FC931683

Overview
NameFC931683
Unique NameFC931683
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length675
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig26 contig Ccv1_Contig26:939..1613. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH60_PECCP (60 kDa chaperonin OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=groL PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.459e-59
Identity = 119/218 (54.59%), Postives = 158/218 (72.48%), Query Frame = 2
Query:    2 AVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAI 655
            AVE E+  +LL DKKI+N R+++ VLE   +   P++I+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L DIA LTGGTVI +E+GL L+K   E LG A +VV+ KDTTTI+     + A+  RVAQIR  +E A  DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL AT+AA            L+R+++K+ ++
Sbjct:  212 AVELESPFILLADKKISNIREMLPVLEAVAKAGKPLVIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGTGEEAAIQGRVAQIRQQVEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALAATRAAVEEGVVAGGGVALVRVAAKLASL 429          
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH60_KLEP7 (60 kDa chaperonin OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=groL PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.459e-59
Identity = 119/215 (55.35%), Postives = 157/215 (73.02%), Query Frame = 2
Query:    2 AVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKV 646
            AVE E+  +LL DKKI+N R+++ VLE   +   P++IIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L DIA LTGGTVI +E+G+ L+K   E LG A +VV+ KDTTTI+     + A+  RVAQIR  IE A  DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RV+DAL+AT+AA            L+R+++K+
Sbjct:  212 AVELESPFILLADKKISNIREMLPVLEAVAKAGKPLVIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEESAIQGRVAQIRKQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVDDALHATRAAVEEGVVAGGGVALVRVAAKL 426          
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH60_KLEP3 (60 kDa chaperonin OS=Klebsiella pneumoniae (strain 342) GN=groL PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.459e-59
Identity = 119/215 (55.35%), Postives = 157/215 (73.02%), Query Frame = 2
Query:    2 AVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKV 646
            AVE E+  +LL DKKI+N R+++ VLE   +   P++IIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L DIA LTGGTVI +E+G+ L+K   E LG A +VV+ KDTTTI+     + A+  RVAQIR  IE A  DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RV+DAL+AT+AA            L+R+++K+
Sbjct:  212 AVELESPFILLADKKISNIREMLPVLEAVAKAGKPLVIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEESAIQGRVAQIRKQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVDDALHATRAAVEEGVVAGGGVALVRVAAKL 426          
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH60_ENTAE (60 kDa chaperonin (Fragment) OS=Enterobacter aerogenes GN=groL PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.459e-59
Identity = 119/215 (55.35%), Postives = 157/215 (73.02%), Query Frame = 2
Query:    2 AVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKV 646
            AVE E+  +LL DKKI+N R+++ VLE   +   P++IIAED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L DIA LTGGTVI +E+G+ L+K   E LG A +VV+ KDTTTI+     + A+  RVAQIR  IE A  DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RV+DAL+AT+AA            L+R+++K+
Sbjct:  212 AVELESPFILLADKKISNIREMLPVLEAVAKAGKPLVIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRKQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVDDALHATRAAVEEGVVAGGGVALVRVAAKI 426          
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH60_COXBR (60 kDa chaperonin OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=groL PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.459e-59
Identity = 118/219 (53.88%), Postives = 158/219 (72.15%), Query Frame = 2
Query:    2 AVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIK 658
            + E EN  +LLVDKKI+N R+LI +LE+  +   P+L+IAEDIE EALATLVVN +RG +K+AA+KAPGFG+R+   L DIA+LTGG VI +EVGL+L+    + LG+A +VV+TKD TTI+        +  RV QIR  IEN+  DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA            L+R+   +D+++
Sbjct:  212 SAELENPFILLVDKKISNIRELIPLLENIAKSGRPLLVIAEDIEGEALATLVVNNIRGVVKVAAVKAPGFGDRRKAMLQDIAVLTGGKVISEEVGLSLEAASLDDLGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALIRVLKSLDSVE 430          
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH60_BUCAP (60 kDa chaperonin OS=Buchnera aphidicola subsp. Schizaphis graminum GN=groL PE=3 SV=3)

