FC931684

Overview
NameFC931684
Unique NameFC931684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ACIBC (Glutamate 5-kinase OS=Acinetobacter baumannii (strain ACICU) GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 73/221 (33.03%), Postives = 107/221 (48.42%), Query Frame = 2
Query:   23 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLY-SGPPSEPNSKLIHTYIRAKHQAEITF-GDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            +Q+ +L++ G EIILVSSGAV  G  R++    + S   DL   Q      ACAA+GQ  L+  + ++     + ++Q+L+T  D  D        D +Q+L+D RVIP+ NEND VST +         F DND+                 +D +G++ S P   P++KL+ T +RA         G    +GRGGM  KV         G P +I SG
Sbjct:   43 KQIADLHNAGHEIILVSSGAVAEGMVRMK----LASRPTDLPSLQ------ACAAIGQMGLIHTWSSVLENHSIRTAQVLLTHDDLADRRRYLNSCDALQNLIDWRVIPVINENDTVSTDEIR-------FGDNDTLAAMVAGQVHADLLIILTDQQGMFDSDPRHNPDAKLLST-VRAMDDVLFEMAGGGGVLGRGGMVTKVRAARLAAKSGCPTLIASG 245          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ACIB5 (Glutamate 5-kinase OS=Acinetobacter baumannii (strain AB0057) GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 73/221 (33.03%), Postives = 107/221 (48.42%), Query Frame = 2
Query:   23 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLY-SGPPSEPNSKLIHTYIRAKHQAEITF-GDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            +Q+ +L++ G EIILVSSGAV  G  R++    + S   DL   Q      ACAA+GQ  L+  + ++     + ++Q+L+T  D  D        D +Q+L+D RVIP+ NEND VST +         F DND+                 +D +G++ S P   P++KL+ T +RA         G    +GRGGM  KV         G P +I SG
Sbjct:   43 KQIADLHNAGHEIILVSSGAVAEGMVRMK----LASRPTDLPSLQ------ACAAIGQMGLIHTWSSVLENHSIRTAQVLLTHDDLADRRRYLNSCDALQNLIDWRVIPVINENDTVSTDEIR-------FGDNDTLAAMVAGQVHADLLIILTDQQGMFDSDPRHNPDAKLLST-VRAMDDVLFEMAGGGGVLGRGGMVTKVRAARLAAKSGCPTLIASG 245          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ACIB3 (Glutamate 5-kinase OS=Acinetobacter baumannii (strain AB307-0294) GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 73/221 (33.03%), Postives = 107/221 (48.42%), Query Frame = 2
Query:   23 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLY-SGPPSEPNSKLIHTYIRAKHQAEITF-GDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            +Q+ +L++ G EIILVSSGAV  G  R++    + S   DL   Q      ACAA+GQ  L+  + ++     + ++Q+L+T  D  D        D +Q+L+D RVIP+ NEND VST +         F DND+                 +D +G++ S P   P++KL+ T +RA         G    +GRGGM  KV         G P +I SG
Sbjct:   43 KQIADLHNAGHEIILVSSGAVAEGMVRMK----LASRPTDLPSLQ------ACAAIGQMGLIHTWSSVLENHSIRTAQVLLTHDDLADRRRYLNSCDALQNLIDWRVIPVINENDTVSTDEIR-------FGDNDTLAAMVAGQVHADLLIILTDQQGMFDSDPRHNPDAKLLST-VRAMDDVLFEMAGGGGVLGRGGMVTKVRAARLAAKSGCPTLIASG 245          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_THEEB (Glutamate 5-kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=proB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20
Identity = 76/227 (33.48%), Postives = 104/227 (45.81%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAE-ITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            +  L+E L     +G  ++LVSSGAVGVG  RL             ++PQ     +A AAVGQ  LM +YD LF+ L    +Q+LVT  +F D      +Y+T Q+L +L VIPI NEND V+  +         F DND+                 +DV+ LYS  P  +  +  I   +     A+ I  G   S  G GGM  K+         G+  VIT G
Sbjct:   27 IAQLVEVLCHCQRRGDRVVLVSSGAVGVGAMRLGLT----------ERPQQLAQKQAVAAVGQGHLMRMYDDLFAVLRQPIAQILVTRQNFVDRQSYLNIYNTFQALFELGVIPIVNENDTVAVDELK-------FGDNDTLSALVASLVEADWLFLLTDVDRLYSADPRIDKTAVPIERVVSLAELAQTIQVGSAGSPWGTGGMATKIRAAEIATEAGVRTVITDG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_SYNPX (Glutamate 5-kinase OS=Synechococcus sp. (strain WH8102) GN=proB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20
