FC931678
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_ACIF2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=dxr PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.289e-19 Identity = 50/130 (38.46%), Postives = 78/130 (60.00%), Query Frame = 1 Query: 331 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE-EKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 717 I +LG+TGSIG TLD+V+ H D+FR+VAL + + ++ P++V + +++ L + +K ++ +G + + EAAR V+ IVG AGL PT+AA+EAGK + LANKE L+ G Sbjct: 7 ICILGATGSIGKSTLDVVSRHPDQFRIVALTGNHRVAEMQLLCQQHHPELVVMAAPEAAQQLRVGLGDAGLKKIQVESGPEALAEAARMSGVDEVMAAIVGAAGLLPTLAAVEAGKKVYLANKECLVMAG 136
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_LEPIC (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=dxr PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19 Identity = 48/132 (36.36%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 331 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV 726 + +LG++GS+G TL ++ + +KFR+ + + SN+ + K F P + V ++ + L N + +IL GE + E R P+ V+T IVG GL+PT+AAI AGK + +ANKETL+ GP + Sbjct: 5 VCLLGASGSVGESTLKVLRAYPEKFRLHSFSVHSNLEKAKEIQKEFSPDFICVSSDFADVGV---LGNKLGRTQILYGESSLCELVREPEVEIVITAIVGSVGLRPTIAAITAGKRLGIANKETLVTSGPLI 133
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_CLOTE (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium tetani GN=dxr PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.021e-19 Identity = 48/134 (35.82%), Postives = 80/134 (59.70%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV 726 K I +LG+TGSIGTQTL+++ E ++ ++ A +A + + ++ F+P+ V++ ++ ++KE + E+L G +G+ A V+T +VG GL+PT+ AI KDIALANKETL+ G + Sbjct: 2 KNICILGATGSIGTQTLEVIREEKENLKLYAASANKSSEKIISIIEEFEPKYVSMTDKEAFLKVKEFCMKNNKNTEVLYGIEGMNTIASLDKVDIVLTSVVGMIGLEPTLKAIRNKKDIALANKETLVVAGEII 135
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_VIBPA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Vibrio parahaemolyticus GN=dxr PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.178e-18 Identity = 45/129 (34.88%), Postives = 79/129 (61.24%), Query Frame = 1 Query: 331 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 717 +++LG+TGSIG TL +V ++ + F VVALAAG+N+ + ++++P+ + +++ ++ + + E+L G + A + +V+ IVG AGL PT+AA++AGK + LANKE L+ G Sbjct: 4 LTILGATGSIGASTLKVVEQNPELFSVVALAAGTNVEKMVALCRQWQPKFAVMADKAAAVALQSEIHTISPNTEVLGGVDALCHVASLEEVDSVMAAIVGAAGLLPTMAAVKAGKRVLLANKEALVMSG 132
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_VIBHB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=dxr PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.178e-18 Identity = 45/129 (34.88%), Postives = 80/129 (62.02%), Query Frame = 1 Query: 331 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 717 +++LG+TGSIG TL +V ++ + F +VALAA +N+ + ++++P+ + +++ ++ LA+V E+L G + + + +V+ IVG AGL PT+AA++AGK + LANKE L+ G Sbjct: 4 LTILGATGSIGASTLKVVEQNPELFSIVALAASTNVEKMVALCRKWQPKYAVMADKAAALALQSELASVSPSTEVLGGVDALCHVSALEEVDSVMAAIVGAAGLLPTMAAVKAGKRVLLANKEALVMSG 132
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_JANSC (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Jannaschia sp. (strain CCS1) GN=dxr PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.178e-18 Identity = 54/140 (38.57%), Postives = 78/140 (55.71%), Query Frame = 1 Query: 322 PKP----ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 P+P +S+ G+TGSIG T+D++A + + VVAL NI LA +R + E LL +++ AL E AGE ++EAA P A +++ IVG AGL P A+ G +ALANKE+L+ GP +L Sbjct: 3 PRPEKRRVSIFGATGSIGQNTIDLIARAPEAYDVVALTGARNIAQLAADARRLSASIAVTAEEELLPDLRAALEG--SGVEAAAGEAALLEAADRP-ADWIMSAIVGAAGLAPGFRALRHGTTLALANKESLVTAGPLLL 139
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_HAHCH (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Hahella chejuensis (strain KCTC 2396) GN=dxr PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.178e-18 Identity = 50/129 (38.76%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 331 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 717 ++VLG+TGSIG TLD++A H D++ + A A SN+ L + +P+ + ++ L K+ L + E+ G + + EA+ D VV IVG AGL PT+AA+ +GK I LANKE L+ G Sbjct: 4 VTVLGATGSIGRSTLDVMARHPDRYELYAATAHSNLNELFSICIKHRPRYAILATDAGLAGFKKRLRDAGVSTEVRVGVEAMCEASSASDVDVVVAAIVGAAGLVPTLAAVNSGKRILLANKEALVMTG 132
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_ELUMP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Elusimicrobium minutum (strain Pei191) GN=dxr PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.178e-18 Identity = 56/136 (41.18%), Postives = 80/136 (58.82%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL-AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 K I VLGSTGSIG +LD++ + + V+AL+A +N LL Q+ +FKP+ VAV NE ++K V E ++L E +I A P A ++ G+VG G P V AI+ GK IALANKE ++ G ++ Sbjct: 2 KNIVVLGSTGSIGVSSLDVIDKLGAGYGVLALSANTNADLLIKQMLKFKPRFVAVLNEDSYQKVK---PYVPENTKLLPPDEDSLIFLASLPSADLIINGLVGAVGFMPLVTAIKNGKTIALANKEPIVMAGKSIM 134
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_ARTCA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=dxr PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.178e-18 Identity = 61/142 (42.96%), Postives = 79/142 (55.63%), Query Frame = 1 Query: 322 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVVAVRNES------LLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV 726 P+ I++LGSTGSIGTQ +D+V F VVAL+AG N+ LLA Q V + L+DE A +PEI+AG A DA V+ GI G GL PT+AA+++G +ALANKE+LI GG V Sbjct: 3 PRRIAILGSTGSIGTQAIDVVDGAPHLFEVVALSAGGGNLALLARQAVHTGAAAVGIAAGDPRELAVLIDEAAAAAGRSGYRPEIIAGPDASTRIAGL-DADVVLNGITGSIGLAPTLAALKSGATLALANKESLIVGGSLV 143
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_AERS4 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Aeromonas salmonicida (strain A449) GN=dxr PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.178e-18 Identity = 47/131 (35.88%), Postives = 75/131 (57.25%), Query Frame = 1 Query: 337 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 +LG++GSIG TL ++ + +++V+AL A ++ + F P+ + +E+ + L +L+G+ + E A HPDA +V+ IVG AGL PT+AA+ AGK I LANKE L+ G F + Sbjct: 6 ILGASGSIGQSTLKVLRRNPGRWQVLALTAARSVDAMVRDCLEFSPRFAVMVDEAAATALAGQLKTHGSATRVLSGQAALCEVAAHPDAHSVMAAIVGAAGLAPTMAAVRAGKRILLANKEALVMSGAFFM 136 The following BLAST results are available for this feature:
BLAST of FC931678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 429
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931678 ID=FC931678; Name=FC931678; organism=Citrus clementina; type=EST; length=729bpback to top |