FC931673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.432e-24 Identity = 56/197 (28.43%), Postives = 108/197 (54.82%), Query Frame = 2 Query: 77 HKVFAATCFVGICLILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEK-LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKK----LGEKDKDTTYTQACLTIKKQYQDMKTRIE 652 +++ + + L L +RL + + W W DF+F + W++ Q+ + + +P L R ++ LPG+D+F+ T DP+ EP ++++LS+++ +YP ++ + YLSDD S + L+E + F+ W+PFC+K VEPR+PE++FA K G + + L ++++Y++ K R++ Sbjct: 78 YRLLTLVRLIAVVLFLAWRL-----KHRDSDAMWLWWISIAGDFWFGVTWLLNQASKLNPVKRVPDLSLLRRRFDDGGLPGIDVFINTVDPVDEPMLYTMNSILSILATDYPADRHAAYLSDDGASLAHYEGLIETARFAALWVPFCRKHRVEPRAPESYFAAKAAPYAGPALPEEFFGDRRL-VRREYEEFKARLD 268
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.176e-24 Identity = 59/192 (30.73%), Postives = 106/192 (55.21%), Query Frame = 2 Query: 110 ICLILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHE----------EKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFA-KKLGEKDK-DTTYTQACLTIKKQYQDMKTRI 649 I ++++ + + + Q W W + + +F+L W++ Q + + L + E LPG D+FV TADP EPP + +T+LS+++ YP EKLS Y+SDD G+ TF A+ EA+ F+ W+PFC+K +EPR+P+++F+ K+ K+K + + + +K+++ + K R+ Sbjct: 302 IRIVVLALFLTWRVKHQNPDAVWLWGMSVVCELWFALSWLLDQLPKLCPINRATDLQVLKEKFETPTASNPTGKSDLPGFDVFVSTADPEKEPPLVTANTILSILAAEYPVEKLSCYVSDDGGALLTFEAMAEAASFANIWVPFCRKHAIEPRNPDSYFSLKRDPYKNKVKSDFVKDRRRVKREFDEFKVRV 493
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.148e-24 Identity = 66/215 (30.70%), Postives = 115/215 (53.49%), Query Frame = 2 Query: 41 LFETKEAKARVSH--KVFAATCFVGICLILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHE-----EKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKK----LGEKDKDTTYTQACLTIKKQYQDMKTRIE 652 LF T + + H ++ V I L I+R + P + G W WI + + DF+F + W++ Q + +P + L + + LPG+D+F+ T DPI+EP ++ +LS+++ +YP +K + YLSDD GS + LLE + F+ W+PFC+K +EPR+PE++FA K G +D + ++++Y + K R++ Sbjct: 78 LFRTFTVRGILLHPYRLLTLVRLVAIVLFFIWR-IRHPYAD--GMFFW-WISV-IGDFWFGVSWLLNQVAKLKPIRRVPDLNLLQQQFDLPDGNSNLPGLDVFINTVDPINEPMIYTMNAILSILAADYPVDKHACYLSDDGGSIIHYDGLLETAKFAALWVPFCRKHSIEPRAPESYFAVKSRPYAGSAPED--FLSDHRYMRREYDEFKVRLD 285
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 7.076e-24 Identity = 62/185 (33.51%), Postives = 105/185 (56.76%), Query Frame = 2 Query: 104 VGICLILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPP--EKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGEKDKDTTYTQACLTIKKQYQDMKTRIE 652 + I +L+ L++ + G R A + + +F+ W++ + +WS F + L+ R +E LP VD+FV TADP+ EPP + ++TVLS+++ +YP EKL+ Y+SDD S T YAL EA+ F++ W+PFC++ V R+P +F+ D + + +K +Y+ + RIE Sbjct: 27 LAILFLLLALLLHRVLHDSGAPWRRAALA---CEAWFTFMWLLNVNAKWSPVRFDTFPENLAERIDE-LPAVDMFVTTADPVLEPPLVTVNTVLSLLALDYPAAGEKLACYVSDDGCSPLTCYALREAARFARTWVPFCRRHGVAVRAPFRYFSSTPEFGPADGKFLEDWTFMKSEYEKLVHRIE 207
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.076e-24 Identity = 61/194 (31.44%), Postives = 108/194 (55.67%), Query Frame = 2 Query: 104 VGICLILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLP----FKDRLSL------RHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWF-AKKLGEKDK-DTTYTQACLTIKKQYQDMKTRI 649 V + L L++R+ + Q W W + + +F+L W++ Q + + KD+ + LPG+DIFV TADP EP + +T+LS+++ +YP +KL+ Y+SDD G+ TF A+ EA+ F+ W+PFC+K ++EPR+P+++F K+ K+K + + +K++Y + K R+ Sbjct: 275 VALGLFLMWRI-----KHQNEDAIWLWGMSIVCELWFALSWVLDQLPKLCPINRATDLSVLKDKFETPTPSNPTGKSDLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYFNLKRDPFKNKVKGDFVKDRRRVKREYDEFKVRV 463
