FC931677

Overview
NameFC931677
Unique NameFC931677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931677 vs. ExPASy Swiss-Prot
Match: PDP1_BOVIN ([Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Bos taurus GN=PDP1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 54/171 (31.58%), Postives = 83/171 (48.54%), Query Frame = 2
Query:  152 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQ-----ALNLSKDHKPDLEVEKDRIL------KAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIV--------------------------TANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLT 553
            SG+TACVA +    L VAN GDSR +L  + +     A+ LS DH    E E +R+       +A   ++  R+ G L   RA GDV+FK   S+  +K+++                          TA P+++   L   D+FLV+A DG+W+ +  Q++V  V + LT
Sbjct:  270 SGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNEREVERLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKW--SIDLQKRVIESGPDQLNDNEYTKFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLT 438          
BLAST of FC931677 vs. ExPASy Swiss-Prot
Match: P2C76_ORYSJ (Putative protein phosphatase 2C 76 OS=Oryza sativa subsp. japonica GN=Os11g0586100 PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 57/185 (30.81%), Postives = 88/185 (47.57%), Query Frame = 2
Query:  113 SEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLS--------------------RKGQALN------------------LSKDHKPDLEVEKDRILKAGGFI----QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIE-LCDDDEFLVIACDGIWDCLSSQELVDFV 538
            S+E   ++F    SGSTA V +I D Q++ AN GDS+  L                     RK  + N                  L+KDH PD E E+ R+  AGG++     V RVNG L L+RAIGDV +K    +P         P+++  + L  +D FL+ + DG+++ ++ Q++ D +
Sbjct:  239 SKEALRNNFE---SGSTAAVILIVDGQIIAANVGDSKAFLCSESHDSSIDKKTSVVSGKRRRKRNSNNRDDFALANYDGPFYNVKELTKDHHPDREDERSRVEAAGGYVLEWAGVHRVNGELALSRAIGDVPYKRYGVIP--------TPELTEWQSLSANDTFLIASSDGVFEKMTMQDVCDLM 412          
BLAST of FC931677 vs. ExPASy Swiss-Prot
Match: PDP1_RAT ([Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Rattus norvegicus GN=Pdp1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 54/171 (31.58%), Postives = 82/171 (47.95%), Query Frame = 2
Query:  152 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQ-----ALNLSKDHKPDLEVEKDRIL------KAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIV--------------------------TANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLT 553
            SG+TACVA +    L VAN GDSR +L  + +     A+ LS DH    E E  R+       +A   ++  R+ G L   RA GDV+FK   S+  +K+++                          TA P+++   L   D+FLV+A DG+W+ +  Q++V  V + LT
Sbjct:  270 SGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKW--SIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLT 438          
BLAST of FC931677 vs. ExPASy Swiss-Prot
Match: P2C78_ORYSJ (Probable protein phosphatase 2C 78 OS=Oryza sativa subsp. japonica GN=Os12g0580900 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 53/157 (33.76%), Postives = 75/157 (47.77%), Query Frame = 2
Query:  155 GSTACVAIIRDKQLVVANAGDSRCVLSRKGQ------ALNLSKDHK-PDLEVEKDR----------ILKAGGFIQVGRVNGSLNLARAIGDVEFKLNK------------SLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFV 538
            GS   V  I D  L VAN GDSR VL R+G       A  LS DH   + EV K+           ++   G   V R+ G + ++R+IGDV  K  +            S+P ++ ++TA P I   +L   D FL+ A DG+W+ L+ +  VD V