Identity = 73/217 (33.64%), Postives = 101/217 (46.54%), Query Frame = 2
Query:   44 SQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-----SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            ++G  ++LVSSGAVG+G QRL+            Q+P+  +  +A AA GQ  LMALY+   +   +  +Q+LVT SD  D    +    T+Q LL   V+P+ NENDA+S  +         F DND+                 +DV+ LYS  P     + P S + H   R     E   GD  R GRGGMT K+         GI V +  G
Sbjct:   33 ARGDRVVLVSSGAVGLGCQRLQLP----------QRPETVVALQAAAATGQGQLMALYERALANHGIAVAQILVTRSDLADRRRYQNASGTLQQLLQWGVLPVVNENDAISPAELR-------FGDNDTLSALVAAAVGADQLILLTDVDRLYSADPRLVVDARPISDVHHP--RELDALEAVAGDGGRWGRGGMTTKLAAARIATASGITVHLADG 230          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_SHEWM (Glutamate 5-kinase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=proB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20
Identity = 73/223 (32.74%), Postives = 107/223 (47.98%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLY-SGPPSEPNSKLIHTYIRAKHQ-AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L  Q+  L   G E++L +SGA+  GR+ L Y KL ++ +A+ Q           AAVGQS L+  +  LFS   +   QLL+T +D  D +      D++ +LL+  +IPI NENDAV+T +           DND+                 +D +GL+ S P S P++KLI   +       ++  G  S +G GGM  K+         GI VVI SG
Sbjct:   35 LARQMSALMKAGVEVVLCTSGAIAAGREHLGYPKLADT-VANKQ---------LLAAVGQSQLILAWSQLFSIYGLHVGQLLLTQADLHDRERYLNARDSLNALLNNGIIPIINENDAVATNEIK-------VGDNDNLSARAALLCHADLLILLTDQQGLFDSDPRSNPDAKLIKQVVNIDDSLRQLAGGAVSGLGTGGMATKLEAADIARRAGIEVVIASG 240          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_DEHSC (Glutamate 5-kinase OS=Dehalococcoides sp. (strain CBDB1) GN=proB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20
Identity = 71/233 (30.47%), Postives = 107/233 (45.92%), Query Frame = 2
Query:    5 RLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAE-ITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            R+  L  Q+ EL   G EI++VSSGA+  GR ++  R +          P++    +  AA+GQS LM  YD LFS   +T +Q L+T SD  D        +T+ +L++L +I I NEND V    A  E     F DND+                 +++ GLY+  P+  P + LI        + E +  G  +++G GGM  K+         G+  +I  G   D I
Sbjct:   29 RMADLCRQIAELTRLGTEIVIVSSGAIAAGRSKMGIRHI----------PKDVPFKQVLAAIGQSQLMNYYDQLFSPHGLTVAQGLLTKSDLSDRSGYLNARNTLLALMELGIITIVNENDVV----AIDEIQQAKFGDNDNLSAMVANLIEADLLLILTNIRGLYTSDPTLHPEATLITEVKEITEELEQLAAGSSNKLGTGGMVTKLEAARLATSSGVTAIIADGHIPDII 247          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_DEHSB (Glutamate 5-kinase OS=Dehalococcoides sp. (strain BAV1) GN=proB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20
Identity = 71/233 (30.47%), Postives = 107/233 (45.92%), Query Frame = 2
Query:    5 RLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAE-ITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            R+  L  Q+ EL   G EI++VSSGA+  GR ++  R +          P++    +  AA+GQS LM  YD LFS   +T +Q L+T SD  D        +T+ +L++L +I I NEND V    A  E     F DND+                 +++ GLY+  P+  P + LI        + E +  G  +++G GGM  K+         G+  +I  G   D I
Sbjct:   29 RMADLCRQIAELTRLGTEIVIVSSGAIAAGRSKMGIRHI----------PKDVPFKQVLAAIGQSQLMNYYDQLFSPHGLTVAQGLLTKSDLSDRSGYLNARNTLLALMELGIITIVNENDVV----AIDEIQQAKFGDNDNLSAMVANLIEADLLLILTNIRGLYTSDPTLHPEATLITEVKEITEELEQLAAGSSNKLGTGGMVTKLEAARLATSSGVTAIIADGHIPDII 247          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_CYAP7 (Glutamate 5-kinase OS=Cyanothece sp. (strain PCC 7424) GN=proB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20
