FC931678
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_BACHD (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacillus halodurans GN=dxr PE=3 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 5.099e-30 Identity = 70/135 (51.85%), Postives = 95/135 (70.37%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALAN-VEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV 726 K ISVLG+TGSIGTQTLD++A H DKFR+VA++ G N+TL +Q+ +FKP +V+V + DE ++ LA+ V E ++ GE+G+IE A A +V ++G GL PT+AAIEA K IALANKETL+ G V Sbjct: 2 KGISVLGATGSIGTQTLDVLANHRDKFRLVAMSVGKNLTLAEEQIHQFKPPLVSV----MTDEDRKTLASKVPEGTRVVCGEEGLIEVATAEKAEILVNAVIGSVGLAPTLAAIEAKKTIALANKETLVTAGHLV 132
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_CHLTE (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Chlorobium tepidum GN=dxr PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.659e-30 Identity = 69/134 (51.49%), Postives = 90/134 (67.16%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV 726 K +S+LGSTGSIG TLD+V H ++F + ALA G ++ +L Q+ F+P +V+VR+E+ + +K L + KPEIL G +G E A A VV+ IVG AGL PTV AIEAGKDIALANKETL+ G V Sbjct: 2 KSLSILGSTGSIGLSTLDVVRRHPERFSIAALAEGHDVEMLLKQIDEFRPSLVSVRDEASRERLKGMLG--DHKPEILCGLEGAAEVAAVDGADMVVSAIVGAAGLVPTVRAIEAGKDIALANKETLVVAGQLV 133
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_STRCO (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Streptomyces coelicolor GN=dxr PE=3 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 1.483e-29 Identity = 73/142 (51.41%), Postives = 94/142 (66.20%), Query Frame = 1 Query: 316 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKRFKPQVVAVRNESLLDEIKEALA----NVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV 726 DGPK + VLGSTGSIGTQ +D+V + D+FRV AL+A G + LLA+Q R K + VAV E ++ ++EAL E PEILAG + + A D TV+ GI G GL PT+AA+EAG+ +ALANKE+LI GGP V Sbjct: 21 DGPKDVVVLGSTGSIGTQAIDLVLRNPDRFRVTALSANGGRVALLAEQAYRLKARTVAVAREDVVPALREALTAQYGTGEPLPEILAGPEAATQLAAS-DCHTVLNGITGSIGLAPTLAALEAGRTLALANKESLIVGGPLV 161
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_PROVI (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=dxr PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.483e-29 Identity = 67/134 (50.00%), Postives = 92/134 (68.66%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV 726 + +S+LGSTGSIG TLD+V H++ F VV LA G ++ LA+Q+K F+P +V+VR+E+ DE+K L ++PEI+ G +G A + VV+ IVG AGL PT+ AI+AGKDIALANKETL+ G V Sbjct: 2 RALSILGSTGSIGLSTLDVVRRHKESFSVVGLAEGHDVHALAEQIKEFRPTIVSVRDENAADELK-TLLGPADRPEIVHGIEGAGTVAAAEGSDMVVSAIVGAAGLTPTIKAIKAGKDIALANKETLVVAGQLV 134
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_GEOSM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacter sp. (strain M21) GN=dxr PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.483e-29 Identity = 68/135 (50.37%), Postives = 91/135 (67.41%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 K +++LGSTGSIG TLD+VA + D FRVVAL AG+N+ LL Q++ F+P++V+V + +L +KPEI+ G +G+I AA + VV IVG AGL PT AAI AGKD+ALANKETL+ G V+ Sbjct: 2 KNLTILGSTGSIGVSTLDVVAAYPDMFRVVALTAGNNLELLKTQIETFRPELVSVLTAEKAQALSRSLTG--KKPEIMHGVEGMIAAATASETTMVVAAIVGAAGLVPTTAAIMAGKDVALANKETLVTAGHLVM 134
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_PELPD (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pelobacter propionicus (strain DSM 2379) GN=dxr PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.637e-29 Identity = 69/131 (52.67%), Postives = 89/131 (67.94%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 717 K +S+LGSTGSIG TL+IVA H D+FRV AL AG N+ LLA Q+++F P++ AV + + + + +E K I+ G +G+IEAA + VV IVG AGL PT AAI AGKDIALANKETL+ G Sbjct: 2 KQLSILGSTGSIGVSTLEIVAAHPDRFRVSALTAGKNLELLARQIRQFSPRIAAVAAKEDVPRLAQLCDGLEVK--IVGGVEGLIEAATADETDMVVAAIVGAAGLVPTAAAIRAGKDIALANKETLVTAG 130
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_GEOLS (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=dxr PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.616e-29 Identity = 67/131 (51.15%), Postives = 90/131 (68.70%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 717 K I++LGSTGSIG TL+IVA H DKFRV++L+ N+ LLA Q+++F+P++ AV + + + +KE L+ VE E+ G +G+ AA P VV IVG AGL PT AAI AG D+ALANKETL+ G Sbjct: 2 KQIAILGSTGSIGVSTLEIVAAHPDKFRVLSLSGAKNLDLLARQIRQFRPRLAAVADPADIPRLKELLSGVE--VELTGGVEGLCAAATAPGVQMVVAAIVGAAGLVPTAAAIRAGIDVALANKETLVTAG 130
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_GEOBB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=dxr PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.640e-28 Identity = 67/135 (49.63%), Postives = 88/135 (65.19%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 K +++LGSTGSIG TLD+V + D FRVVAL AG+N+ LL Q++ F P +V+V + +L +KPEI+ G +G+I AA + VV IVG AGL PT AAI AGKD+ALANKETL+ G V+ Sbjct: 2 KNLTILGSTGSIGVSTLDVVKAYPDMFRVVALTAGNNLELLKTQIETFSPDLVSVLTAEKAQALSRSLTG--KKPEIMHGVEGMIAAATASETTMVVAAIVGAAGLVPTTAAIMAGKDVALANKETLVTAGHLVM 134
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_CHLL2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=dxr PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.654e-28 Identity = 66/134 (49.25%), Postives = 88/134 (65.67%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV 726 K +S+LGSTGSIG TLD+V +H KF + LA G ++ LL +Q+ F+P VV+VR+ + D++++ L KPEI G +G A A VV+ IVG AGL PTV+AI+AGK IALANKETL+ G V Sbjct: 2 KALSILGSTGSIGLSTLDVVRQHPGKFTITGLAEGHDVGLLNEQINEFRPDVVSVRDAASADQLRKLLGT--HKPEIFYGIEGAATVAAAEGAEMVVSAIVGAAGLVPTVSAIKAGKHIALANKETLVVAGQLV 133
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_EXIS2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=dxr PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.233e-28 Identity = 61/135 (45.19%), Postives = 92/135 (68.15%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 K +S++G TGSIGTQTLD++A + D+F++V+ A G NI + + R +P++VAV +E++ ++++ L + P +L GE G+I A A V+T +VG GL+PT+AAIEAGK I LANKETL+ G V+ Sbjct: 2 KQVSIIGGTGSIGTQTLDVIAANPDRFQLVSFAFGKNIEVALPWLNRLRPELVAVLDETVKEQLEAVL---DYSPTVLVGEDGLIAVATADQADIVITAVVGAVGLRPTLAAIEAGKSIGLANKETLVTAGHLVM 133 The following BLAST results are available for this feature:
BLAST of FC931678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 429
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931678 ID=FC931678; Name=FC931678; organism=Citrus clementina; type=EST; length=729bpback to top |