FC931683

Overview
NameFC931683
Unique NameFC931683
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length675
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig26 contig Ccv1_Contig26:939..1613. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH60_ALTMD (60 kDa chaperonin OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=groL PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.189e-59
Identity = 120/217 (55.30%), Postives = 157/217 (72.35%), Query Frame = 2
Query:    5 VEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAI 655
            VE +N  +LLVDKKI+N R+L+  LE   +   P++IIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L DIAILTGGTVI +E+GL L+KV  E LG A +VV+ KD TT+V     Q+A+  R AQI+  IE +  DY++EKL ER+AKLSGGVAVI+VGA TE E+KEKK RVEDAL+AT+AA            L+R ++K+  +
Sbjct:  213 VELDNPFILLVDKKISNIRELLPTLEGVAKAGKPLMIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEIGLELEKVQLEDLGTAKRVVINKDNTTVVDGNGDQEAIEGRCAQIKGQIEESSSDYDKEKLQERLAKLSGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVPGGGVALVRAAAKLSEL 429          
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH602_VIBC3 (60 kDa chaperonin 2 OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=groL2 PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.189e-59
Identity = 120/218 (55.05%), Postives = 159/218 (72.94%), Query Frame = 2
Query:    2 AVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAI 655
            +VE +N  +LLVDKKI+N R+L+ VLE   + + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L DIAILTGG VI +E+GL L+K   E LG A +V +TK+ +TI+     Q A+  RVAQIR  IE A  DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA            L+R +SK+ ++
Sbjct:  212 SVELDNPFILLVDKKISNIRELLPVLEGVAKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGVVISEEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALIRAASKLSSL 429          
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH601_VIBPA (60 kDa chaperonin 1 OS=Vibrio parahaemolyticus GN=groL1 PE=3 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 1.189e-59
Identity = 121/215 (56.28%), Postives = 158/215 (73.49%), Query Frame = 2
Query:    2 AVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKV 646
            +VE EN  +LLVDKKI+N R+L+  LE   + + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L DIAILTGGTVI +E+GL L+KV  E LG A +V +TK+ +TI+     +  +  RVAQIR  IE+A  DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA            L+R +SK+
Sbjct:  212 SVELENPFILLVDKKISNIRELLPTLEAVAKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEIGLELEKVTLEDLGQAKRVSITKENSTIIDGAGEEAMIQGRVAQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALIRAASKI 426          
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH601_VIBCH (60 kDa chaperonin 1 OS=Vibrio cholerae GN=groL1 PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.189e-59
Identity = 120/218 (55.05%), Postives = 159/218 (72.94%), Query Frame = 2
Query:    2 AVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAI 655
            +VE +N  +LLVDKKI+N R+L+ VLE   + + P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L DIAILTGG VI +E+GL L+K   E LG A +V +TK+ +TI+     Q A+  RVAQIR  IE A  DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA            L+R +SK+ ++
Sbjct:  212 SVELDNPFILLVDKKISNIRELLPVLEGVAKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGVVISEEIGLELEKATLEDLGQAKRVSITKENSTIIDGAGDQAAIQGRVAQIRQQIEEATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALIRAASKLSSL 429          
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH60_ENTGE (60 kDa chaperonin (Fragment) OS=Enterobacter gergoviae GN=groL PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.552e-59
Identity = 121/219 (55.25%), Postives = 157/219 (71.69%), Query Frame = 2
Query:    2 AVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIK 658
            AVE ++  +LL DKKI+N R+L+ VLE   +   P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L DIA LT GTVI +E+G+ L+K   E LG A +VV+ KDTTTI+     + A+  RV QIR  IE A  DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA            L+R++SK+  +K
Sbjct:  212 AVELDSPFILLADKKISNIRELLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTAGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEVAIQGRVTQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKITELK 430          
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH60_VIBHB (60 kDa chaperonin OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=groL PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.028e-59
Identity = 120/215 (55.81%), Postives = 157/215 (73.02%), Query Frame = 2
Query:    2 AVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKV 646
            +VE EN  +LL+DKK++N R+L+  LE   + + P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L DIAILTGG VI +EVGL L+KV  E LG A +V +TK+ TTI+     +  +  RVAQIR  IE+A  DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA            L+R +SK+
Sbjct:  212 SVELENPFILLIDKKVSNIRELLPALEAVAKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGIVISEEVGLELEKVALEDLGQAKRVAITKENTTIIDGMGEEAMIQGRVAQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALIRAASKI 426          
