FC931678
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_CLOPE (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium perfringens GN=dxr PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.005e-26 Identity = 61/135 (45.19%), Postives = 87/135 (64.44%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 K IS+LG TGSIGTQTLD++ H++ F +V + A NI L D +K F P+ VA+ +E ++ + + + K E++ G +G+++ A + VVT +VG GLKPTV AI GKDIALANKETL+ G V+ Sbjct: 2 KRISILGVTGSIGTQTLDVLRFHKEDFELVGITANRNIELTLDIIKEFSPKYVAINHEESYKKLVDLVKSEGLKCEVIYGMEGLVKVATLDEIDIVVTSVVGMIGLKPTVEAIRKGKDIALANKETLVVAGELVM 136
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_CLOP1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=dxr PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.005e-26 Identity = 61/135 (45.19%), Postives = 87/135 (64.44%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 K IS+LG TGSIGTQTLD++ H++ F +V + A NI L D +K F P+ VA+ +E ++ + + + K E++ G +G+++ A + VVT +VG GLKPTV AI GKDIALANKETL+ G V+ Sbjct: 2 KRISILGVTGSIGTQTLDVLRFHKEDFELVGITANRNIELTMDIIKEFSPKYVAINHEESYKKLVDLVKSQGLKCEVIYGMEGLVKVATLDEIDIVVTSVVGMIGLKPTVEAIRKGKDIALANKETLVVAGELVM 136
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_LAWIP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=dxr PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.420e-26 Identity = 61/135 (45.19%), Postives = 87/135 (64.44%), Query Frame = 1 Query: 322 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV 726 P+ IS+LGSTGSIGT LD++ H++ F +VAL G N+ LLA Q ++KP +AV++E+ + + L + KP I G+QG ++ A P+ TV++ VG AGL TVAA + GK I LANKETL+ G + Sbjct: 18 PRTISILGSTGSIGTNALDVIKSHKELFHIVALGGGKNVQLLAKQAIQWKPDYLAVQDETSKEALIPLLP-INYKPSIFVGQQGYVKLASLPEVTTVLSAQVGAAGLHGTVAAAKNGKVICLANKETLVLAGKLI 151
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_EUBR3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=dxr PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.420e-26 Identity = 65/135 (48.15%), Postives = 92/135 (68.15%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 K IS+LGSTGSIGTQTLD++ EH D +VVAL+ G N++L+ Q + FKPQ V+V +E+ +++ +LA+ + E+ G G+I A VVT IVG G++PT+AAI+A K IALANKETL+ G ++ Sbjct: 2 KKISILGSTGSIGTQTLDVIREHGD-MQVVALSCGRNLSLIEKQAREFKPQFVSVSDENDAKKLRTSLADTDI--EVGYGMDGLIRCATIEPCDIVVTAIVGMLGIRPTIAAIKAKKTIALANKETLVTAGHIII 133
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_CLOD6 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium difficile (strain 630) GN=dxr PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.420e-26 Identity = 66/136 (48.53%), Postives = 92/136 (67.65%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL-ANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 K IS+LGSTGSIG QTLD+V ++ DKF +VA++A SNI LL +Q+ FKP+ V V E+ ++KE L N+E E+LAG +G+ + + ++T +VG GL PT+ AI+ G DIALANKETL+ G V+ Sbjct: 2 KKISILGSTGSIGKQTLDVVRDNRDKFEIVAISANSNIELLLEQIVEFKPKYVTVFEENKALKLKEMLPKNIE--IEVLAGMEGLKIISSLDEVDVLLTAVVGMIGLVPTLCAIKKGIDIALANKETLVTAGELVM 135
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_GEOKA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacillus kaustophilus GN=dxr PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.834e-26 Identity = 65/135 (48.15%), Postives = 84/135 (62.22%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 K IS+LG++GSIGTQTLD++ H D+FR+ A + G NI + F P +VAV + D K + I+ GE+G+IEAA P A VVT +VG GL PT+ AIEAGK IALANKETL+ G V+ Sbjct: 2 KYISILGASGSIGTQTLDVIRAHPDEFRLAAASVGKNIEAARRLIAEFSPSLVAVADR---DAYKVLYREYRGRTTIVYGEEGLIEAAVCPQADVVVTAVVGSVGLVPTLKAIEAGKAIALANKETLVVAGHLVM 133
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_HAEDU (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Haemophilus ducreyi GN=dxr PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.619e-26 Identity = 59/131 (45.04%), Postives = 84/131 (64.12%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG 717 K I +LG+TGSIG TL ++ + D+++V AL G N+ L+A Q +FKP+ A+ +E + E L + ++L GEQ + E A HPDA V+ IVG AGL PT+AA++AGK I LANKE+L+ G Sbjct: 2 KNIVILGATGSIGQSTLSVIEHNPDQYQVFALVGGKNVELMATQCSQFKPKFAALVDEKAAKLLAEQLKALNLTTQVLTGEQAICELAAHPDANIVMAAIVGAAGLLPTLAAVKAGKQILLANKESLVTCG 132
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_CLOPS (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium perfringens (strain SM101 / Type A) GN=dxr PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.619e-26 Identity = 60/135 (44.44%), Postives = 87/135 (64.44%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 K IS+LG TGSIGTQTLD++ H++ F +V + A NI L D +K F P+ VA+ +E ++ + + + K E++ G +G+++ A + VVT +VG GLKPTV AI GK+IALANKETL+ G V+ Sbjct: 2 KRISILGVTGSIGTQTLDVLRFHKEDFELVGITANRNIELTMDIIKEFSPKYVAINHEESYKKLVDLVKSEGLKCEVIYGMEGLVKVATLDEIDIVVTSVVGMIGLKPTVEAIRKGKNIALANKETLVVAGELVM 136
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_THETN (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermoanaerobacter tengcongensis GN=dxr PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.951e-26 Identity = 61/135 (45.19%), Postives = 94/135 (69.63%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 K + +LGSTGSIG QTLD+V +++F +V L +N++LL+ Q+K F+P+VVAV++E +++E N++E E+L G++G+ E ++ +A VV + G AGL PTV AI+ GK+IALANKE L+ G V+ Sbjct: 2 KKLIILGSTGSIGRQTLDVVRSLKEEFEIVGLTGYNNVSLLSKQIKEFRPKVVAVKDEEKARKLRE---NLDEPIEVLTGKEGLKEIVKY-EADMVVVAVEGIAGLIPTVEAIKLGKNIALANKEVLVTAGEIVM 132
BLAST of FC931678 vs. ExPASy Swiss-Prot
Match: DXR_BACSK (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacillus clausii (strain KSM-K16) GN=dxr PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.951e-26 Identity = 60/135 (44.44%), Postives = 93/135 (68.89%), Query Frame = 1 Query: 325 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVL 729 K IS+LGSTGSIGTQTLD++ ++ D+F + ALA G+N+ L +Q+K F+P++V+V+ ++ + + E L GE+G+ E AR+ ++ VVT I G GL PT++AI+A K +A+ANKETL++ G V+ Sbjct: 2 KQISLLGSTGSIGTQTLDVIRDYPDQFTLSALACGTNLELCRNQIKEFQPKLVSVQRP---EDAQTLAGEFGDSIEFLYGEEGLKEVARYSESDIVVTAITGSIGLLPTLSAIKAKKAVAIANKETLVSAGHLVV 133 The following BLAST results are available for this feature:
BLAST of FC931678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 429
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931678 ID=FC931678; Name=FC931678; organism=Citrus clementina; type=EST; length=729bpback to top |