FC931673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.866e-33 Identity = 70/177 (39.55%), Postives = 109/177 (61.58%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEE-----KLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGE-KDK-DTTYTQACLTIKKQYQDMKTRIELAIAKGSISKETG 691 W+ + + +F+L WI+ Q +W + + DRLS+R E KL VD+FV T DP+ EPP + +T+LS+++ +YP K+S Y+SDD S F L E S F++ W+PFCKK++VEPR+PE +F++K+ KDK TT+ + +K++Y++ K RI +AK E G Sbjct: 244 WLISVICEIWFALSWILDQFPKWFPINRETYLDRLSMRFERDGEKNKLAPVDVFVSTVDPLKEPPIITANTILSILAVDYPVNKVSCYVSDDGASMLLFDTLSETSEFARRWVPFCKKYNVEPRAPEFYFSEKIDYLKDKVQTTFVKDRRAMKREYEEFKVRINALVAKAQKKPEEG 420
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 4.889e-33 Identity = 73/201 (36.32%), Postives = 119/201 (59.20%), Query Frame = 2 Query: 110 ICLILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK-----LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGE-KDK-DTTYTQACLTIKKQYQDMKTRIELAIAKGSISKETG 691 +CL L YR+ N W+ + + +F+L WI+ Q +W + + DRL+LR++ + L VDIFV T DP+ EPP + +TVLS+++ +YP +K+S Y+SDD + +F +L E S F++ W+PFCKK+ +EPR+PE +FA K+ KDK T++ + +K++Y++ K RI ++K E G Sbjct: 269 LCLFLHYRITNPVPNAFA-----LWLVSVICEIWFALSWILDQFPKWFPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLAETSEFARKWVPFCKKYSIEPRAPEWYFAAKIDYLKDKVQTSFVKDRRAMKREYEEFKIRINALVSKALKCPEEG 464
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.385e-33 Identity = 67/177 (37.85%), Postives = 112/177 (63.28%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEE-----KLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGE-KDK-DTTYTQACLTIKKQYQDMKTRIELAIAKGSISKETG 691 W+ + + +F+ W++ Q +W + F DRL+LR++ +L VD+FV T DP+ EPP + +TVLS+++ +YP +K++ Y+SDD + TF AL E + FSK W+PFCKKF++EPR+PE +F++K+ KDK ++ + +K++Y++ K RI + +AK E G Sbjct: 291 WLTSVICEIWFAFSWLLDQFPKWYPINRETFLDRLALRYDRDGEPSQLAPVDVFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVACYVSDDGSAMLTFEALSETAEFSKKWVPFCKKFNIEPRAPEFYFSQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINILVAKAQKIPEDG 467
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.089e-32 Identity = 74/193 (38.34%), Postives = 116/193 (60.10%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK-----LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGE-KDK-DTTYTQACLTIKKQYQDMKTRIELAIAK-------GSISKE----TGNHTGD 706 W+ + + +F++ WI+ Q +W + DRLSLR+E + L VD+FV T DP+ EPP + +TVLS+++ +YP +K+S Y+SDD S TF +L E + F++ W+PFCKKF +EPR+PE +F++K+ KDK + Q +K++Y++ K RI +AK G I K+ GN+T D Sbjct: 296 WLTSIICEIWFAVSWILDQFPKWYPIDRETYLDRLSLRYEREGEPSLLSAVDLFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEFYFSQKVDYLKDKVHPNFVQERRAMKREYEEFKVRINALVAKAQKVPAEGWIMKDGTPWPGNNTRD 488
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.089e-32 Identity = 74/193 (38.34%), Postives = 116/193 (60.10%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK-----LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGE-KDK-DTTYTQACLTIKKQYQDMKTRIELAIAK-------GSISKE----TGNHTGD 706 W+ + + +F++ WI+ Q +W + DRLSLR+E + L VD+FV T DP+ EPP + +TVLS+++ +YP +K+S Y+SDD S TF +L E + F++ W+PFCKKF +EPR+PE +F++K+ KDK + Q +K++Y++ K RI +AK G I K+ GN+T D Sbjct: 296 WLTSIICEIWFAVSWILDQFPKWYPIDRETYLDRLSLRYEREGEPSLLSAVDLFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEFYFSQKVDYLKDKVHPNFVQERRAMKREYEEFKVRINALVAKAQKVPAEGWIMKDGTPWPGNNTRD 488
