG+DNV SQQ+H++ ALR +A +MGK T+ + + K F + E+ L GN G IFT ++ + DV V AG+TGMEP +T+FFQAL + TKIA+G +EIV++ K++ G+KV S ATLL LNISPF Y + + V++ G F+ + L +T++ + Sbjct: 5 TTAKREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVGRALRAKAEFMMGKKTLQGKIVEKRAQAKDASPEAKHFNDQCEEYNLL----SGNTGLIFTNNAVQEITSVLDAHRVKRAARVGAISPCDVIVAAGSTGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNSTATLLQKLNISPFYYQVNVLSVWDRGVLFTREDLMMTEDMV 218
BLAST of FC931670 vs. ExPASy Swiss-Prot
Match: YL339_YEAST (Putative uncharacterized protein YLR339C OS=Saccharomyces cerevisiae GN=YLR339C PE=5 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.032e-29 Identity = 76/152 (50.00%), Postives = 89/152 (58.55%), Query Frame = -3 Query: 57 MVPRAILVGTPRAWKKAVLPGSIPVLPAGTQXXXXXXXXXXXXXXXXXXRIFSLVALRSPLVKMKPTLPRTWGRRRSHSGFSVTKPLRARRTMVFLPIRTTASPRRAIRISCIC*ELTLSTPTMKMVLYSLRRVRSFSK*AVLVADLPPISS 512 MVP AILVGTP+AWKK VLPGSIPVL A TQ I L+++ LVK KPTLP T G S SG S KPL A TMVFLPI+TTA P + SCIC E TLSTPT LYS + + +K + + +PPIS+ Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGSLVKTKPTLPLTKGNNFSKSGKSDKKPLMALLTMVFLPIKTTALPLNSFLTSCICWEETLSTPTTNKDLYSSKYSLNLAKYSAFFSRMPPISN 152
BLAST of FC931670 vs. ExPASy Swiss-Prot
Match: RLA0_THEON (Acidic ribosomal protein P0 homolog OS=Thermococcus onnurineus (strain NA1) GN=rplP0 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.072e-21 Identity = 59/201 (29.35%), Postives = 104/201 (51.74%), Query Frame = 1 Query: 100 EKLRTLLNEYSTIFIVGVDNVSSQQMHEIRMALRGEAVVLMGKNTMVRRALKGFVTE--NPEWERLLPHVRGNVGFIFTKGDLKATKEKILXXXXXXXXXXXXXXXDDVWVPAGNTGMEPGK-TAFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTITQVYENGQCFSADVLDITDEQLL 693 E+L ++ Y I +V V NV + + ++R LRG+A++ + +NT++ A+K E PE E+L+ H++G G + T+ + + + DV +PAG T + PG QALG+P +I +G + I D +++AG + A +LN L I P G+ + YE+G ++ +VL I +E+ + Sbjct: 13 EELTNIIKSYPVIALVDVANVPAYPLSKMREKLRGKALLRVSRNTLIELAIKRAAQELGKPELEKLIDHIQGGAGILATEMNPFKLYKLLEESKTPAPAKPGVPVPRDVVIPAGPTSISPGPLVGEMQALGIPARIEKGKVSIQKDYTVLKAGEVITEQLARILNALGIEPLEVGLNLLAAYEDGIVYTPEVLAIDEEEYI 213
BLAST of FC931670 vs. ExPASy Swiss-Prot
Match: RLA0_METS3 (Acidic ribosomal protein P0 homolog OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rplP0 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.120e-21 Identity = 61/199 (30.65%), Postives = 106/199 (53.27%), Query Frame = 1 Query: 103 KLRTLLNEYSTIFIVGVDNVSSQQMHEIRMALRGEAVVLMGKNTMVRRALKGFVTENPEWERLLPHVRGNVGFIFTKGDLKATKEKILXXXXXXXXXXXXXXXDDVWVPAGNTGMEPGK-TAFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTITQVYENGQCFSADVLDITDEQLLA 