Sbjct:  136 GSCCLVGAITDNVLYVANLGDSRAVLGRRGPDGREVVAERLSNDHNVAEEEVRKELTEQHPDDSRIVIYTRG---VWRIKGIIQVSRSIGDVYLKKPEFARDPIFRQYVCSIPLKRPVMTAEPSIKEHQLRQQDLFLIFASDGLWEQLTDKAAVDIV 289          
BLAST of FC931677 vs. ExPASy Swiss-Prot
Match: P2C05_ARATH (Probable protein phosphatase 2C 5 OS=Arabidopsis thaliana GN=At1g09160 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 50/141 (35.46%), Postives = 74/141 (52.48%), Query Frame = 2
Query:  143 GPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALN-LSKDHKPDLEV-EKDRILKAGGFIQVGRVN--------------GSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSS 517
            G TSG+T    II    + VA+ GDSRC+L  +G  ++ L+ DH+ +  V E++RI  +GG  +VGR+N              G L L+R+IGD +           + +   P +  ++L D    L+IA DGIWD LSS
Sbjct:  128 GETSGTTVTFVIIDGWTITVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERERITASGG--EVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDV---------GEFIVPIPHVKQVKLPDAGGRLIIASDGIWDILSS 257          
BLAST of FC931677 vs. ExPASy Swiss-Prot
Match: P2C75_ORYSJ (Probable protein phosphatase 2C 75 OS=Oryza sativa subsp. japonica GN=Os11g0417400 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.645e-12
Identity = 52/147 (35.37%), Postives = 76/147 (51.70%), Query Frame = 2
Query:  152 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQ-----ALNLSKDHKPDLEVEKDRILKAGGFI-------QVGRV------NGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFV 538
            SG+TA   I +   L+V N GDSR VL  + Q     A  L+ D KPD   E  RI +  G +        V R+      +  L +ARA GD   K       +  +++  PD++  ++ + DEF+V+A DG+WD LS+QE+VD V
Sbjct:  178 SGTTAVTLIKQGHDLIVGNLGDSRAVLGTRDQNDKLVAHQLTVDLKPDHPREARRIRRCNGRVFAHQDEPDVARLWLPNCNSPGLAMARAFGDFCLK-------DFGLISV-PDVTYRQITEKDEFIVLATDGVWDVLSNQEVVDVV 316          
BLAST of FC931677 vs. ExPASy Swiss-Prot
Match: P2C12_ARATH (Probable protein phosphatase 2C 12 OS=Arabidopsis thaliana GN=At1g47380 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.645e-12
Identity = 47/147 (31.97%), Postives = 77/147 (52.38%), Query Frame = 2
Query:  149 TSGSTACVAIIRDKQLVVANAGDSRCVLS-RKGQALNLSKDHKPDL-EVEKDRILKAGGFIQVGRVN--------------GSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVR 541
            TSG+T    I+    + VA+ GDSRC+L   +G    LS DH+ ++ E E+DR+  +GG  +VGR+N              G L L+R+IGD++           + +   P +  ++L      L+I+ DG+WD +S++E +D  R
Sbjct:  126 TSGTTVTFVIVEGWVVSVASVGDSRCILEPAEGGVYYLSADHRLEINEEERDRVTASGG--EVGRLNTGGGTEIGPLRCWPGGLCLSRSIGDLDVG---------EYIVPVPYVKQVKLSSAGGRLIISSDGVWDAISAEEALDCCR 261          
BLAST of FC931677 vs. ExPASy Swiss-Prot
Match: P2C15_ARATH (Probable protein phosphatase 2C 15 OS=Arabidopsis thaliana GN=At1g68410 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.260e-11
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 2
Query:  143 GPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQAL-NLSKDHK-PDLEVEKDRILKAGGFIQVGRVN--------------GSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQ 520
            G TSG+TA   I+    + VA  GDSRC+L  KG ++ NL+ DH+  D   E++R+  +GG  +VGR++              G L L+R+IGD++           + +   P +  ++L +    L+IA DGIWD LSS+
Sbjct:  133 GETSGTTATFVIVDGWTVTVACVGDSRCILDTKGGSVSNLTVDHRLEDNTEERERVTASGG--EVGRLSIVGGVEIGPLRCWPGGLCLSRSIGDMDV---------GEFIVPVPFVKQVKLSNLGGRLIIASDGIWDALSSE 263          
BLAST of FC931677 vs. ExPASy Swiss-Prot
