FC931673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 2.271e-30 Identity = 64/176 (36.36%), Postives = 105/176 (59.66%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRH----EEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGE-KDK-DTTYTQACLTIKKQYQDMKTRIELAIAKGSISKETG 691 W+ + + +F WI+ Q +W + + DRL R+ + L VD FV T DP+ EPP + +TVLS+++ +YP EK+S Y+SDD + TF +L E + F++ W+PFCKK+ +EPR+PE +F++K+ KDK ++ + +K+ Y++ K RI +AK + E G Sbjct: 218 WMTSVICEIWFGFSWILDQFPKWCPINRETYVDRLIARYGDGEDSGLAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKISCYVSDDGSAMLTFESLAETAEFARRWVPFCKKYSIEPRAPEFYFSQKIDYLKDKIHPSFVKERRAMKRDYEEYKVRINALVAKAQKTPEEG 393
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.966e-30 Identity = 61/177 (34.46%), Postives = 107/177 (60.45%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK-----LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLG--EKDKDTTYTQACLTIKKQYQDMKTRIELAIAKGSISKETG 691 W+ + + +F++ WI+ Q +W + DRLSLR+E++ L VD+FV T DP+ EPP + +TVLS+++ +YP +K++ Y+SDD + TF AL + + F++ W+PFCKKF++EPR+PE +F++K+ + + + +K+ Y++ K +I +A E G Sbjct: 306 WLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSGLAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSDTAEFARKWVPFCKKFNIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKRDYEEFKVKINALVATAQKVPEEG 482
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.874e-30 Identity = 62/177 (35.03%), Postives = 105/177 (59.32%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK-----LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLG--EKDKDTTYTQACLTIKKQYQDMKTRIELAIAKGSISKETG 691 W+ + + +F++ WI+ Q +W + DRLSLR+E++ L VD+FV T DP+ EPP + +TVLS+++ +YP EK++ Y+SDD + TF AL + F++ W+PFCKKF +EPR+PE +F++K+ + D + +K+ Y++ K +I ++ E G Sbjct: 311 WLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSELAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAMLTFEALSYTAEFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKHKVDPAFVMERRAMKRDYEEFKVKINALVSVSQKVPEDG 487
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 8.630e-30 Identity = 60/177 (33.90%), Postives = 105/177 (59.32%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK-----LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLG--EKDKDTTYTQACLTIKKQYQDMKTRIELAIAKGSISKETG 691 W+ + + +F++ W++ Q +W + DRLSLR+E++ L GVD+FV T DP+ EPP + +TVLS+++ +YP ++++ Y+SDD + TF AL E + F++ W+PFCKK+ +EPR+PE +F K+ + + + +K+ Y++ K +I +A E G Sbjct: 293 WLISVICEIWFAVSWVLDQFPKWYPIERETYLDRLSLRYEKEGKPSELAGVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDRVACYVSDDGAAMLTFEALSETAEFARKWVPFCKKYTIEPRAPEWYFCHKMDYLKNKVHPAFVRERRAMKRDYEEFKVKINALVATAQKVPEEG 469
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29 Identity = 59/157 (37.58%), Postives = 100/157 (63.69%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGEKDKDTTYTQACLTIKKQYQDMKTRIE 652 W+ F+ + FS W+++ +WS P+ DRL R + LP VD+FV TADP+ EPP +V++TVLS+++ NYP KL+ Y+SDD S T+++L EAS F+K W+PFCKK++++ R+P +F + + +++ K++Y+ + ++E Sbjct: 51 WLVAFLCESCFSFVWLLSTCTKWSPAETKPYPDRLDERVYD-LPSVDMFVPTADPVREPPIMVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNLKVRAPFRYFLNPFAATE-GSEFSRDWEMTKREYEKLCRKVE 205
