FC931674

Overview
NameFC931674
Unique NameFC931674
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931674 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.249e-27
Identity = 78/213 (36.62%), Postives = 116/213 (54.46%), Query Frame = 3
Query:   87 MELANMISVPMSLTAAIRLHVPDAIW-QGGANTPLSASQILTR--ILPSGGGDAENLQRILRLLTSYGVFS---EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMKSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 707
            M+LA+   +PM+L  A+ L + + +  +  A   L+  +++ R  + P+    A+ + R+LRLL SY V     E ++   ER+YS   +GK L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  + M   SV   K +L+ Y GF+GV  LVDVGG  G  L  I   HP I +GINFDL
Sbjct:   21 MQLASASILPMTLKNALELGLLEVLQAEAPAGKALAPEEVVARLPVAPTNPDAADMVDRMLRLLASYDVVKCQMEDKDGKYERRYSAAPVGKWLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGI-PFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAITSHHPQI-KGINFDL 231          
BLAST of FC931674 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.011e-27
Identity = 79/219 (36.07%), Postives = 121/219 (55.25%), Query Frame = 3
Query:   66 KKVRLAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAE-NLQRILRLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMKSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 707
            ++  L  M+LA+   +PM L +A+ L + + I + G    +S  +I ++ LP+   DA   L R+LRLL  Y + +      ++   +R Y L  + K LV + +G+S +   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  K MS  S   MK +L+ Y GF+G+K LVDVGG  G  +  I+ K+P I +GINFDL
Sbjct:   17 EEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQ-LPTTNPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTI-KGINFDL 232          
BLAST of FC931674 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.011e-27
Identity = 83/235 (35.32%), Postives = 122/235 (51.91%), Query Frame = 3
Query:   30 AVMEDNECRDGGKKVRLAIMELANMISVPMSLTAAIRLHVPDAIWQ--GGANTPLSASQILTRILPSGGGD----AENLQRILRLLTSYGVFS---EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMKSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 707
            AV+++  C        +  M+LA+   +PM+L  AI L + + + +  GG    L+  +++ R +P+   D    A  + R+LRLL SY V     E R+   ER+YS   + K L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G     N +  + M   SV   K +LD Y GF+GV  LVDVGG  G  L  I  +HP I  G+NFDL
Sbjct:   10 AVVDEEAC--------MYAMQLASSSILPMTLKNAIELGLLEVLQKEAGGGKAALAPEEVVAR-MPAAPSDPAAAAAMVDRMLRLLASYDVVRCQMEDRDGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGI-PFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHI-SGVNFDL 233          
BLAST of FC931674 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.545e-27
Identity = 82/222 (36.94%), Postives = 121/222 (54.50%), Query Frame = 3
Query:   66 KKVRLAIMELANMISVPMSLTAAIRLHVPDAIWQG---GANTPLSASQILTRILPSGGGDAE-NLQRILRLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMKSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 707
            ++  L  M+LA+   +PM L AAI L V + + +    G+   +S ++I  + LP+   DA   L R+LRLL SY V +    E  +   ER Y L  + K L  + +G+S AP  L +    LM +W  + +A+LD  I PF K +G  A+ Y+G  P  N +  + MS  S   MK + + Y GF+ +  +VDVGG  G  L MI+ K+P I +GINFDL
Sbjct:   19 EEANLFAMQLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAEIAAQ-LPTTNPDAPVMLDRVLRLLASYSVVTCSLRELPDGKVERLYGLAPVCKFLTKNEDGVSLAPLCLMNQDKVLMESWYYLKDAILDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKIFEMYTGFEALNTIVDVGGGTGAVLSMIVAKYPSI-KGINFDL 237          
BLAST of FC931674 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26
Identity = 77/215 (35.81%), Postives = 115/215 (53.49%), Query Frame = 3
Query:   78 LAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAE-NLQRILRLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMKSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 707
            L  M+LA+   +PM L  AI L + + I + G +  +S+S+++ ++      +A   + RI  LL SY V +    E  +   ER Y L  + K L+ +  G+S AP +L +    LM +W  + + VLD  I PF K +G  A+ Y+GK    N +    M   S   MK +++ Y+GF G+K LVDVGG  G  L MI  KH  + +GINFDL
Sbjct:   11 LFAMQLASASVLPMVLKTAIELDLLETIAKAGPHGSVSSSELVAQLPKVNNPEAPVMIDRICSLLASYSVLTCTLKETADGCAERFYGLAPVCKFLIKNDAGVSLAPLLLMNQDKVLMESWYYLKDPVLDGGI-PFNKAYGMSAFEYHGKDQRFNKVFNSGMFNHSTMTMKKIVELYNGFSGLKTLVDVGGGTGASLNMITSKHKSL-KGINFDL 223          
BLAST of FC931674 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.904e-26
Identity = 79/212 (37.26%), Postives = 114/212 (53.77%), Query Frame = 3
Query:   87 MELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAE-NLQRILRLLTSYGVF----SEHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMKSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 707
            M+L +   +PM L  AI L + + + + G    LS S I +  LP+   DA   L RILRLL SY +      +  +   ER Y L  + K L  + +G+S +P  L +    LM +W  + +A+L+  I PF K +G  A+ Y+G  P  N +  K MS  S   MK +L+ Y GF+G+  LVDVGG  G  +  I+ K+P I +GINFDL
Sbjct:   23 MQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASH-LPTKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGI-PFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGFEGLASLVDVGGGTGAVVSTIVSKYPSI-KGINFDL 231          
BLAST of FC931674 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.904e-26