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 7.076e-24 Identity = 61/194 (31.44%), Postives = 108/194 (55.67%), Query Frame = 2 Query: 104 VGICLILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLP----FKDRLSL------RHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWF-AKKLGEKDK-DTTYTQACLTIKKQYQDMKTRI 649 V + L L++R+ + Q W W + + +F+L W++ Q + + KD+ + LPG+DIFV TADP EP + +T+LS+++ +YP +KL+ Y+SDD G+ TF A+ EA+ F+ W+PFC+K ++EPR+P+++F K+ K+K + + +K++Y + K R+ Sbjct: 275 VALGLFLMWRI-----KHQNEDAIWLWGMSIVCELWFALSWVLDQLPKLCPINRATDLSVLKDKFETPTPSNPTGKSDLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYFNLKRDPFKNKVKGDFVKDRRRVKREYDEFKVRV 463
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.576e-23 Identity = 57/177 (32.20%), Postives = 100/177 (56.50%), Query Frame = 2 Query: 182 WIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRHEE-----KLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGE-KDKDT-TYTQACLTIKKQYQDMKTRIELAIAKGSISKETG 691 W+ + + + W+I Q + S + + + DRL+ R+E+ +L GVD+FV AD EPP +TVLSV++ +YP ++ Y+ DD F +L EA+ F++ WIPFC++ VEPR+PE +FA+ + +D+ ++ + +K++Y++ K R+ A+ E G Sbjct: 77 WVTSVACELWLAASWLIAQLPKLSPANRVTYLDRLASRYEKGGEASRLAGVDVFVAAADAAREPPLATANTVLSVLAADYPAGGVACYVHDDGADMLVFESLFEAAGFARRWIPFCRRHGVEPRAPELYFARGVDYLRDRAAPSFVKDRRAMKREYEEFKVRMNHLAARARKVPEEG 253
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.059e-23 Identity = 60/171 (35.09%), Postives = 94/171 (54.97%), Query Frame = 2 Query: 80 KVFAATCFVGICLILI-------YRLVNFPKEEQGG----RRRWAWIGIFMADFFFSLFWIITQSVR-WSVRHHLPFKDRLSLRHEEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWF 556 K++ T FV I + ++ Y + GG + W + +F+ W++ Q + VR + D +L + LP +D+FV TADP EPP +TVLS+++ YP K++ Y+SDDAG+E T A++EA+ F+ W+PFC+K VEPR+PEA+F Sbjct: 57 KLYRLTIFVRIAIFVLFFKWRITYAARAISSTDAGGIGMSKAATFWTASIAGELWFAFMWVLDQLPKTMPVRRAV---DVTALNDDTLLPAMDVFVTTADPDKEPPLATANTVLSILAAGYPAGKVTCYVSDDAGAEVTRGAVVEAARFAALWVPFCRKHGVEPRNPEAYF 224
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 2.059e-23 Identity = 50/117 (42.74%), Postives = 79/117 (67.52%), Query Frame = 2 Query: 308 LPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGEKDKD---TTYTQACLTIKKQYQDMKTRI 649 LPG+D+FV TADP EP +T+LS+++ +YP EKL+ Y+SDD G+ TF A+ EA+ F+ W+PFCKK D+EPR+P+++F+ K G+ K + + +K+++ + K RI Sbjct: 378 LPGLDVFVSTADPEKEPVLTTATTILSILAVDYPVEKLACYVSDDGGALLTFEAMAEAASFANVWVPFCKKHDIEPRNPDSYFSVK-GDPTKGKRRNDFVKDRRRVKREFDEFKVRI 493
BLAST of FC931673 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.689e-23 Identity = 64/223 (28.70%), Postives = 110/223 (49.33%), Query Frame = 2 Query: 14 CAIEEAMVPL-FETKEAKARVSHKVFAATCFVGICLILIYRLVNFPKEEQGGRRRWAWIGIFMADFFFSLFWIITQSVRWSVRHHLPFKDRLSLRH-------EEKLPGVDIFVCTADPISEPPTLVISTVLSVMSYNYPPEKLSVYLSDDAGSEFTFYALLEASHFSKYWIPFCKKFDVEPRSPEAWFAKKLGE--KDKDTTYTQACLTIKKQYQDMKTRIE 652 C E+ PL F + K + H + A F + +L++ + W W D +F W++ Q +++ +P D +LR +LPG+D+FV TADPI EP ++ VLS+++ +YP ++ + YLSDD+G+ + AL+E + F+ W+PFC+K +EPRSPE++F + + + +Y + K R+E Sbjct: 66 CGGEDGRRPLLFRSYRVKGSLLHP-YRALIFARLIAVLLF--FGWRIRHNNSDIMWFWTMSVAGDVWFGFSWLLNQLPKFNPVKTIP--DLTALRQYCDLADGSYRLPGIDVFVTTADPIDEPVLYTMNCVLSILAADYPVDRSACYLSDDSGALILYEALVETAKFATLWVPFCRKHCIEPRSPESYFELEAPSYTGSAQEEFKNDSRIVHLEYDEFKVRLE 283 The following BLAST results are available for this feature:
BLAST of FC931673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931673 ID=FC931673; Name=FC931673; organism=Citrus clementina; type=EST; length=727bpback to top |