FC931674

Overview
NameFC931674
Unique NameFC931674
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931674 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25
Identity = 71/211 (33.65%), Postives = 112/211 (53.08%), Query Frame = 3
Query:   87 MELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENLQRILRLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMKSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 707
            M+LA+   +PM L A + L + + + + G    +S S++  ++          L R+ RLL +Y V +       +   ER YSL  + K L  + +G+S AP +L +    LM +W  + +AVLD  + PF K +G   + Y+G  P  N +    MS  +   MK +L+ Y GF+G+  +VDVGG  G  + MI+ K+P I +GINFDL
Sbjct:   20 MQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGV-PFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLNSIVDVGGGTGATVNMIVSKYPSI-KGINFDL 228          
BLAST of FC931674 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25
Identity = 86/233 (36.91%), Postives = 120/233 (51.50%), Query Frame = 3
Query:   39 EDNECRDGGKKVRLAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTP----LSASQILTRILPSGG-GDAEN-LQRILRLLTSYGVFSEH----REFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMKSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 707
            ED+ C        L+ M L   +  P  L AAI L++ + I +    TP    +S S+I +++  S    D  N L R+LRLL SY V +       + G ER Y L+ +GK LV D      A +       AL+  W    EAV+D  I+ F  VHG   Y + GK  +MN +  K+M  V    MK +L+ Y GF+G+  LVDVGG +G  L +I+ K+P I +GINFDL
Sbjct:   21 EDSAC--------LSAMVLTTNLVYPAVLNAAIDLNLFEIIAKA---TPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLI-KGINFDL 241          
BLAST of FC931674 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 74/210 (35.24%), Postives = 109/210 (51.90%), Query Frame = 3
Query:   78 LAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENLQRILRLLTSYGVFSEHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMKSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 707
            L+ + L+ +I +PM+L AAI L+V + I Q G +  LS S I+ +I       A +L RILR+L +  + S      G R Y L E  + LV   + +S  P +L     A++ ++  + + VL+  + PF + HG   + Y GK+  +N    +AM   S      V   Y GF  +K LVDVGG  G  L  I+ KHP I  GINF+L
Sbjct:   40 LSGLGLSRLICLPMALRAAIELNVFEIISQAGPDAQLSPSDIVAKIPTKNPSAAISLDRILRMLGASSILSVSTTKSG-RVYGLNEESRCLVASEDKVSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKELVDVGGGIGTSLSNIVAKHPHI-RGINFEL 247          
BLAST of FC931674 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25
Identity = 73/211 (34.60%), Postives = 109/211 (51.66%), Query Frame = 3
Query:   87 MELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENLQRILRLLTSYGVF----SEHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMKSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 707
            ++L +   +PM L  AI L + + + + G    L  S I + +          L RILRLL SY +      +  +   ER Y L  + K L  + +G+S +P  L +    LM +W  + +A+L+  I PF K +G  A+ Y+G  P  N +  K MS  S   MK +L+ Y GF+G+  LVDVGG  G  +  I+ K+P I +GINFDL
Sbjct:   23 LQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGI-PFNKAYGMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILETYKGFEGLASLVDVGGGTGAVVSTIVSKYPSI-KGINFDL 231          
BLAST of FC931674 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.509e-23
Identity = 76/219 (34.70%), Postives = 115/219 (52.51%), Query Frame = 3
Query:   66 KKVRLAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAE-NLQRILRLLTSYGVFSEH-REFGG---ERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMKSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 707
            ++  L  M+LA+   +PM+L AAI L V + + +    +   +   +   LP+   +A   L R+LRLL SY V +   RE      ER Y L  + K L  + +G+S AP++L      L+  W  + +A+L+  I PF K +G   + Y+G     N +  K MS  S   MK +L+ Y+GF+G+  +VDVGG  G    MI+ K+P I   INFDL
Sbjct:   19 EEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLTATDKVLLEPWFYLKDAILEGGI-PFNKAYGMNEFDYHGTDHRFNKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSI-NAINFDL 235          
BLAST of FC931674 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22
Identity = 68/208 (32.69%), Postives = 108/208 (51.92%), Query Frame = 3