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.422e-32 Identity = 67/177 (37.85%), Postives = 108/177 (61.02%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEE-----KLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGE-KDK-DTTYTQACLTIKKQYQDMKTRIELAIAKGSISKETG 691 W+ + + +F+L WI+ Q +WS + DRL+LR+E +L +D FV T DP+ EPP + +TVLS+++ +YP +++S Y+SDD S F L E + F++ W+PFCKKF +EPR+PE +F++K+ KDK T+ + +K++Y++ K RI +AK E G Sbjct: 242 WLASVICELWFALSWILDQLPKWSPVTRETYLDRLALRYERDGEPCRLAPIDFFVSTVDPLKEPPIITANTVLSILAVDYPVDRVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKFTIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEG 418
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.169e-32 Identity = 70/201 (34.83%), Postives = 118/201 (58.71%), Query Frame = 2 Query: 110 ICLILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEE-----KLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGE-KDK-DTTYTQACLTIKKQYQDMKTRIELAIAKGSISKETG 691 +C L YR + K W+ + + +F+ W++ Q +W + + DRL++R++ +L VD+FV T DP+ EPP + +TVLS++S +YP +K++ Y+SDD + TF +L E + F+K W+PFCKKF++EPR+PE +FA+K+ KDK ++ + +K++Y++ K RI +AK E G Sbjct: 285 LCFFLQYRTTHPVKNAYP-----LWLTSVICEIWFAFSWLLDQFPKWYPINRETYLDRLAIRYDRDGEPSQLVPVDVFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVACYVSDDGSAMLTFESLSETAEFAKKWVPFCKKFNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEG 480
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.139e-32 Identity = 71/177 (40.11%), Postives = 107/177 (60.45%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK-----LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGE-KDK-DTTYTQACLTIKKQYQDMKTRIELAIAKGSISKETG 691 W+ + + +F++ WI+ Q +W + DRLSLR +++ L VD FV T DP EPP + +TVLS++S +YP EK+S Y+SDD + TF AL E S F+K W+PFCKKF++EPR+PE +F +K+ KDK ++ + +K+ Y++ K RI +AK E G Sbjct: 308 WLISVICEIWFAMSWILDQFPKWLPIERETYLDRLSLRFDKEGQPSQLAPVDFFVSTVDPSKEPPLVTANTVLSILSVDYPVEKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKFNIEPRAPEWYFQQKIDYLKDKVAASFVRERRAMKRDYEEFKVRINALVAKAQKVPEEG 484
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.059e-32 Identity = 65/177 (36.72%), Postives = 111/177 (62.71%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK-----LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGE-KDK-DTTYTQACLTIKKQYQDMKTRIELAIAKGSISKETG 691 W+ + + +F+L W++ Q +W + + DRL+LR++ + L +D+FV T DP+ EPP + +TVLS+++ +YP +K+S Y+SDD + TF AL E + F++ W+PFCKK ++EPR+PE +FA+K+ KDK ++ + +K++Y++ K RI +AK E G Sbjct: 301 WLVSVICEIWFALSWLLDQFPKWYPINRETYLDRLALRYDREGEPSQLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKVPEEG 477
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.059e-32 Identity = 65/177 (36.72%), Postives = 111/177 (62.71%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK-----LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGE-KDK-DTTYTQACLTIKKQYQDMKTRIELAIAKGSISKETG 691 W+ + + +F+L W++ Q +W + + DRL+LR++ + L +D+FV T DP+ EPP + +TVLS+++ +YP +K+S Y+SDD + TF AL E + F++ W+PFCKK ++EPR+PE +FA+K+ KDK ++ + +K++Y++ K RI +AK E G Sbjct: 301 WLVSVICEIWFALSWLLDQFPKWYPINRETYLDRLALRYDREGEPSQLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKVPEEG 477 The following BLAST results are available for this feature:
BLAST of FC931673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931673 ID=FC931673; Name=FC931673; organism=Citrus clementina; type=EST; length=727bpback to top |