FC931678
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_CUPTR (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=dxr PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.637e-18 Identity = 49/129 (37.98%), Postives = 69/129 (53.49%), Query Frame = 1 Query: 331 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 717 I++LG+TGSIG TLD++ H ++ AL+A + LADQ F+P V E++ L + E+ GE + A V+ IVG AGL+PT+AA AGK + LANKE L+ G Sbjct: 4 ITILGATGSIGESTLDVIRRHPGRYAAHALSAHRQVRKLADQCIEFRPARAVVGTAEAARELETLLRDASVATEVSYGEAALESIAADAQTDAVMAAIVGAAGLRPTLAAARAGKRVLLANKEALVMSG 132
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_CHLMU (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Chlamydia muridarum GN=dxr PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.637e-18 Identity = 53/135 (39.26%), Postives = 79/135 (58.52%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV 726 K ++++GSTGSIG Q L ++ E D F + LAA G N L Q++ F P+VVAVR+E+ E+++ ++E IL+GE+G+I A + G L +A+I+ K IALANKE+L+A G V Sbjct: 2 KRLALIGSTGSIGKQVLQVIREIPDAFVIETLAAYGRNRESLISQIREFSPRVVAVRDETTYKELRKLFPHIE----ILSGEEGLIAVATAASVDMTIVASSGIDALPAVMASIQERKTIALANKESLVAAGELV 132
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_RUTMC (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=dxr PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17 Identity = 48/131 (36.64%), Postives = 76/131 (58.02%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 717 K I++LG+TGSIG TL +V H DKF + L+A +N L+ + +++P + +ES +++ + +IL+G Q + + H D V+ IVG AG+ + A++AGK I LANKE+LI G Sbjct: 2 KNITLLGATGSIGKSTLSVVDLHSDKFNIFTLSANTNWQLMLELCNKYQPNYAIMVDESSAEKLSTIITT---DTQILSGTQALDKVVAHQDTDFVMAAIVGTAGMSSALCAVKAGKRIMLANKESLILAG 129
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_RHOSK (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=dxr PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17 Identity = 52/137 (37.96%), Postives = 78/137 (56.93%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEH--EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 + +S+ G+TGSIG T D+V + FR VAL G NI LA+ + K ++ +E L ++EALA E+ G Q + EAA P A ++ IVG AGL P + A++ G+ +ALANKE+L+ G ++ Sbjct: 2 RSLSIFGATGSIGESTFDLVMRKGGPEAFRTVALTGGRNIRRLAEMARALKAELAVTAHEDCLPALREALAGTGT--EVAGGAQAIAEAADRP-ADWTMSAIVGAAGLVPGMRALKHGRTLALANKESLVTAGQLLM 135
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_RHOS5 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=dxr PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17 Identity = 51/137 (37.23%), Postives = 78/137 (56.93%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEH--EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 + +S+ G+TGSIG T D+V + FR VAL G N+ LA+ + K ++ +E L ++EALA E+ G Q + EAA P A ++ IVG AGL P + A++ G+ +ALANKE+L+ G ++ Sbjct: 2 RSLSIFGATGSIGESTFDLVMRKGGPEAFRTVALTGGRNVARLAEMARALKAELAVTAHEECLPALREALAG--SGTEVAGGTQAIAEAADRP-ADWTMSAIVGAAGLVPGMRALKHGRTLALANKESLVTAGQLLM 135
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_RHOS4 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dxr PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17 Identity = 52/137 (37.96%), Postives = 78/137 (56.93%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEH--EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 + +S+ G+TGSIG T D+V + FR VAL G NI LA+ + K ++ +E L ++EALA E+ G Q + EAA P A ++ IVG AGL P + A++ G+ +ALANKE+L+ G ++ Sbjct: 2 RSLSIFGATGSIGESTFDLVMRKGGPEAFRTVALTGGRNIRRLAEMARALKAELAVTAHEDCLPALREALAGTGT--EVAGGAQAIAEAADRP-ADWTMSAIVGAAGLVPGMRALKHGRTLALANKESLVTAGQLLM 135
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_RHOS1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=dxr PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17 Identity = 52/137 (37.96%), Postives = 78/137 (56.93%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEH--EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 + +S+ G+TGSIG T D+V + FR VAL G NI LA+ + K ++ +E L ++EALA E+ G Q + EAA P A ++ IVG AGL P + A++ G+ +ALANKE+L+ G ++ Sbjct: 2 RSLSIFGATGSIGESTFDLVMRKGGPEAFRTVALTGGRNIRRLAEMARALKAELAVTAHEDCLPALREALAGTGT--EVAGGAQAIAEAADRP-ADWTMSAIVGAAGLVPGMRALKHGRTLALANKESLVTAGQLLM 135
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_AGRRK (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=dxr PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.701e-17 Identity = 56/131 (42.75%), Postives = 72/131 (54.96%), Query Frame = 1 Query: 331 ISVLGSTGSIGTQTLDIVAE--HEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 717 +++LGSTGSIG TLD++A+ D F + A+ NI LLA Q K + NE +K+ALA AG +IEAA P V+ IVG AGL PT+ A G DIALANKE L++ G Sbjct: 11 LTILGSTGSIGQNTLDVIAQLGGRDAFEIAAITGHDNIDLLASQAKACGAALAVTANEDRYQALKDALAGTGIAAA--AGRNALIEAASIPSD-WVMAAIVGTAGLAPTLEAARRGADIALANKECLVSAG 138
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_RHIE6 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Rhizobium etli (strain CIAT 652) GN=dxr PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17 Identity = 56/139 (40.29%), Postives = 79/139 (56.83%), Query Frame = 1 Query: 322 PKPISVLGSTGSIGTQTLDIVAEH---EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 P+ +S+ GSTGSIG TL++V EH D F + L N+ LLA Q K ++ ++ D +K AL+ + +G+ G++EAA +A V+ IVG AGL PT+AA G DIALANKE L++ G L Sbjct: 8 PRRLSIFGSTGSIGRNTLNVV-EHLGGRDNFEISVLTGNGNVELLARQAKASGARLAVTASDRHYDSLKSALSG--SGIAVASGKSGLMEAA-DCEADWVMAAIVGTAGLAPTLAAARRGADIALANKECLVSAGDLFL 142
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_PARDP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Paracoccus denitrificans (strain Pd 1222) GN=dxr PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.790e-17 Identity = 54/137 (39.42%), Postives = 77/137 (56.20%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIV--AEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 + ISVLG+TGS+G D++ A ++FR VAL G+N+ LA + + ++ L +++ ALA E AG Q V EAA P A ++ IVG AGL P + + G +ALANKETL+A GP V+ Sbjct: 2 RSISVLGATGSVGESAFDLLMGAGGPERFRTVALTGGANVARLAQMARALRAELAVTAWPERLADLRAALAG--SGIEAAAGPQAVAEAAARP-ADWTLSAIVGAAGLPPGLEVLNRGGTLALANKETLVAAGPLVM 135 The following BLAST results are available for this feature:
BLAST of FC931678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 429
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931678 ID=FC931678; Name=FC931678; organism=Citrus clementina; type=EST; length=729bpback to top |