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 4.283e-29 Identity = 60/177 (33.90%), Postives = 104/177 (58.76%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK-----LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLG--EKDKDTTYTQACLTIKKQYQDMKTRIELAIAKGSISKETG 691 W+ + + +F++ W++ Q +W + DRLSLR+E++ L VD+FV T DP+ EPP + +TVLS+++ +YP +K++ Y+SDD + TF AL E + F++ W+PFCKK+ +EPR+PE +F K+ + + + +K+ Y++ K +I +A E G Sbjct: 305 WLISVICEIWFAVSWVLDQFPKWYPIERETYLDRLSLRYEKEGKPSGLSPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETAEFARKWVPFCKKYCIEPRAPEWYFCHKMDYLKNKVHPAFVRERRAMKRDYEEFKVKINALVATAQKVPEDG 481
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.246e-28 Identity = 69/215 (32.09%), Postives = 113/215 (52.56%), Query Frame = 2 Query: 38 PLFETKEAKARVSH--KVFAATCFVGICLILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKL--------GEKDKDTTYTQACLTIKKQYQDMKTRIE 652 PLF+T + K + H + + I +R+ + K G W W + D +F W++ Q + S +P L+ RH LPGVD+FV T DP+ EP ++T+LS+++ +YP ++ + YLSDD G+ + A++E + F++ W+PFC+K VEPRSPE +FA K GE D ++++Y++ K RI+ Sbjct: 52 PLFQTYKVKGSILHPYRFLILARLIAIVAFFAWRIRH--KNRDGA---WLWTMSMVGDVWFGFSWVLNQLPKQSPIKRVPDIAALADRHSGDLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYFAMKTQAYKGGVPGELMSDHR------RVRREYEEFKVRID 255
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.246e-28 Identity = 68/203 (33.50%), Postives = 110/203 (54.19%), Query Frame = 2 Query: 77 HKVFAATCFVGICLILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHE----------EKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFA-KKLGEKDK-DTTYTQACLTIKKQYQDMKTRI 649 +++ V + L L +R+ N + W W+ + + +F+ W++ Q + +H + L E LPG+D+FV TAD EPP + +T+LS++S +YP EKLSVY+SDD GS TF A+ EA+ F+K W+PFC+K +EPR+PE++F K+ KDK + + +K+ Y + K R+ Sbjct: 121 YRILIVVRVVSLALFLFWRIRN-----PNNKALWLWLLSVICELWFAFSWLLDQIPKLFPVNHATDIEALKATFETPNPDNPTGKSDLPGIDVFVSTADAEKEPPLVTANTILSILSVDYPVEKLSVYISDDGGSLVTFEAIAEAASFAKIWVPFCRKHKIEPRNPESYFGLKRDPYKDKVRHDFVRERRYVKRAYDEFKVRV 318
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.126e-28 Identity = 67/200 (33.50%), Postives = 116/200 (58.00%), Query Frame = 2 Query: 68 RVSHKVFAATC----FVGICL-ILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGEKDKDTTYTQACLTIKKQYQDMKTRIE 652 R+SHK + +G+ +L+YR+++ + + W+ F + FSL W+I ++WS +P+ + L+ R + LP +D+FV TAD + E P + ++TVLS+++ NYP KL+ Y+SDD S T+++L EAS F K W PFCKK++V R+P +F L D D+ +++ +K++Y + ++E Sbjct: 14 RISHKSYVLRAVDLTILGLLYSLLLYRILHISENDN------VWLLAFFCESCFSLVWLIFTCLKWSPAEDIPYINTLNERVHD-LPSLDMFVPTADTVRESPIITVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYFLNPLVATD-DSVFSKDWKMMKREYVKLCRKVE 205
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.626e-28 Identity = 69/216 (31.94%), Postives = 110/216 (50.93%), Query Frame = 2 Query: 29 AMVPLFETKEAKARVSHKVFAATCFVGICLILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKL--------GEKDKDTTYTQACLTIKKQYQDMKTRIE 652 A PLF T + K + H I ++ + K G W W + D +F W++ Q + S +P L+ RH LPGVD+FV T DP+ EP ++T+LS+++ +YP ++ + YLSDD G+ + A++E + F++ W+PFC+K VEPRSPE +FA K GE D ++++Y++ K RI+ Sbjct: 79 ARPPLFRTYKVKGSILHPYRFLILLRLIAIVAFFAWRVRHKNRDGV---WLWTMSMVGDVWFGFSWVLNQLPKLSPIKRVPDLAALADRHSGDLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYFAMKTQAYKGGVPGELMSDHR------RVRREYEEFKVRID 285 The following BLAST results are available for this feature:
BLAST of FC931673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931673 ID=FC931673; Name=FC931673; organism=Citrus clementina; type=EST; length=727bpback to top |