Match: P2C74_ARATH (Probable protein phosphatase 2C 74 OS=Arabidopsis thaliana GN=At5g36250 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11
Identity = 50/147 (34.01%), Postives = 77/147 (52.38%), Query Frame = 2
Query:  152 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQ-----ALNLSKDHKPDLEVEKDRILKAGGFI-------QVGRV------NGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFV 538
            SG+TA   + + + LV+ N GDSR VL  + +        L++D KPD+  E +RI +  G I        V R+      +  L +ARA GD   K       +  +++  PD+S   L + DEF+V+A DGIWD L+++E+V  V
Sbjct:  206 SGTTAVTMVKQGQHLVIGNIGDSRAVLGVRNKDNKLVPFQLTEDLKPDVPAEAERIKRCRGRIFALRDEPGVARLWLPNHNSPGLAMARAFGDFCLK-------DFGLISV-PDVSYRRLTEKDEFVVLATDGIWDALTNEEVVKIV 344          
BLAST of FC931677 vs. ExPASy Swiss-Prot
Match: P2C66_ORYSJ (Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11
Identity = 52/147 (35.37%), Postives = 75/147 (51.02%), Query Frame = 2
Query:  152 SGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSK-----DHKPDLEVEKDRILKAGGFI-------QVGRV------NGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFV 538
            SGSTA   + +   LVV N GDSR ++  +  A NL+      D KP+L  E  RI +  G +       +V RV      +  L +ARA GD   K       +  +++  P IS   L + DEF+++A DG+WD LS++E VD V
Sbjct:  223 SGSTAVTLVKQGLDLVVGNLGDSRAIMGTRDAANNLTAVQLTVDLKPNLPREAARIQQCRGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLK-------DYGLISV-PQISYRRLTEKDEFIILATDGVWDVLSNKEAVDIV 361          
The following BLAST results are available for this feature:
BLAST of FC931677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
PDP1_BOVIN4.329e-1231.58[Pyruvate dehydrogenase [acetyl-transferring]]-pho... [more]
P2C76_ORYSJ4.329e-1230.81Putative protein phosphatase 2C 76 OS=Oryza sativa... [more]
PDP1_RAT7.385e-1231.58[Pyruvate dehydrogenase [acetyl-transferring]]-pho... [more]
P2C78_ORYSJ7.385e-1233.76Probable protein phosphatase 2C 78 OS=Oryza sativa... [more]
P2C05_ARATH7.385e-1235.46Probable protein phosphatase 2C 5 OS=Arabidopsis t... [more]
P2C75_ORYSJ9.645e-1235.37Probable protein phosphatase 2C 75 OS=Oryza sativa... [more]
P2C12_ARATH9.645e-1231.97Probable protein phosphatase 2C 12 OS=Arabidopsis ... [more]
P2C15_ARATH1.260e-1134.51Probable protein phosphatase 2C 15 OS=Arabidopsis ... [more]
P2C74_ARATH2.149e-1134.01Probable protein phosphatase 2C 74 OS=Arabidopsis ... [more]
P2C66_ORYSJ2.149e-1135.37Probable protein phosphatase 2C 66 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionC34107G08EF PostHarvP1 Citrus clementina cDNA clone C34107G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931677 ID=FC931677; Name=FC931677; organism=Citrus clementina; type=EST; length=689bp
GAGAGAATTAGCTATACTGGGAGATAAAATGGACAAGTTTTCTGGCATGA
TTGAGGGGTTCATATGGTCTCCTAAGGGTGGTGAAGCCAATGATCATTTT
GACGATTGGGCATCGGAGGAGGGTCCTCACTCAGATTTTCATGGACCAAC
TTCTGGAAGTACAGCTTGCGTAGCAATCATTAGAGACAAGCAACTCGTGG
TTGCAAATGCTGGTGATTCTCGTTGTGTGTTATCGAGGAAGGGCCAGGCA
CTTAATCTATCTAAAGACCATAAGCCTGATCTTGAGGTTGAGAAAGATAG
AATTCTCAAAGCTGGTGGTTTTATACAAGTTGGACGTGTTAATGGAAGTT
TAAATTTGGCGAGAGCTATTGGAGATGTGGAGTTCAAGCTAAACAAAAGT
TTGCCTGCTGAAAAACAGATTGTGACTGCCAATCCTGATATAAGTACTAT
TGAACTTTGTGATGATGATGAGTTTCTTGTCATAGCTTGTGATGGGATTT
GGGATTGCCTTTCAAGTCAAGAACTTGTCGATTTTGTCAGGGATCAATTA
ACCAACGAAACAAAACTATCAGTCATTTGCGAGAAAGTATTCGATCGGTG
CTTGGCTCCATCAGCTGGTGGTGAAGGATGCGACAACATGACCATGATCT
TGGTTCAGTTTAAAATCTTTCTAATATGGTCCTTCTGCG
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