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH60_BUCCC (60 kDa chaperonin OS=Buchnera aphidicola subsp. Cinara cedri GN=groL PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.028e-59
Identity = 116/217 (53.46%), Postives = 159/217 (73.27%), Query Frame = 2
Query:    5 VEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAI 655
            VE EN  +L+VDKKI+N R+L+ +LE   + + P+LII+ED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L DI+ILTGG+VI +E+ + L+K   E LG A +VV+ KDTTTI+     ++A+  R++QIR  I  A  DY++EKLNER+AKLSGGVAV++VGA TE E+KEKK RVEDAL+AT+AA            L+R++ K+  I
Sbjct:  213 VELENPYILMVDKKISNIRELLPILEAVAKSSKPLLIISEDLEGEALATLVVNSMRGIVKVAAVKAPGFGDRRKAMLQDISILTGGSVISEELAMDLEKSSLEDLGQAKRVVINKDTTTIIDGNGNKEAIKSRISQIRQEINEATSDYDKEKLNERLAKLSGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVAEKISRI 429          
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH60_SHEFN (60 kDa chaperonin OS=Shewanella frigidimarina (strain NCIMB 400) GN=groL PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.648e-59
Identity = 114/219 (52.05%), Postives = 162/219 (73.97%), Query Frame = 2
Query:    2 AVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIK 658
            ++E ++  +LLVDKK++N R+L+ +LE   +   P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L D+AILTGGTVI +E+GL L+K   E LG A +V++TKD TTI+     Q  +S RV+QI+  +E++  DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA            L+R++SK+  ++
Sbjct:  212 SIELDSPFILLVDKKVSNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVIITKDNTTIIDGSGDQVQISARVSQIKQQVEDSTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVASKIKDVE 430          
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH60_SHEB5 (60 kDa chaperonin OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=groL PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.648e-59
Identity = 116/219 (52.97%), Postives = 161/219 (73.52%), Query Frame = 2
Query:    2 AVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIK 658
            +VE ++  +LLVDKKI+N R+L+ +LE   +   P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L D+AILTGGTVI +E+GL L+K   E LG A +VV+TKD TTI+     Q  ++ RV+QI+  +E +  DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA            L+R++SK+  ++
Sbjct:  212 SVELDHPFVLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQTQIAARVSQIKQQVEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVASKIAEVE 430          
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH60_SERP5 (60 kDa chaperonin OS=Serratia proteamaculans (strain 568) GN=groL PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.648e-59
Identity = 118/219 (53.88%), Postives = 157/219 (71.69%), Query Frame = 2
Query:    2 AVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIK 658
            ++E E+  +LL DKKI+N R+++ VLE   +   P+LIIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L DIA LTGGTVI +E+GL L+K   E LG A ++V+ KDTT I+     + A+  RV+QIR  IE A  DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA            L+R +SK+  ++
Sbjct:  212 SIELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGLELEKTTLEDLGTAKRIVINKDTTIIIDGNGEEPAIQGRVSQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRAASKLSELR 430          
The following BLAST results are available for this feature:
BLAST of FC931683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_ALTMD1.189e-5955.3060 kDa chaperonin OS=Alteromonas macleodii (strain... [more]
CH602_VIBC31.189e-5955.0560 kDa chaperonin 2 OS=Vibrio cholerae serotype O1... [more]
CH601_VIBPA1.189e-5956.2860 kDa chaperonin 1 OS=Vibrio parahaemolyticus GN=... [more]
CH601_VIBCH1.189e-5955.0560 kDa chaperonin 1 OS=Vibrio cholerae GN=groL1 PE... [more]
CH60_ENTGE1.552e-5955.2560 kDa chaperonin (Fragment) OS=Enterobacter gergo... [more]
CH60_VIBHB2.028e-5955.8160 kDa chaperonin OS=Vibrio harveyi (strain ATCC B... [more]
CH60_BUCCC2.028e-5953.4660 kDa chaperonin OS=Buchnera aphidicola subsp. Ci... [more]
CH60_SHEFN2.648e-5952.0560 kDa chaperonin OS=Shewanella frigidimarina (str... [more]
CH60_SHEB52.648e-5952.9760 kDa chaperonin OS=Shewanella baltica (strain OS... [more]
CH60_SERP52.648e-5953.8860 kDa chaperonin OS=Serratia proteamaculans (stra... [more]

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Properties
Property NameValue
Genbank descriptionC34107H02EF PostHarvP1 Citrus clementina cDNA clone C34107H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931683 ID=FC931683; Name=FC931683; organism=Citrus clementina; type=EST; length=675bp
GGCAGTTGAATATGAGAACTGCAAGTTGCTTCTTGTGGATAAAAAGATTA
CCAATGCAAGGGACCTTATCAACGTTTTGGAAGATGCGATTAGAGGTGCA
TACCCAATTTTGATTATTGCAGAAGATATTGAGCAAGAAGCACTGGCAAC
TCTTGTCGTGAACAAGCTGAGAGGTGCATTGAAGATTGCTGCTCTTAAAG
CTCCTGGTTTTGGAGAGCGCAAGAGCCAGTACCTTGACGACATTGCTATT
TTGACTGGAGGAACTGTAATCAGAGATGAGGTGGGACTTGCCTTGGACAA
AGTTGGCAAGGAGGTCCTAGGTAATGCTTCTAAAGTTGTGCTCACAAAGG
ATACCACCACCATTGTGGGGGATGGCAGCACCCAGGATGCAGTGAGCAAA
CGAGTGGCGCAAATCAGAACTCTAATTGAGAACGCTGAGCAAGACTATGA
AAGGGAGAAGCTTAATGAAAGAATTGCTAAACTGTCAGGTGGTGTTGCTG
TCATACAGGTTGGAGCTCAAACTGAGACAGAGCTTAAAGAGAAGAAGTTG
AGAGTCGAAGATGCTCTTAATGCAACAAAGGCTGCAGTTGAGGAAGGTAT
CGTAGTTGGTGGCGGATGTACTCTACTGAGACTCTCATCTAAGGTGGATG
CCATTAAGGAAACCCCTTGATATGA
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