696 +L++L+++Y I IV + N+ ++Q+ E+R +L +AV+ M K ++ AL+ L H+ G V I T+ + + + DD+ +P G+TG EPG Q +G+P KI +G I + + LVEAG +V A+ A+ L+ ++I+P G+ + VYE ++++VL I +EQ LA Sbjct: 14 ELKSLIDKYDVIGIVDLLNIPAKQLQEMRKSLHNKAVIRMSKKNLIDLALEDCNASKNNIVDLSEHMEGQVAVIATEMNPFKLYKILEDSKTSAPAKPGAIATDDIVIPEGDTGFEPGPFLGELQQVGIPAKIDKGKIVVSKETVLVEAGEEVSAAVASTLSRMDINPMEVGIDLRAVYEEEAIYTSEVLAIDEEQTLA 212
BLAST of FC931670 vs. ExPASy Swiss-Prot
Match: RLA0_THESM (Acidic ribosomal protein P0 homolog OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rplP0 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.078e-21 Identity = 62/202 (30.69%), Postives = 105/202 (51.98%), Query Frame = 1 Query: 100 EKLRTLLNEYSTIFIVGVDNVSSQQMHEIRMALRGEAVVLMGKNTMVRRALKGFVTE--NPEWERLLPHVRGNVGFIFTKGDLKATKEKILXXXXXXXXXXXXXXXDDVWVPAGNTGMEPGK-TAFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTITQVYENGQCFSADVLDITDEQLLA 696 E+L LL +Y I +V V +V + + ++R +LR +AV+ + +NT++ ALK E + E+L+ H++G G + TK + + + DV VPAG T + PG QALG+P +I +G + I D +++AG + A +LN L I P G+ + YE+G ++ +VL I +EQ ++ Sbjct: 13 EELTKLLQDYPVIALVDVADVPAYPLSKMRESLRDKAVLRVSRNTLIELALKKAAQELNDSNLEKLIEHIQGGTGILVTKINPFKLYKFLEESKKPAPAKAGAPAPRDVVVPAGPTPLSPGPLVGEMQALGIPARIEKGKVSIQKDTVVLKAGEIITPQLANILNQLGIEPLEVGLKLLAAYEHGIVYTPEVLAIDEEQYIS 214
BLAST of FC931670 vs. ExPASy Swiss-Prot
Match: RLA0_PYRKO (Acidic ribosomal protein P0 homolog OS=Pyrococcus kodakaraensis GN=rplP0 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.450e-20 Identity = 57/201 (28.36%), Postives = 101/201 (50.25%), Query Frame = 1 Query: 100 EKLRTLLNEYSTIFIVGVDNVSSQQMHEIRMALRGEAVVLMGKNTMVRRALKGFVTE--NPEWERLLPHVRGNVGFIFTKGDLKATKEKILXXXXXXXXXXXXXXXDDVWVPAGNTGMEPGK-TAFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTITQVYENGQCFSADVLDITDEQLL 693 E+L ++ Y I +V V V + + ++R LRG+A++ + +NT++ A+K E PE E+L+ H++G + T+ + + + DV +PAG T + PG QALG+P +I +G + I D +++AG + A +LN L I P G+ + YE+G ++ DVL I + + + Sbjct: 13 EELANIIKSYPVIALVDVAGVPAYPLSKMRDKLRGKALLRVSRNTLIELAIKRAAQELGQPELEKLIDHIQGGAAILATEMNPFKLYKLLEESKTPAPAKAGAVVPKDVVIPAGPTSLAPGPLVGEMQALGIPARIEKGKVSIQKDYTVLKAGEVITEQLARILNALGIEPLEVGLNLLAAYEDGIVYTPDVLAIDESEYI 213
BLAST of FC931670 vs. ExPASy Swiss-Prot