Identity = 77/218 (35.32%), Postives = 116/218 (53.21%), Query Frame = 3
Query:   66 KKVRLAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENLQRILRLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMKSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 707
            ++  L  M+LA+   +PM L AAI L + + + + G    LS  ++  ++          L RI RLL SY V +       +   ER Y L  + K LV + +G+S A   L +    LM +W  + +AVL+  I PF K +G  A+ Y+G  P  N +  + MS  S   MK +L+ Y GF+G++ +VDVGG  G  L MI+ K+P + +GINFDL
Sbjct:   18 EEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPGEVAAQLPTQNPEAPVMLDRIFRLLASYSVLTCTLRNLPDGKVERLYGLAPVCKFLVKNEDGVSIAALNLMNQDKILMESWYYLKDAVLEGGI-PFNKAYGMTAFEYHGTDPRFNKIFNRGMSDHSTITMKKILETYKGFEGLETVVDVGGGTGAVLSMIVAKYPSM-KGINFDL 233          
BLAST of FC931674 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.540e-26
Identity = 82/212 (38.68%), Postives = 115/212 (54.25%), Query Frame = 3
Query:   78 LAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENL-QRILRLLTSYGVFS-EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMKSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 707
            L  M+LA+   +PM L +AI L + + I   G +T +S ++I +  LP+   DA  +  RILRLL+ Y V +   R    +R Y L  + K L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  ++ Y+G  P  N +  + MS  S   MK V   Y GF+G+  LVDVGG  G  L MIL K+P I   INFDL
Sbjct:    2 LFAMQLASASVLPMVLKSAIELDLLEII--RGQDTCMSPTEIASH-LPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGI-PFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQAYQGFQGLTSLVDVGGGTGATLTMILSKYPTI-RCINFDL 208          
BLAST of FC931674 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.450e-26
Identity = 75/218 (34.40%), Postives = 116/218 (53.21%), Query Frame = 3
Query:   66 KKVRLAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENLQRILRLLTSYGVFSEHR----EFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMKSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 707
            ++  L  M+LA+   +PM L AAI L + + + + G    LS + + +++          L R+LRLL SY + +       +   ER Y L  + K L  + +G+S A   L +    L+ +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  K M+  S   MK +L+ Y GF+G+  +VDVGG  G  + MI+ K+P I +GINFDL
Sbjct:   17 EEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPEAPVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGI-PFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVSKYPSI-KGINFDL 232          
BLAST of FC931674 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25
Identity = 82/212 (38.68%), Postives = 114/212 (53.77%), Query Frame = 3
Query:   78 LAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENL-QRILRLLTSYGVFS-EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMKSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 707
            L  M+LA    +PM L +AI L + + I   G +T +S ++I +  LP+   DA  +  RILRLL+ Y V +   R    +R Y L  + K L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  ++ Y+G  P  N +  + MS  S   MK V   Y GF+G+  LVDVGG  G  L MIL K+P I   INFDL
Sbjct:    2 LFAMQLACASVLPMVLKSAIELDLLEII--RGQDTCMSPTEIASH-LPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGI-PFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQTYQGFQGLTSLVDVGGGTGATLTMILSKYPTI-RCINFDL 208          
The following BLAST results are available for this feature:
BLAST of FC931674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
COMT1_SACOF2.249e-2736.62Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
COMT1_MEDSA5.011e-2736.07Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_MAIZE5.011e-2735.32Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
COMT1_CLABR6.545e-2736.94Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_ZINEL1.458e-2635.81Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT3_POPKI1.904e-2637.26Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_EUCGU1.904e-2635.32Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
OMT1_CHRAE5.540e-2638.68Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_ROSCH9.450e-2634.40Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
OMT2_CHRAE2.750e-2538.68Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]

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Properties
Property NameValue
Genbank descriptionC34107G05EF PostHarvP1 Citrus clementina cDNA clone C34107G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931674 ID=FC931674; Name=FC931674; organism=Citrus clementina; type=EST; length=709bp
GATGGTGCTGCGAAATCAAAGGTCAGTAAGCAGTAATGGAAGATAACGAG
TGCAGAGATGGCGGGAAGAAGGTAAGACTGGCCATAATGGAGCTGGCCAA
CATGATAAGTGTTCCCATGTCCCTAACCGCTGCCATCCGTCTCCACGTAC
CGGATGCCATCTGGCAAGGTGGGGCCAATACCCCTCTCTCCGCCTCCCAG
ATCTTGACACGTATCCTCCCATCCGGCGGTGGGGACGCCGAGAACTTGCA
ACGTATCCTCCGCTTGCTCACCAGCTACGGCGTGTTCTCGGAGCATCGCG
AGTTTGGAGGCGAAAGGAAGTACAGCCTCACCGAGATCGGGAAATCCCTC
GTTACTGATGCCGAGGGTCTATCGTACGCGCCCTACGTGCTCCAGCATCA
CCAGGACGCGCTTATGAGCGCGTGGCCTTTGGTGCACGAGGCCGTTCTGG
ACCCAACTATTGAGCCATTTGTGAAAGTCCATGGCGAGCCGGCATATAGT
TATTATGGGAAGAAGCCTGAAATGAACGGCTTGATGCGAAAAGCCATGTC
GGGAGTGTCCGTGCCGTTCATGAAGTCCGTTTTGGACGGTTACGATGGGT
TCAAAGGTGTGAAGCGATTGGTTGATGTGGGTGGGAGTGCAGGTGATTGC
CTGAGGATGATATTACAGAAACATCCTTTTATATGTGAAGGGATCAATTT
TGATTTGCC
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