Query:   93 LANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENLQRILRLLTSYGVFS---EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMKSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 707
            LAN  + PM L +A  L + D   + G    +S S+I ++I          L R+LRLL S+ V +   +  E G +R Y    +   L ++    S  P ++ HH   +M +W  +++ +L+  + PF + HG   + Y G     N +  + M+  ++  MK +LD Y+GF  VK LVDVGG+ G  + MI+ KH  I +GIN+DL
Sbjct:   28 LANAAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPNAPVLLDRMLRLLASHSVLTCKLQKGEGGSQRVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGV-PFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVKVLVDVGGNIGVNVSMIVAKHTHI-KGINYDL 233          
BLAST of FC931674 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.179e-22
Identity = 73/218 (33.49%), Postives = 108/218 (49.54%), Query Frame = 3
Query:   87 MELANMISVPMSLTAAIRLHVPD-----AIWQGGANTPLSASQILTRILPSGGGDA--ENLQRILRLLTSYGVFSEHREFGGE----RKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMKSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 707
            ++LA+   +PM+L  AI L + +     A+  GG    L     +   LPS    A  + + R+LRLL SY V     E G +    R+Y+   + K L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G     N +  + M   SV   K +LD Y GF     +VDVGG  G  +  ++ +HP I  GIN+DL
Sbjct:   21 LQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGI-PFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFDAASTVVDVGGGVGATVAAVVSRHPHI-RGINYDL 236          
BLAST of FC931674 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.951e-11
Identity = 53/188 (28.19%), Postives = 87/188 (46.28%), Query Frame = 3
Query:  123 LTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENLQRILRLLTSYGVFSEHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMKSVLDG-YDGFKGVKRLVDVGGSAGDCLRMILQKHPFI 683
            L  A+ L + D I     N P++ + + ++ LP    + +NL RILR L    +    +   G++KY+L  I   L  +A+  S  P +L   Q   M+ W  + + + D     F K  G   + Y    P+ + L  + M+G +     S++ G  D F+G+  LVDVGG  G  ++ I    P I
Sbjct:   31 LRCAVELGIVDII--DNNNQPMALADLASK-LPVSDVNCDNLYRILRYLVKMEILRVEKSDDGQKKYALEPIATLLSRNAK-RSMVPMILGMTQKDFMTPWHSMKDGLSD-NGTAFEKAMGMTIWEYLEGHPDQSQLFNEGMAGETRLLTSSLISGSRDMFQGIDSLVDVGGGNGTTVKAISDAFPHI 213          
The following BLAST results are available for this feature:
BLAST of FC931674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
COMT1_CAPCH2.750e-2533.65Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
CHOMT_MEDSA4.690e-2536.91Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
SMT_COPJA8.000e-2535.24(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
COMT2_POPTM8.000e-2534.60Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
IEMT_CLABR1.509e-2334.70(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
IMT1_MESCR1.277e-2232.69Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
OMT1_ORYSJ2.179e-2233.49Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
4OMT_COPJA2.951e-1128.193'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]

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Properties
Property NameValue
Genbank descriptionC34107G05EF PostHarvP1 Citrus clementina cDNA clone C34107G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931674 ID=FC931674; Name=FC931674; organism=Citrus clementina; type=EST; length=709bp
GATGGTGCTGCGAAATCAAAGGTCAGTAAGCAGTAATGGAAGATAACGAG
TGCAGAGATGGCGGGAAGAAGGTAAGACTGGCCATAATGGAGCTGGCCAA
CATGATAAGTGTTCCCATGTCCCTAACCGCTGCCATCCGTCTCCACGTAC
CGGATGCCATCTGGCAAGGTGGGGCCAATACCCCTCTCTCCGCCTCCCAG
ATCTTGACACGTATCCTCCCATCCGGCGGTGGGGACGCCGAGAACTTGCA
ACGTATCCTCCGCTTGCTCACCAGCTACGGCGTGTTCTCGGAGCATCGCG
AGTTTGGAGGCGAAAGGAAGTACAGCCTCACCGAGATCGGGAAATCCCTC
GTTACTGATGCCGAGGGTCTATCGTACGCGCCCTACGTGCTCCAGCATCA
CCAGGACGCGCTTATGAGCGCGTGGCCTTTGGTGCACGAGGCCGTTCTGG
ACCCAACTATTGAGCCATTTGTGAAAGTCCATGGCGAGCCGGCATATAGT
TATTATGGGAAGAAGCCTGAAATGAACGGCTTGATGCGAAAAGCCATGTC
GGGAGTGTCCGTGCCGTTCATGAAGTCCGTTTTGGACGGTTACGATGGGT
TCAAAGGTGTGAAGCGATTGGTTGATGTGGGTGGGAGTGCAGGTGATTGC
CTGAGGATGATATTACAGAAACATCCTTTTATATGTGAAGGGATCAATTT
TGATTTGCC
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