FC931678
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_RHIL3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=dxr PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.473e-16 Identity = 52/135 (38.52%), Postives = 76/135 (56.30%), Query Frame = 1 Query: 322 PKPISVLGSTGSIGTQTLDIVAEH---EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 717 P+ +S+ GSTGSIG TL++V +H + F + L N+ LLA Q K ++ N+ + +K L+ + +G+ G++EAA D V+ IVG AGL PT+AA G DIALANKE L++ G Sbjct: 8 PRRLSIFGSTGSIGQNTLNVV-DHLGGRENFEISVLTGSGNVELLARQAKSSGARLAVTANDRHYESLKSELSGTGIA--VASGKSGLMEAADR-DVDWVMAAIVGTAGLAPTLAAARRGADIALANKECLVSAG 138
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_RALME (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dxr PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.473e-16 Identity = 48/129 (37.21%), Postives = 69/129 (53.49%), Query Frame = 1 Query: 331 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 717 I++LG+TGSIG TLD+V H D++ V AL+A + LA F+P V + E++ L E+ GE + A V+ IVG AGL+ ++AA AGK + LANKE+L+ G Sbjct: 4 ITILGATGSIGESTLDVVRRHPDRYSVHALSAHRQVDKLAAACVEFRPARAVVGSAEAARELEAKLRAAGVPTEVSYGETALESIAEDAGTDAVMAAIVGAAGLRSSLAAARAGKRVLLANKESLVMSG 132
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_PSYIN (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Psychromonas ingrahamii (strain 37) GN=dxr PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.473e-16 Identity = 44/131 (33.59%), Postives = 75/131 (57.25%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 717 K +++LG+TGSIG TL + + + +++ LAA S++ + + F P V++ +E +++ L +L EQ ++E +V+ IVG AGLK T+AA++AGK++ LANKE L+ G Sbjct: 2 KKLAILGATGSIGDSTLSVCRSNPELYQITLLAASSSVDKMLALCREFTPLYVSMSSEISAKKLRGLLKRNNLSCHVLDDEQRLLELLASDHVDSVMAAIVGAAGLKTTLAAVDAGKEVFLANKEALVMSG 132
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_EHRCR (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Ehrlichia chaffeensis (strain Arkansas) GN=dxr PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.148e-16 Identity = 53/136 (38.97%), Postives = 75/136 (55.15%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG-KDIALANKETLIAGGPFVL 729 K +S+ GSTG+IG +DI+ DK++V L A SN+ LLA Q K + V + N L E+K+ L K + AG+ G++ A D + IVG A L P I +G K IALANKE+++ GG +L Sbjct: 2 KTVSIFGSTGAIGQMIIDIIFADLDKYQVKVLVAKSNVQLLAFQAKLINAERVVIANVDLYQELKDLLVGTNIK--VSAGDSGMV-MATSLDVDYAMMAIVGMAALIPMTYLINSGIKVIALANKESIVCGGTLLL 134
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_XANCP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Xanthomonas campestris pv. campestris GN=dxr PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.335e-16 Identity = 46/129 (35.66%), Postives = 69/129 (53.49%), Query Frame = 1 Query: 331 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 717 ++V G+TGSIG LD++A H ++ R L+AGS + L +P + + +L +++ L + AG+Q + A TVV IVG AGL T+AA AGK + LANKE+L+ G Sbjct: 9 VAVFGATGSIGASALDVIARHPERLRASVLSAGSKVDALLALCVLHRPAHAVIADAALYPALRDGLRAAGLTTQAHAGDQALDALAASDACDTVVAAIVGAAGLSSTLAAAAAGKRLLLANKESLVLAG 137
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_XANC8 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=dxr PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.335e-16 Identity = 46/129 (35.66%), Postives = 69/129 (53.49%), Query Frame = 1 Query: 331 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 717 ++V G+TGSIG LD++A H ++ R L+AGS + L +P + + +L +++ L + AG+Q + A TVV IVG AGL T+AA AGK + LANKE+L+ G Sbjct: 9 VAVFGATGSIGASALDVIARHPERLRASVLSAGSKVDALLALCVLHRPAHAVIADAALYPALRDGLRAAGLTTQAHAGDQALDALAASDACDTVVAAIVGAAGLSSTLAAAAAGKRLLLANKESLVLAG 137
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_SHEAM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=dxr PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.335e-16 Identity = 44/127 (34.65%), Postives = 74/127 (58.27%), Query Frame = 1 Query: 337 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 717 +LG+TGSIG TLD++ + +++R AL A +++ + D +P+ + +ES + +AL E+ +G++ ++ + TV+ IVG AGL PT+AA+ AGK + LANKE L+ G Sbjct: 6 ILGATGSIGKSTLDVIKRNPERYRAFALVAATSVERMRDLCIEHRPRYAHMVDESAAKRLADALPT-GLGIEVSSGDEALLGLVTAAEVDTVMAAIVGAAGLLPTLAAVRAGKRVLLANKEALVMSG 131
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_RHIEC (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=dxr PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.335e-16 Identity = 51/135 (37.78%), Postives = 77/135 (57.04%), Query Frame = 1 Query: 322 PKPISVLGSTGSIGTQTLDIVAEH---EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 717 P+ +S+ GSTGSIG TL+++ EH + F + L N+ LLA Q + ++ ++ + +K L+ + +G+ G++EAA DA V+ IVG AGL PT+AA G DIALANKE L++ G Sbjct: 8 PRRLSIFGSTGSIGRNTLNVI-EHLGGRENFEISVLTGNGNVELLARQARSSGARLAVTASDRHYESLKRELSG--SGIAVASGKSGLMEAADR-DADWVMAAIVGTAGLAPTLAAARRGADIALANKECLVSAG 138
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_MYCLE (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Mycobacterium leprae GN=dxr PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.335e-16 Identity = 55/135 (40.74%), Postives = 75/135 (55.56%), Query Frame = 1 Query: 331 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI--TLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 + VLGSTGSIGTQ L+++A + D+F VV LAAG TLL + V N ++ D+ LA + P G V +A V+ +VG GL+PT+AA+ G +ALANKE+L+AGG VL Sbjct: 15 VLVLGSTGSIGTQALEVIAANPDRFEVVGLAAGGAQLDTLLRQRA------ATGVTNIAIADDRAAQLAG--DIP--YHGTDAVTRLVEETEADVVLNALVGALGLRPTLAALHTGARLALANKESLVAGGSLVL 139
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_MYCLB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Mycobacterium leprae (strain Br4923) GN=dxr PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.335e-16 Identity = 55/135 (40.74%), Postives = 75/135 (55.56%), Query Frame = 1 Query: 331 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI--TLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 + VLGSTGSIGTQ L+++A + D+F VV LAAG TLL + V N ++ D+ LA + P G V +A V+ +VG GL+PT+AA+ G +ALANKE+L+AGG VL Sbjct: 15 VLVLGSTGSIGTQALEVIAANPDRFEVVGLAAGGAQLDTLLRQRA------ATGVTNIAIADDRAAQLAG--DIP--YHGTDAVTRLVEETEADVVLNALVGALGLRPTLAALHTGARLALANKESLVAGGSLVL 139 The following BLAST results are available for this feature:
BLAST of FC931678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 429
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931678 ID=FC931678; Name=FC931678; organism=Citrus clementina; type=EST; length=729bpback to top |