Match: RLA0_METKA (Acidic ribosomal protein P0 homolog OS=Methanopyrus kandleri GN=rplP0 PE=3 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19 Identity = 60/194 (30.93%), Postives = 96/194 (49.48%), Query Frame = 1 Query: 100 EKLRTLLNEYSTIFIVGVDNVSSQQMHEIRMALRG-EAVVLMGKNTMVRRALKGFVTENPEWERLLPHVRGNVGFIFTKGDLKATKEKILXXXXXXXXXXXXXXXDDVWVPAGNTGMEPGK-TAFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTITQVYENGQCFSADVLDI 675 ++L+ L++EY + +V ++ + + Q+ EIR LR + ++ M +NT++R AL+ + E PE E LL ++ G V FIFT D + + +D+ VP G T EPG + Q G+P +I G + I D LV+ G ++ A +L L I P G+ I + G F D L I Sbjct: 26 KELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNTLMRIALEEKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVVPEGPTPFEPGPIVSELQQAGLPAQIQDGKVVITKDTVLVKEGEEIDEKTAEILKKLEIEPMEVGVDIVAIVAEGTLFERDDLAI 219
BLAST of FC931670 vs. ExPASy Swiss-Prot
Match: RLA0_METTL (Acidic ribosomal protein P0 homolog OS=Methanococcus thermolithotrophicus GN=rplP0 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.893e-18 Identity = 59/200 (29.50%), Postives = 98/200 (49.00%), Query Frame = 1 Query: 103 KLRTLLNEYSTIFIVGVDNVSSQQMHEIRMALRGEAVVLMGKNTMVRRALKGFVTE--NPEWERLLPHVRGNVGFIFTKGDLKATKEKILXXXXXXXXXXXXXXXDDVWVPAGNTGMEPGK-TAFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTITQVYENGQCFSADVLDITDEQLL 693 KL+ LL + +V + V ++Q+ EIR +RG + M +NT++ RA+K E NPE+ +L ++ I T + + + D+ V AG+TGM PG +++G+P I +G I I D + +AG V A +L+ L I P T G+ + YE+G ++ DVL I +E+ + Sbjct: 20 KLKELLKNGQIVALVDMMEVPARQLQEIRDKIRGTMTLKMSRNTLIERAIKEVAEETGNPEFAKLADYIDKGAAIITTDMNPFKLYKTLEESKSPAPIKGGAVAPCDIEVKAGSTGMPPGPFLGELKSVGIPAAIEKGKIGIKEDKVVAKAGEVVSHKLAVVLSALGIKPVTVGLNLLAAYEDGVIYTPDVLKIDEEEFV 219
BLAST of FC931670 vs. ExPASy Swiss-Prot
Match: RLA0_METTH (Acidic ribosomal protein P0 homolog OS=Methanobacterium thermoautotrophicum GN=rplP0 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.893e-18 Identity = 56/200 (28.00%), Postives = 99/200 (49.50%), Query Frame = 1 Query: 100 EKLRTLLNEYSTIFIVGVDNVSSQQMHEIRMALRGEAVVLMGKNTMVRRALKGFVTENPEWERLLPHVRGNVGFIFTKGDLKATKEKILXXXXXXXXXXXXXXXDDVWVPAGNTGMEPGKT-AFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTITQVYENGQCFSADVLDITDEQLLA 696 ++L L+ Y + I + ++ ++Q+ ++R LR A++ M K T++ AL+ E + L ++ G IFT + + + DD+ VP G+TG PG Q +G+P KI +G I + +D +V+AG ++ A +L L+I P G+ + YEN ++ADVL I +E+ L+ Sbjct: 13 QELHDLIKGYEVVGIANLADIPARQLQKMRQTLRDSALIRMSKKTLISLALEKAGRELENVDSLSDYMEGQPALIFTDMNPFKLFKILEDSKTPAPAKPGAIAPDDIVVPKGDTGFAPGPILGELQQIGIPAKIEKGKIVVSNDHVVVKAGEEIPPKVAGILTRLDIQPLEVGIDLRAAYENQTVYTADVLTIDEEKTLS 212 The following BLAST results are available for this feature:
BLAST of FC931670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931670 ID=FC931670; Name=FC931670; organism=Citrus clementina; type=EST; length=703bpback to top |