FC931673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.077e-28 Identity = 66/195 (33.85%), Postives = 109/195 (55.90%), Query Frame = 2 Query: 101 FVGICLILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWS----------VRHHLPFKDRLSLRHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLG-EKDKD-TTYTQACLTIKKQYQDMKTRI 649 FV +C L +R+ N P E+ W W+ + + +F WI+ Q + +R + LPG+D+FV TADP EPP + +T+LS+++ +YP EK+S YLSDD G+ +F A+ EA+ F+ W+PFC+K ++EPR+P+++F+ K+ K+K + + IK++Y + K RI Sbjct: 279 FVVLCFFLTWRIRN-PNEDA----IWLWLMSIICELWFGFSWILDQIPKLCPINRSTDLEVLRDKFDMPSPSNPTGRSDLPGIDLFVSTADPEKEPPLVTANTILSILAVDYPVEKVSCYLSDDGGALLSFEAMAEAASFADLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSRIDFVKDRRKIKREYDEFKVRI 468
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.350e-27 Identity = 67/215 (31.16%), Postives = 115/215 (53.49%), Query Frame = 2 Query: 38 PLFETKEAKARVSH--KVFAATCFVGICLILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEE-----KLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKK----LGEKDKDTTYTQACLTIKKQYQDMKTRI 649 P+F T++ K + H +V + L +I+R+ E + W W+ +F+F W++ Q + + + +P L R + LPG+DIFV TADPI EP +++LS+++ +YP ++ + YLSDD+G T+ A+ EA+ F+ W+PFC+K +EPR PE++F K +G ++ + ++K+Y D K RI Sbjct: 91 PVFRTEKIKGVLLHPYRVLIFVRLIAFTLFVIWRI-----EHKNPDAMWLWVTSIAGEFWFGFSWLLDQLPKLNPINRVPDLAVLRRRFDHADGTSSLPGLDIFVTTADPIKEPILSTANSILSILAADYPVDRNTCYLSDDSGMLLTYEAMAEAAKFATLWVPFCRKHAIEPRGPESYFELKSHPYMGRAQEE--FVNDRRRVRKEYDDFKARI 298
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.235e-27 Identity = 68/203 (33.50%), Postives = 108/203 (53.20%), Query Frame = 2 Query: 77 HKVFAATCFVGICLILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK----------LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLG--EKDKDTTYTQACLTIKKQYQDMKTRI 649 +++ A V + L L +R V P E W W + +F+L W++ Q + + L L R E LPG+D+FV TADP EPP + +T+LS+++ +YP EKL+ YLSDD G+ TF AL + + F+ W+PFC+K ++EPR+PEA+F +K + + + +K++Y + K RI Sbjct: 317 YRLLIALRLVALGLFLTWR-VRHPNREA----MWLWGMSTTCELWFALSWLLDQLPKLCPVNRLTDLGVLKERFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKLACYLSDDGGALLTFEALAQTASFASTWVPFCRKHNIEPRNPEAYFGQKRNFLKNKVRLDFVRERRRVKREYDEFKVRI 514
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.235e-27 Identity = 69/209 (33.01%), Postives = 113/209 (54.07%), Query Frame = 2 Query: 59 AKARVSHKVFAATCFVGICLILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK----------LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFA--KKLGEKDKDTTYTQACLTIKKQYQDMKTRI 649 AK +++ V + L +R+ N P E+ W W + + +F+ WI+ + + + L + E+ LPGVD+FV TADP EPP + +T+LS+++ +YP EKLS Y+SDD G+ TF A+ EA F++YW+PFC+K D+EPR+P+++F+ K + K + + IK++Y + K RI Sbjct: 176 AKILSPYRLLIVIRLVIVFFFLWWRITN-PNEDA----MWLWGLSIVCEIWFAFSWILDILPKLNPINRATDLAALHDKFEQPSPSNPTGRSDLPGVDVFVSTADPEKEPPLVTANTLLSILAVDYPIEKLSAYISDDGGAILTFEAMAEAVRFAEYWVPFCRKHDIEPRNPDSYFSIKKDPTKNKKRQDFVKDRRWIKREYDEFKVRI 379
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.989e-26 Identity = 65/205 (31.71%), Postives = 112/205 (54.63%), Query Frame = 2 Query: 77 HKVFAATCFVGICLILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK----------LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKK----LGEKDKDTTYTQACLTIKKQYQDMKTRI 649 +++ FV + L L++R+ N P + W W + +F+F+ W++ Q + + + L + E LPG+D+F+ TADP EP + +T+LS+++ YP EKL VY+SDD G+ TF ++ EA F+K W+PFC+K +EPR+P+++F +K G+K D + + IK++Y + K R+ Sbjct: 154 YRLLVLVRFVALFLFLVWRVTN-PNMDA----LWLWGISIVCEFWFAFSWLLDQMPKLNPINRAADLAALKEKFESPSPTNPTGRSDLPGLDVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKVWVPFCRKHSIEPRNPDSYFTQKGDPTKGKKRPD--FVKDRRWIKREYDEFKIRV 351
