FC931673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.573e-31 Identity = 69/200 (34.50%), Postives = 123/200 (61.50%), Query Frame = 2 Query: 68 RVSHKVFAATC----FVGICL-ILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGEKDKDTTYTQACLTIKKQYQDMKTRIE 652 R+SHK + +G+ L +L+YR+++ +++ WI F+ + F+ W++ +++WS + + +RL R E LP VD+FV TADP+ EPP +V++TVLS+++ NYP KL+ Y+SDD S T+++L EAS F+K W+PFCKK++V R+P +F + E + + +++ K++Y+ + ++E Sbjct: 14 RISHKSYFLRAVDLTILGLLLSLLLYRILHVNQKDT------VWIVAFLCETCFTFVWLLITNIKWSPADYKTYPERLDERVHE-LPPVDMFVTTADPVREPPLIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRAPFMYF-RNSPEAAEGSEFSKDWEMTKREYEKLSQKVE 205
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.683e-31 Identity = 75/213 (35.21%), Postives = 122/213 (57.28%), Query Frame = 2 Query: 29 AMVPLFETKEAKARVSHKVFAA-----TCFVGICLILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGEKDKDTTYTQACLTIKKQYQDMKTRIE 652 +++PL E R+SHK + T V + +L YR+++ + W+ F+ + FS W+I ++WS P+ +RL R + LP VD+FV TADP+ EPP +V++TVLS+++ NYP KL+ Y+SDD S T+++L EAS F K W PFCKK++V R+P +F L D D+ +++ +K++Y + ++E Sbjct: 7 SLLPLCE------RISHKSYILRIVDLTILVLLFSLLWYRILHMCENNT------IWLVAFLCESCFSFMWLIITCIKWSPAEDKPYPNRLDERVHD-LPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYFLNPLVATD-DSVFSKDWKMMKREYVKLCRKVE 205
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.683e-31 Identity = 68/183 (37.16%), Postives = 110/183 (60.11%), Query Frame = 2 Query: 119 ILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWF-----AKKLGEKDKDTTYTQACLTIKKQYQDMKTRIE 652 +L+YR++ + W+ F+ + FFS W++ S++WS + + +RL R + LP VD+FV TADP+ EPP LV +T+LS+++ NYP KL+ Y+SDD S T+++L EAS F+K W+PFCKK++++ R+P +F A + E KD T K++Y+ + R+E Sbjct: 36 LLLYRILLMNQNNS------VWVVAFLCESFFSFIWLLITSIKWSPASYKSYPERLDERVHD-LPSVDMFVTTADPVREPPILVANTLLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNIKVRAPFRYFLNPPAATESSEFSKDWEIT------KREYEKLSRRVE 205
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.683e-31 Identity = 72/237 (30.38%), Postives = 133/237 (56.12%), Query Frame = 2 Query: 2 KTGICAIEEAMVPLFETKEAKARVSHKVFAATCFVGICLILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK-----LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGE-KDK-DTTYTQACLTIKKQYQDMKTRIELAIAKGSISKETG 691 ++G + ++P+ TK S+++ + + L YR+ + P + G W+ + + +F++ W++ Q +WS + + DRLS R E + L VD FV T DP+ EPP + +TVLS+++ +YP +K+S Y+SDD + +F +L+E + F++ W+PFCKK+ +EPR+PE +F+ K+ +DK ++ + +K+ Y++ K R+ +AK + E G Sbjct: 162 ESGATDVLSVVIPIPRTKIT----SYRIVIIMRLIILALFFNYRITH-PVDSAYG----LWLTSVICEIWFAVSWVLDQFPKWSPINRETYIDRLSARFEREGEQSQLAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCYVSDDGAAMLSFESLVETADFARKWVPFCKKYSIEPRAPEFYFSLKIDYLRDKVQPSFVKERRAMKRDYEEFKIRMNALVAKAQKTPEEG 389
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.683e-31 Identity = 67/177 (37.85%), Postives = 107/177 (60.45%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK-----LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGE-KDKDTTY-TQACLTIKKQYQDMKTRIELAIAKGSISKETG 691 W+ + + +F++ WI+ Q +W + DRL+LR +++ L +D FV T DP+ EPP + +TVLS+++ +YP +K+S Y+SDD + TF AL E S F+K W+PFCKK+ +EPR+PE +F +K+ KDK Y + +K++Y++ K RI +AK E G Sbjct: 308 WLISVICEIWFAMSWILDQFPKWFPIERETYLDRLTLRFDKEGQTSQLAPIDFFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKYSIEPRAPEWYFQQKIDYLKDKVAPYFVRERRAMKREYEEFKVRINALVAKAQKVPEEG 484