Identity = 75/228 (32.89%), Postives = 110/228 (48.25%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIR----AKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            + AL+E L +L + G++++LVSSGAVGVG  RL  +          ++P++    +A AAVGQ  L+ +YD LF+ L    +Q+L+T  +  D       Y+T  +L +L VIPI NEND V+  +         F DND+                 +DV+ LYS  P    +    T++     A  Q E   G  S  G GGMT K+         G+ +VIT G
Sbjct:   27 IAALVETLTKLKTSGYQVVLVSSGAVGVGCGRLSRK----------ERPKDIAMKQAIAAVGQGRLIRVYDDLFNTLGQPIAQILLTRRELIDRRSYVNAYNTFAALFELGVIPIVNENDTVAVEELN-------FGDNDTLSALVANLIEANWLFLLTDVDRLYSADPRLVPTAQPITFVNPSDFAHLQVEAGSGG-SGWGTGGMTTKLAAARIATSAGVRMVITHG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_SYNP2 (Glutamate 5-kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=proB PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.393e-20
Identity = 73/227 (32.16%), Postives = 109/227 (48.02%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSE-PNSKLIHTYIRAK-HQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            +G L+E L  L  +G  +ILVSSGAVGVG   L+            ++P+   + +A AAVGQ  L+ LYD LF+ L    +Q+L+T  D  D      + + + ++LDL VIPI NEND V+  +         F DND+                 +DV+ LYS  P + P+++ I     ++    ++  G   S+ G GGM  K+         G+  VIT G
Sbjct:   27 IGTLVETLTRLKQKGHRVILVSSGAVGVGCGVLKRS----------ERPKKIAEKQAIAAVGQGRLIRLYDDLFTSLQQAIAQVLLTRRDLVDRTSYLTVQEALNAMLDLSVIPIVNENDTVAVDELK-------FGDNDTLSALVASLVNADWLVLLTDVDRLYSADPRQNPDARPIPLVSSSELFNLQVDAGSSGSQWGTGGMQTKLTAARIATSAGVRTVITQG 236          
The following BLAST results are available for this feature:
BLAST of FC931684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 446
Match NameE-valueIdentityDescription
PROB_ACIBC1.989e-2033.03Glutamate 5-kinase OS=Acinetobacter baumannii (str... [more]
PROB_ACIB51.989e-2033.03Glutamate 5-kinase OS=Acinetobacter baumannii (str... [more]
PROB_ACIB31.989e-2033.03Glutamate 5-kinase OS=Acinetobacter baumannii (str... [more]
PROB_THEEB2.598e-2033.48Glutamate 5-kinase OS=Thermosynechococcus elongatu... [more]
PROB_SYNPX2.598e-2033.64Glutamate 5-kinase OS=Synechococcus sp. (strain WH... [more]
PROB_SHEWM2.598e-2032.74Glutamate 5-kinase OS=Shewanella woodyi (strain AT... [more]
PROB_DEHSC2.598e-2030.47Glutamate 5-kinase OS=Dehalococcoides sp. (strain ... [more]
PROB_DEHSB2.598e-2030.47Glutamate 5-kinase OS=Dehalococcoides sp. (strain ... [more]
PROB_CYAP72.598e-2032.89Glutamate 5-kinase OS=Cyanothece sp. (strain PCC 7... [more]
PROB_SYNP23.393e-2032.16Glutamate 5-kinase OS=Synechococcus sp. (strain AT... [more]

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Properties
Property NameValue
Genbank descriptionC34107H03EF PostHarvP1 Citrus clementina cDNA clone C34107H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931684 ID=FC931684; Name=FC931684; organism=Citrus clementina; type=EST; length=698bp
GGGAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAGGAGTTAAATTCTCAAG
GCTTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAA
AGGCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAA
GCCGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTA
GTCTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCA
TCCCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAA
GCAACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTA
TTTTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGAT
TCTTCTGGTATATTTTGGGATAATGACAGTCTGGCAGGATTATTGGCTTT
GGAACTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGCCTCT
ATAGTGGTCCTCCAAGTGAGCCAAATTCGAAGCTGATCCATACATATATA
AGAGCAAAACACCAAGCAGAAATAACATTTGGAGACAAGTCAAGGGTTGG
AAGAGGGGGAATGACTGCTAAGGTCAATGCAGCTTATTGTGCAGCTTGCG
CCGGTATCCCTGTTGTTATTACTAGTGGCTTTGCCATGGACAGCATCA
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