FC931675

Overview
NameFC931675
Unique NameFC931675
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1895 contig Ccv1_Contig1895:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931675 vs. ExPASy Swiss-Prot
Match: MDMC_STRMY (O-methyltransferase mdmC OS=Streptomyces mycarofaciens GN=mdmC PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.762e-28
Identity = 79/193 (40.93%), Postives = 111/193 (57.51%), Query Frame = 3
Query:  135 SDALYQYILETSVYPREAESMKELRELTAKHPWN-VMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLVELVKVGGVIGYDNTLWNGSVVAP-PDAPLRKYVRYYRDFV 707
            S AL  Y    SV  RE   ++EL ++TA+ P    M    +E QFL +L++LV A+  +EIG +TGYS L  A ALP  G+I+  DI+ +   +G P  Q+AGV   ID R G A   L  L ++    G+FD +FVDADK  YL+Y+++ + LV+ GG++  DNTL+ G V  P  D P    VR   D +
Sbjct:    8 SPALLDYA--RSVALREDGLLRELHDMTAQLPGGRAMQIMPEEAQFLGLLIRLVGARRVLEIGTFTGYSTLCMARALPAGGRIVTCDISDKWPGIGAPFWQRAGVDGLIDLRIGDAARTLAEL-RERDGDGAFDLVFVDADKAGYLHYYEQALALVRPGGLVAIDNTLFFGRVADPAADDPDTVAVRTLNDLL 197          
BLAST of FC931675 vs. ExPASy Swiss-Prot
Match: CAMT2_DICDI (Probable caffeoyl-CoA O-methyltransferase 2 OS=Dictyostelium discoideum GN=omt6 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.488e-26
Identity = 61/155 (39.35%), Postives = 99/155 (63.87%), Query Frame = 3
Query:  198 KELRELTAKH-PWNVMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLVELVKVGGVIGYDNTLWNGSVVAP 659
            KEL + T ++   ++M T A++  F  +L++++NAK T++IGV+TG S L  ALA+ D+G+++A D++ E  +  L    KAGV HKI+ +  PA   L  LI D+    ++DF+F+DADK  Y  Y++  ++L++ GG+I  DN L +G V  P
Sbjct:   36 KELIQFTKENIERHIMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTEYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGRVADP 189          
BLAST of FC931675 vs. ExPASy Swiss-Prot
Match: CAMT1_DICDI (Probable caffeoyl-CoA O-methyltransferase 1 OS=Dictyostelium discoideum GN=omt5 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.114e-25
Identity = 60/155 (38.71%), Postives = 99/155 (63.87%), Query Frame = 3
Query:  198 KELRELTAKH-PWNVMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLVELVKVGGVIGYDNTLWNGSVVAP 659
            KEL + T ++   ++M T A++  F  +L++++NAK T++IGV+TG S L  ALA+ D+G+++A D++ +  +  L    KAGV HKI+ +  PA   L  LI D+    ++DF+F+DADK  Y  Y++  ++L++ GG+I  DN L +G V  P
Sbjct:   35 KELIQFTKENIERHIMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTDYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGRVADP 188          
The following BLAST results are available for this feature:
BLAST of FC931675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
MDMC_STRMY7.762e-2840.93O-methyltransferase mdmC OS=Streptomyces mycarofac... [more]
CAMT2_DICDI9.488e-2639.35Probable caffeoyl-CoA O-methyltransferase 2 OS=Dic... [more]
CAMT1_DICDI2.114e-2538.71Probable caffeoyl-CoA O-methyltransferase 1 OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionC34107G06EF PostHarvP1 Citrus clementina cDNA clone C34107G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931675 ID=FC931675; Name=FC931675; organism=Citrus clementina; type=EST; length=714bp
GAACTCAAGTTACTCTTTAAAACTCCAAAATCCAACATCAAAAGAAAAGA
CTTGCGTCAATGGCTTCCAACGCAGAAGATCAACAAAACCAACAAGGCGG
ACACAAGGAAGTTGGCCACAAGAGCCTGCTCCAATCCGATGCCCTCTACC
AGTATATTCTTGAAACCAGTGTGTACCCAAGAGAGGCTGAATCAATGAAG
GAGCTTAGAGAATTGACTGCCAAACATCCATGGAACGTTATGACAACGTC
GGCAGACGAAGGGCAGTTCTTGAACATGCTGTTGAAGCTGGTCAATGCAA
AGAACACAATGGAGATTGGAGTCTACACAGGCTACTCTCTTTTGGCCACT
GCCCTTGCCCTTCCTGATGACGGAAAGATTTTGGCCATGGACATCAACAG
AGAAAATTATGAATTGGGGCTGCCAGTTATCCAAAAAGCTGGTGTTGCTC
ACAAGATTGACTTCAGAGAAGGCCCTGCCCTGCCTGTTCTTGACCTACTG
ATCCAAGATGAGAAGAACCATGGGTCCTTTGACTTCATATTTGTGGACGC
TGATAAGGACAACTACCTAAACTACCACAAGAGGTTGGTTGAGTTGGTGA
AGGTTGGAGGGGTGATCGGGTACGACAACACCCTATGGAACGGATCCGTC
GTGGCGCCACCTGATGCTCCCCTTAGGAAGTACGTTAGGTATTACCGAGA
CTTCGTCTTGNAGC
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