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.989e-26 Identity = 65/205 (31.71%), Postives = 112/205 (54.63%), Query Frame = 2 Query: 77 HKVFAATCFVGICLILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK----------LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKK----LGEKDKDTTYTQACLTIKKQYQDMKTRI 649 +++ FV + L L++R+ N P + W W + +F+F+ W++ Q + + + L + E LPG+D+F+ TADP EP + +T+LS+++ YP EKL VY+SDD G+ TF ++ EA F+K W+PFC+K +EPR+P+++F +K G+K D + + IK++Y + K R+ Sbjct: 154 YRLLVLVRFVALFLFLVWRVTN-PNMDA----LWLWGISIVCEFWFAFSWLLDQMPKLNPINRAADLAALKEKFESPSPTNPTGRSDLPGLDVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKVWVPFCRKHSIEPRNPDSYFTQKGDPTKGKKRPD--FVKDRRWIKREYDEFKIRV 351
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.788e-26 Identity = 62/170 (36.47%), Postives = 98/170 (57.65%), Query Frame = 2 Query: 176 WAWIGIFMADFFFSLFWIITQSVRWSVRHHLP----FKDRLSL------RHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWF-AKKLGEKDK-DTTYTQACLTIKKQYQDMKTRI 649 W W + + +F L W++ Q + + KD+ LPG+DIFV TADP EPP + +T+LS+++ +YP EKLS Y+SDD G+ TF A+ EA+ F+ W+PFC+K D+EPR+PE++F K+ K+K + + + +K++Y + K RI Sbjct: 343 WLWGMSVVCELWFGLSWLLDQLPKLCPVNRATDLAVLKDKFETPTPSNPNGRSDLPGLDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKHDIEPRNPESYFNLKRDPYKNKVRSDFVKDRRRVKREYDEFKVRI 512
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.788e-26 Identity = 62/170 (36.47%), Postives = 98/170 (57.65%), Query Frame = 2 Query: 176 WAWIGIFMADFFFSLFWIITQSVRWSVRHHLP----FKDRLSL------RHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWF-AKKLGEKDK-DTTYTQACLTIKKQYQDMKTRI 649 W W + + +F L W++ Q + + KD+ LPG+DIFV TADP EPP + +T+LS+++ +YP EKLS Y+SDD G+ TF A+ EA+ F+ W+PFC+K D+EPR+PE++F K+ K+K + + + +K++Y + K RI Sbjct: 343 WLWGMSVVCELWFGLSWLLDQLPKLCPVNRATDLAVLKDKFETPTPSNPNGRSDLPGLDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKHDIEPRNPESYFNLKRDPYKNKVRSDFVKDRRRVKREYDEFKVRI 512
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.358e-25 Identity = 57/170 (33.53%), Postives = 92/170 (54.12%), Query Frame = 2 Query: 176 WAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK----------LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLG--EKDKDTTYTQACLTIKKQYQDMKTRI 649 W W + +F+ W++ + H L+ R E LPG+D+FV +ADP EPP + +T+LS+++ +YP EKL+ YLSDD G+ +F AL E + F++ W+PFC+K VEPR PEA+F +K + + + +K++Y + K R+ Sbjct: 354 WLWAMSVACEVWFAFSWLLDSLPKLCPVHRAADLAVLAERFESPTARNPKGRSDLPGIDVFVTSADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLSFEALAETASFARTWVPFCRKHGVEPRCPEAYFGQKRDFLKNKVRVDFVRERRKVKREYDEFKVRV 523
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.092e-24 Identity = 58/170 (34.12%), Postives = 100/170 (58.82%), Query Frame = 2 Query: 176 WAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHE----------EKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFA-KKLGEKDK-DTTYTQACLTIKKQYQDMKTRI 649 W W + + +F+L W++ Q + + + L + E LPG+D+FV TADP EPP + +T+LS+++ +YP EKL+ Y+SDD G+ TF A+ EA+ F+ W+PFC+K ++EPR+P+++F+ K+ K+K + + +K++Y + K RI Sbjct: 321 WLWGMSVVCELWFALSWLLDQLPKLCPINRATDLNVLKEKFETPTPSNPTGKSDLPGLDMFVSTADPEKEPPLVTSNTILSILAADYPVEKLACYVSDDGGALLTFEAMAEAASFANMWVPFCRKHNIEPRNPDSYFSLKRDPYKNKVKADFVKDRRRVKREYDEFKVRI 490 The following BLAST results are available for this feature:
BLAST of FC931673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931673 ID=FC931673; Name=FC931673; organism=Citrus clementina; type=EST; length=727bpback to top |