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.805e-31 Identity = 67/177 (37.85%), Postives = 111/177 (62.71%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK-----LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGE-KDK-DTTYTQACLTIKKQYQDMKTRIELAIAKGSISKETG 691 W+ + + +F+L WI+ Q +W + + DRL+LR++ + L VDIFV T DP+ EPP + +TVLS+++ +YP +K+S Y+SDD + TF AL E S F++ W+PF KK+++EPR+PE +F++K+ KDK ++ + +K++Y++ K RI +AK E G Sbjct: 305 WLLSVICEIWFALSWILDQFPKWFPINRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFVKKYNIEPRAPEWYFSQKIDYLKDKVHPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEG 481
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 2.271e-30 Identity = 61/157 (38.85%), Postives = 97/157 (61.78%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGEKDKDTTYTQACLTIKKQYQDMKTRIE 652 W+ F + F L ++ ++WS PF DRL R + LP VD+FV TADP+ EPP +V+ TVLS+++ NYP KL+ Y+SDD S T+++L EAS F+K W+PFCKK++ R+P +F K + +D + + K++Y+ ++ ++E Sbjct: 51 WLVAFFCESCFFLVCLLITCLKWSPADTKPFPDRLDERVHD-LPSVDMFVPTADPVREPPIMVVDTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNTRVRAPSRYFLKPISVATEDYEFNRDWEKTKREYEKLRRKVE 206
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.271e-30 Identity = 66/177 (37.29%), Postives = 107/177 (60.45%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK-----LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGE-KDK-DTTYTQACLTIKKQYQDMKTRIELAIAKGSISKETG 691 W+ + + +F++ WI+ Q +W + DRL+LR +++ L VD FV T DP+ EPP + +TVLS+++ +YP +K+S Y+SDD + TF AL E S F+K W+PFCK++ +EPR+PE +F +K+ KDK + + +K++Y++ K RI +AK E G Sbjct: 307 WLISVICEIWFAMSWILDQFPKWFPIERETYLDRLTLRFDKEGQQSQLAPVDFFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKRYSLEPRAPEWYFQQKIDYLKDKVAPNFVRERRAMKREYEEFKVRINALVAKAQKVPEEG 483
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.271e-30 Identity = 66/177 (37.29%), Postives = 107/177 (60.45%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK-----LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGE-KDK-DTTYTQACLTIKKQYQDMKTRIELAIAKGSISKETG 691 W+ + + +F++ WI+ Q +W + DRL+LR +++ L VD FV T DP+ EPP + +TVLS+++ +YP +K+S Y+SDD + TF AL E S F+K W+PFCK++ +EPR+PE +F +K+ KDK + + +K++Y++ K RI +AK E G Sbjct: 307 WLISVICEIWFAMSWILDQFPKWFPIERETYLDRLTLRFDKEGQQSQLAPVDFFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKRYSLEPRAPEWYFQQKIDYLKDKVAPNFVRERRAMKREYEEFKVRINALVAKAQKVPEEG 483
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.271e-30 Identity = 64/176 (36.36%), Postives = 105/176 (59.66%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRH----EEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGE-KDK-DTTYTQACLTIKKQYQDMKTRIELAIAKGSISKETG 691 W+ + + +F WI+ Q +W + + DRL R+ + L VD FV T DP+ EPP + +TVLS+++ +YP EK+S Y+SDD + TF +L E + F++ W+PFCKK+ +EPR+PE +F++K+ KDK ++ + +K+ Y++ K RI +AK + E G Sbjct: 218 WMTSVICEIWFGFSWILDQFPKWCPINRETYVDRLIARYGDGEDSGLAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKISCYVSDDGSAMLTFESLAETAEFARRWVPFCKKYSIEPRAPEFYFSQKIDYLKDKIHPSFVKERRAMKRDYEEYKVRINALVAKAQKTPEEG 393 The following BLAST results are available for this feature:
BLAST of FC931673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931673 ID=FC931673; Name=FC931673; organism=Citrus clementina; type=EST; length=727bpback to top |