HSP 1 Score: 228.024 bits (580), Expect = 3.459e-59
Identity = 114/218 (52.29%), Postives = 158/218 (72.48%), Query Frame = 2
Query:    5 VEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIK 658
            VE EN  +L+ DKKI+N R+++ +LE   +   P+LII+ED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L DI+ILTGG+VI +E+ + L+K   E LG A +VV+ KDTTTI+G    + A+  R+ QIR  I+ A  DY++EKLNER+AKLSGGVAV++VGA TE E+KEKK RVEDAL+AT+AA            L+R++ K+  ++
Sbjct:  213 VELENPYILMADKKISNVREMLPILESVAKSGKPLLIISEDLEGEALATLVVNSMRGIVKVAAVKAPGFGDRRKAMLQDISILTGGSVISEELAMDLEKSTLEDLGQAKRVVINKDTTTIIGGSGEKQAIQSRIGQIRQEIQEATSDYDKEKLNERLAKLSGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVAGKISNLR 430          
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH60_SHESW (60 kDa chaperonin OS=Shewanella sp. (strain W3-18-1) GN=groL PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.517e-59
Identity = 117/215 (54.42%), Postives = 158/215 (73.49%), Query Frame = 2
Query:    2 AVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKV 646
            +VE ++  +LLVDKKI+N R+L+ +LE   +   P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L D+AILTGGTVI +E+GL L+K   E LG A +VV+TKD TTI+     Q  +  RV+QI+  IE +  DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA            L+R++SK+
Sbjct:  212 SVELDHPFVLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVASKI 426          
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH60_SHESR (60 kDa chaperonin OS=Shewanella sp. (strain MR-7) GN=groL PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.517e-59
Identity = 117/215 (54.42%), Postives = 158/215 (73.49%), Query Frame = 2
Query:    2 AVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKV 646
            +VE ++  +LLVDKKI+N R+L+ +LE   +   P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L D+AILTGGTVI +E+GL L+K   E LG A +VV+TKD TTI+     Q  +  RV+QI+  IE +  DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA            L+R++SK+
Sbjct:  212 SVELDHPFVLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVASKI 426          
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH60_SHESM (60 kDa chaperonin OS=Shewanella sp. (strain MR-4) GN=groL PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.517e-59
Identity = 117/215 (54.42%), Postives = 158/215 (73.49%), Query Frame = 2
Query:    2 AVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKV 646
            +VE ++  +LLVDKKI+N R+L+ +LE   +   P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L D+AILTGGTVI +E+GL L+K   E LG A +VV+TKD TTI+     Q  +  RV+QI+  IE +  DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA            L+R++SK+
Sbjct:  212 SVELDHPFVLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVASKI 426          
BLAST of FC931683 vs. ExPASy Swiss-Prot
Match: CH60_SHESA (60 kDa chaperonin OS=Shewanella sp. (strain ANA-3) GN=groL PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.517e-59
Identity = 117/215 (54.42%), Postives = 158/215 (73.49%), Query Frame = 2
Query:    2 AVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKV 646
            +VE ++  +LLVDKKI+N R+L+ +LE   +   P+LI+AED+E EALATLVVN +RG +K+AA+KAPGFG+R+   L D+AILTGGTVI +E+GL L+K   E LG A +VV+TKD TTI+     Q  +  RV+QI+  IE +  DY++EKL ER+AKL+GGVAVI+VGA TE E+KEKK RVEDAL+AT+AA            L+R++SK+
Sbjct:  212 SVELDHPFVLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVASKI 426          
The following BLAST results are available for this feature:
BLAST of FC931683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_PECCP3.459e-5954.5960 kDa chaperonin OS=Pectobacterium carotovorum su... [more]
CH60_KLEP73.459e-5955.3560 kDa chaperonin OS=Klebsiella pneumoniae subsp. ... [more]
CH60_KLEP33.459e-5955.3560 kDa chaperonin OS=Klebsiella pneumoniae (strain... [more]
CH60_ENTAE3.459e-5955.3560 kDa chaperonin (Fragment) OS=Enterobacter aerog... [more]
CH60_COXBR3.459e-5953.8860 kDa chaperonin OS=Coxiella burnetii (strain RSA... [more]
CH60_BUCAP3.459e-5952.2960 kDa chaperonin OS=Buchnera aphidicola subsp. Sc... [more]
CH60_SHESW4.517e-5954.4260 kDa chaperonin OS=Shewanella sp. (strain W3-18-... [more]
CH60_SHESR4.517e-5954.4260 kDa chaperonin OS=Shewanella sp. (strain MR-7) ... [more]
CH60_SHESM4.517e-5954.4260 kDa chaperonin OS=Shewanella sp. (strain MR-4) ... [more]
CH60_SHESA4.517e-5954.4260 kDa chaperonin OS=Shewanella sp. (strain ANA-3)... [more]

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Properties
Property NameValue
Genbank descriptionC34107H02EF PostHarvP1 Citrus clementina cDNA clone C34107H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931683 ID=FC931683; Name=FC931683; organism=Citrus clementina; type=EST; length=675bp
GGCAGTTGAATATGAGAACTGCAAGTTGCTTCTTGTGGATAAAAAGATTA
CCAATGCAAGGGACCTTATCAACGTTTTGGAAGATGCGATTAGAGGTGCA
TACCCAATTTTGATTATTGCAGAAGATATTGAGCAAGAAGCACTGGCAAC
TCTTGTCGTGAACAAGCTGAGAGGTGCATTGAAGATTGCTGCTCTTAAAG
CTCCTGGTTTTGGAGAGCGCAAGAGCCAGTACCTTGACGACATTGCTATT
TTGACTGGAGGAACTGTAATCAGAGATGAGGTGGGACTTGCCTTGGACAA
AGTTGGCAAGGAGGTCCTAGGTAATGCTTCTAAAGTTGTGCTCACAAAGG
ATACCACCACCATTGTGGGGGATGGCAGCACCCAGGATGCAGTGAGCAAA
CGAGTGGCGCAAATCAGAACTCTAATTGAGAACGCTGAGCAAGACTATGA
AAGGGAGAAGCTTAATGAAAGAATTGCTAAACTGTCAGGTGGTGTTGCTG
TCATACAGGTTGGAGCTCAAACTGAGACAGAGCTTAAAGAGAAGAAGTTG
AGAGTCGAAGATGCTCTTAATGCAACAAAGGCTGCAGTTGAGGAAGGTAT
CGTAGTTGGTGGCGGATGTACTCTACTGAGACTCTCATCTAAGGTGGATG
CCATTAAGGAAACCCCTTGATATGA
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